RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 A0A0U1RQS6 177 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 A0A1B0GUL7 405 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 FAM90A10PA6NDY2 464 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MCIDASD6RGH6 385 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 F5H697 171 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 KLK8O60259 260 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 RANBP6O60518 1105 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PRAMEF2O60811 474 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CSDE1O75534 798 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 KDM4BO94953 1096 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SPDEFO95238 335 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ACSL3O95573 720 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 KRT14P02533 472 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SPP1P10451 314 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CREB1P16220 341 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CETN2P41208 172 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 STAT6P42226 847 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MAGEA1P43355 309 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 JAK3P52333 1124 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ADPRHP54922 357 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PPP2R2BQ00005 443 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 HSF2Q03933 536 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DMWDQ09019 674 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TOB2Q14106 344 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 STXBP2Q15833 593 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 KRT24Q2M2I5 525 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 FSCBQ5H9T9 825 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PHYHD1Q5SRE7 291 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 NCR3LG1Q68D85 454 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 FBXO46Q6PJ61 603 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 B3GLCTQ6Y288 498 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM26Q6ZUK4 368 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MDGA2Q7Z553 956 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 NANOGNBQ7Z5D8 188 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TBC1D26Q86UD7 250 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MISPQ8IVT2 679 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 LAS2Q8IYD9 372 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF276Q8N554 614 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ZCCHC9Q8N567 271 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 STKLD1Q8NE28 680 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 FAM71CQ8NEG0 241 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SOCS4Q8WXH5 440 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SPDL1Q96EA4 605 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SLC41A3Q96GZ6 507 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MAGED4Q96JG8 741 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 GPR78Q96P69 363 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DDOQ99489 341 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CDK19Q9BWU1 502 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TOR3AQ9H497 397 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SYNDIG1Q9H7V2 258 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 MAGEF1Q9HAY2 307 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CHMP1AQ9HD42 196 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 BPIFA1Q9NP55 256 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ARPP21Q9UBL0 812 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 GMEB1Q9Y692 573 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CEPT1Q9Y6K0 416 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SPATA31A3Q5VYP0 1347 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF541Q9H0D2 1346 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 A0A0U1RQV5 110 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TCRBV7S3A2A0A539 114 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CPED1A4D0V7 1026 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 OR6C74A6NCV1 312 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 HELTA6NFD8 242 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SLC15A5A6NIM6 579 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DUXAA6NLW8 204 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 HSPB2A8KAH6 182 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CSO75390 466 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 VPS26AO75436 327 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PMPCBO75439 489 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CNTN5O94779 1100 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 NUDT3O95989 172 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 AGTP01019 485 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 GH2P01242 217 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 GCP02774 474 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 S100A6P06703 90 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 RAB40ALP0C0E4 278 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DDX5P17844 614 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 NCF2P19878 526 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 DUSP1P28562 367 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 EPHB2P29323 1055 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 LIPAP38571 399 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PRCPP42785 496 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CDKN1BP46527 198 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 SLC11A1P49279 550 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 POLR2LP62875 67 aaKnown RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TGM3Q08188 693 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CCDC173Q0VFZ6 552 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 GAB1Q13480 694 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CUL1Q13616 776 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PDK3Q15120 406 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PTPAQ15257 358 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 HSPB2Q16082 182 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 TCTN1Q2MV58 587 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 CD300EQ496F6 205 aaPredicted RBP4.8□□□□□ -1.64
GABPB1-204ENST00000396464 LY6G5CQ5SRR4 150 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 FBXO42Q6P3S6 717 aa4.8□□□□□ -1.64
GABPB1-204ENST00000396464 PRSS55Q6UWB4 352 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms