RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 RPN2P04844 631 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 CD1EP15812 388 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 HNRNPA2B1P22626 353 aaKnown RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 MRPL19P49406 292 aaKnown RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 KIAA1024LP59773 190 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 ZP2Q05996 745 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 GAS6Q14393 721 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 NR6A1Q15406 480 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 AGKQ53H12 422 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 C6orf136Q5SQH8 315 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 GK5Q6ZS86 529 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 TRIM46Q7Z4K8 759 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 GALNT13Q8IUC8 556 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 DCUN1D3Q8IWE4 304 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 FNDC5Q8NAU1 212 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 FAM13CQ8NE31 585 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 ZNF480Q8WV37 535 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 TFGQ92734 400 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 HBEGFQ99075 208 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 FOXQ1Q9C009 403 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 LMAN1LQ9HAT1 526 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 CIDEBQ9UHD4 219 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 ZNF490Q9ULM2 529 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 SNX6Q9UNH7 406 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 MANBAO00462 879 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 LSM1O15116 133 aaKnown RBP17.62■□□□□ 0.41
VIM-201ENST00000224237 SEMA4FO95754 770 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 FUCA1P04066 466 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 ACP5P13686 325 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 ITGAXP20702 1163 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 GPX3P22352 226 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 NUDT2P50583 147 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 GRIK2Q13002 908 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 STX5Q13190 355 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 RPS6KA2Q15349 733 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 CPSF6Q16630 551 aaKnown RBP eCLIP17.62■□□□□ 0.41
VIM-201ENST00000224237 LIPJQ5W064 366 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 ADHFE1Q8IWW8 467 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 SYTL1Q8IYJ3 562 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 SFRP1Q8N474 314 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 RAD51AP1Q96B01 352 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 PPP3R2Q96LZ3 170 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 EFCAB1Q9HAE3 211 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 AIG1Q9NVV5 245 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 NDE1Q9NXR1 346 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 EBF1Q9UH73 591 aa17.62■□□□□ 0.41
VIM-201ENST00000224237 VCANP13611 3396 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 KCNE1BA0A087WTH5 132 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 AIM2O14862 343 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SLC35G4P0C7Q5 338 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 HALP42357 657 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 TBPL1P62380 186 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 PCDH1Q08174 1060 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 CHIT1Q13231 466 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 UBXN2BQ14CS0 331 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 PYCR3Q53H96 274 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 CAPN13Q6MZZ7 669 aaPredicted RBP17.61■□□□□ 0.41
VIM-201ENST00000224237 PAOXQ6QHF9 649 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 KYQ8NBH2 561 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 PPFIBP2Q8ND30 876 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 OR5K2Q8NHB8 316 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 RCN3Q96D15 328 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
VIM-201ENST00000224237 THTPAQ9BU02 230 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SLC25A23Q9BV35 468 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 BRINP2Q9C0B6 783 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 ELOVL6Q9H5J4 265 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 GPRC5BQ9NZH0 403 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SUFUQ9UMX1 484 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 PSMD13Q9UNM6 376 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 GPR45Q9Y5Y3 372 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 KANSL1LA0AUZ9 987 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 POM121BA6NF01 834 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 LATO43561 262 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 WFS1O76024 890 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SNRPB2P08579 225 aaKnown RBP17.61■□□□□ 0.41
VIM-201ENST00000224237 JUPP14923 745 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 KELP23276 732 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 RAP1GDS1P52306 607 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 DIO3P55073 304 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 IRF8Q02556 426 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 EMX2Q04743 252 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 IMPG1Q17R60 797 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SMU1Q2TAY7 513 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 C16orf89Q6UX73 402 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 OR9I1Q8NGQ6 314 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 SELENOMQ8WWX9 145 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 OR4K3Q96R72 315 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 FARSBQ9NSD9 589 aaKnown RBP17.61■□□□□ 0.41
VIM-201ENST00000224237 MOSPD1Q9UJG1 213 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 FBXL21Q9UKT6 434 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 CA5BQ9Y2D0 317 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 CCL27Q9Y4X3 112 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 KCNE2Q9Y6J6 123 aa17.61■□□□□ 0.41
VIM-201ENST00000224237 A8MUI8 341 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 E7EQ34 232 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 CLGNO14967 610 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 GNAZP19086 355 aa17.6■□□□□ 0.41
VIM-201ENST00000224237 AKT2P31751 481 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms