RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 ZNF140P52738 457 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 RFTN2Q52LD8 501 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 RSPO2Q6UXX9 243 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GRASPQ7Z6J2 395 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MARVELD2Q8N4S9 558 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 OR5AK3PQ8NH89 298 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 FAM81AQ8TBF8 368 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ZUFSPQ96AP4 578 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 EXOSC8Q96B26 276 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ZDHHC4Q9NPG8 344 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 IL26Q9NPH9 171 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ETAA1Q9NY74 926 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ANGPT4Q9Y264 503 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 RUVBL1Q9Y265 456 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 COQ6Q9Y2Z9 468 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PCDHGA11Q9Y5H2 935 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GOLGB1Q14789 3259 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 OR10H3O60404 316 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ERN1O75460 977 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PRNPP04156 253 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ACRV1P26436 265 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 FMO3P31513 532 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 APLP1P51693 650 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 IST1P53990 364 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 LRP8Q14114 963 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GPR153Q6NV75 609 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM207Q6UWW9 146 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 R3HCC1LQ7Z5L2 792 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CCDC103Q8IW40 242 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 C11orf65Q8NCR3 313 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 SLC22A12Q96S37 553 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 NODALQ96S42 347 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CLSTN3Q9BQT9 956 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MCMBPQ9BTE3 642 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ATXN10Q9UBB4 475 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ABHD14A-ACY1A0A1B0GW23 586 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MROH6A6NGR9 719 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 FBP2O00757 339 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 UBFD1O14562 309 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 TOR1BO14657 336 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 WNT9AO14904 365 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 LEFTY1O75610 366 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CREG1O75629 220 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CYP7B1O75881 506 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 NADKO95544 446 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MAGEA12P43365 314 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ASMTP46597 345 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ANXA11P50995 505 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CLCN4P51793 760 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CDH12P55289 794 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GALNT1Q10472 559 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GTDC1Q4AE62 458 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 EIF3MQ7L2H7 374 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CMTR2Q8IYT2 770 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MINDY1Q8N5J2 469 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GIPC3Q8TF64 312 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 XAGE5Q8WWM1 108 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MAGEB10Q96LZ2 347 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 REXO4Q9GZR2 422 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CCDC177Q9NQR7 707 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 C8orf4Q9NR00 106 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 SDR39U1Q9NRG7 319 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 KLHL20Q9Y2M5 609 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 BACE2Q9Y5Z0 518 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ISM1B1AKI9 464 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TNFRSF11BO00300 401 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PCDH7O60245 1069 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 EFCAB14O75071 495 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 KRT75O95678 551 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PDYNP01213 254 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 C1QAP02745 245 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 EIF2S1P05198 315 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ACADMP11310 421 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 BCKDHAP12694 445 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 HOXC13P31276 330 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 CTSOP43234 321 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SSR2P43308 183 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TMED10P49755 219 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 DGKEP52429 567 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ARF5P84085 180 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MEF2AQ02078 507 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SRSF11Q05519 484 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TRAF3Q13114 568 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SLBPQ14493 270 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 PSRC1Q6PGN9 363 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 SUSD1Q6UWL2 747 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 RETREG3Q86VR2 466 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 THOC6Q86W42 341 aaKnown RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TRIM69Q86WT6 500 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM25Q86YD3 366 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 OR8H2Q8N162 312 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 TTC29Q8NA56 475 aaPredicted RBP8.25□□□□□ -1.09
PTPRK-206ENST00000368215 GPR150Q8NGU9 434 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 ISL2Q96A47 359 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 MYEOVQ96EZ4 313 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 KLHL25Q9H0H3 589 aa8.25□□□□□ -1.09
PTPRK-206ENST00000368215 AASDHPPTQ9NRN7 309 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms