RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 HNRNPA2B1P22626 353 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 PDHA2P29803 388 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 PBLDP30039 288 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 INHBCP55103 352 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 PKNOX1P55347 436 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 KIAA1024LP59773 190 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 DMPKQ09013 629 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 USP39Q53GS9 565 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 DOK6Q6PKX4 331 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 CRTC3Q6UUV7 619 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 WDR5BQ86VZ2 330 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ENDOVQ8N8Q3 282 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 FAM122AQ96E09 287 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 MAELQ96JY0 434 aaKnown RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 CATSPER2Q96P56 530 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 TMEM79Q9BSE2 394 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 TNFRSF12AQ9NP84 129 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 MID1IP1Q9NPA3 183 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SEMA4BQ9NPR2 832 aaPredicted RBP11.76□□□□□ -0.53
USF1-203ENST00000368021 TXLNGQ9NUQ3 528 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 STOML1Q9UBI4 398 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 FAM8A1Q9UBU6 413 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 SH3GLB1Q9Y371 365 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ASB1Q9Y576 335 aa11.76□□□□□ -0.53
USF1-203ENST00000368021 ZFC3H1O60293 1989 aaKnown RBP11.75□□□□□ -0.53
USF1-203ENST00000368021 CCDC163A0A0D9SF12 145 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 TMEM233B4DJY2 109 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 K7EPI3 171 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 PPP6CO00743 305 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 TOR1BO14657 336 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 FPGTO14772 594 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 AZIN1O14977 448 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 KCNJ13O60928 360 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 STK16O75716 305 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 UBOX5O94941 541 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 TSPAN8P19075 237 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
USF1-203ENST00000368021 NUDT1P36639 197 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 PIK3CGP48736 1102 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 CCR5P51681 352 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 GTF2H2Q13888 395 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 UGT3A2Q3SY77 523 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 SLC9B1Q4ZJI4 515 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 FBXO48Q5FWF7 155 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 VWA5B1Q5TIE3 1220 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 KANK2Q63ZY3 851 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 GTF2H2CQ6P1K8 395 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 ALYREFQ86V81 257 aaKnown RBP11.75□□□□□ -0.53
USF1-203ENST00000368021 DEFB119Q8N690 84 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 GAB3Q8WWW8 586 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 KLHL29Q96CT2 875 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 NUF2Q9BZD4 464 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 NMUR2Q9GZQ4 415 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 MEAF6Q9HAF1 191 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 FZD3Q9NPG1 666 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 CYP8B1Q9UNU6 501 aa11.75□□□□□ -0.53
USF1-203ENST00000368021 PCYT1BQ9Y5K3 369 aaPredicted RBP11.75□□□□□ -0.53
USF1-203ENST00000368021 ARHGEF33A8MVX0 844 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 FCHO1O14526 889 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 MAP3K13O43283 966 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 OTCP00480 354 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 CEACAM5P06731 702 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 BCKDHBP21953 392 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 ACADLP28330 430 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 SLC6A12P48065 614 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 HSPA7P48741 367 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 ABRQ12979 859 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 BNIP1Q12981 228 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 CDC16Q13042 620 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 NFE2L1Q14494 772 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 METRNLQ641Q3 311 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 TMEM154Q6P9G4 183 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 LRRC70Q7Z2Q7 622 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 EFL1Q7Z2Z2 1120 aaKnown RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 GOLGA7Q7Z5G4 137 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 ATL1Q8WXF7 558 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 ESAMQ96AP7 390 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 FBXL8Q96CD0 374 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 CCDC138Q96M89 665 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 TIMM29Q9BSF4 260 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 NUSAP1Q9BXS6 441 aaKnown RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 OR52A5Q9H2C5 316 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 SLC32A1Q9H598 525 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 SAR1AQ9NR31 198 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 WSB2Q9NYS7 404 aaPredicted RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 ZNF225Q9UK10 706 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 DNAJC15Q9Y5T4 150 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 HS3ST3A1Q9Y663 406 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 POM121BA6NF01 834 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 HGSO14964 777 aaPredicted RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 KATNA1O75449 491 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 C1orf105O95561 183 aa11.74□□□□□ -0.53
USF1-203ENST00000368021 EIF2S1P05198 315 aaKnown RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 JUNP05412 331 aaKnown RBP11.74□□□□□ -0.53
USF1-203ENST00000368021 UROSP10746 265 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms