RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 MKRN1Q9UHC7 482 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 RTCBQ9Y3I0 505 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 EDC4Q6P2E9 1401 aaKnown RBP15.68■□□□□ 0.1
PTP4A1-207ENST00000639568 CTCFP49711 727 aaPredicted RBP15.67■□□□□ 0.1
PTP4A1-207ENST00000639568 ZC3H4Q9UPT8 1303 aaKnown RBP15.67■□□□□ 0.1
PTP4A1-207ENST00000639568 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
PTP4A1-207ENST00000639568 CREBZFQ9NS37 354 aa15.66■□□□□ 0.1
PTP4A1-207ENST00000639568 GLTPD2A6NH11 291 aa15.65■□□□□ 0.1
PTP4A1-207ENST00000639568 RFC4P35249 363 aa15.65■□□□□ 0.1
PTP4A1-207ENST00000639568 MLLT1Q03111 559 aaPredicted RBP15.65■□□□□ 0.1
PTP4A1-207ENST00000639568 SMG6Q86US8 1419 aaKnown RBP15.65■□□□□ 0.1
PTP4A1-207ENST00000639568 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
PTP4A1-207ENST00000639568 CYP27B1O15528 508 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 ITPK1Q13572 414 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 ABHD8Q96I13 439 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 N4BP2Q86UW6 1770 aaPredicted RBP15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 CD163L1Q9NR16 1453 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
PTP4A1-207ENST00000639568 TNRC6CQ9HCJ0 1690 aaKnown RBP15.63■□□□□ 0.09
PTP4A1-207ENST00000639568 MON2Q7Z3U7 1717 aa15.63■□□□□ 0.09
PTP4A1-207ENST00000639568 FBLN1P23142 703 aa15.63■□□□□ 0.09
PTP4A1-207ENST00000639568 UBR3Q6ZT12 1888 aa15.63■□□□□ 0.09
PTP4A1-207ENST00000639568 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
PTP4A1-207ENST00000639568 GYS1P13807 737 aa15.62■□□□□ 0.09
PTP4A1-207ENST00000639568 LMNB1P20700 586 aa15.62■□□□□ 0.09
PTP4A1-207ENST00000639568 ARHGEF1Q92888 912 aaKnown RBP15.62■□□□□ 0.09
PTP4A1-207ENST00000639568 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
PTP4A1-207ENST00000639568 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
PTP4A1-207ENST00000639568 KIF13BQ9NQT8 1826 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 CHRNA5P30532 468 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 LBX1P52954 281 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 RASSF7Q02833 373 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 A0A1W2PP64 1363 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 RTL1A6NKG5 1358 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
PTP4A1-207ENST00000639568 RRS1Q15050 365 aaKnown RBP15.59■□□□□ 0.09
PTP4A1-207ENST00000639568 SPG7Q9UQ90 795 aa15.59■□□□□ 0.09
PTP4A1-207ENST00000639568 CCDC85CA6NKD9 419 aa15.58■□□□□ 0.08
PTP4A1-207ENST00000639568 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
PTP4A1-207ENST00000639568 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
PTP4A1-207ENST00000639568 CNTNAP1P78357 1384 aa15.57■□□□□ 0.08
PTP4A1-207ENST00000639568 RC3H1Q5TC82 1133 aaKnown RBP15.56■□□□□ 0.08
PTP4A1-207ENST00000639568 L3MBTL2Q969R5 705 aa15.56■□□□□ 0.08
PTP4A1-207ENST00000639568 C4AP0C0L4 1744 aa15.55■□□□□ 0.08
PTP4A1-207ENST00000639568 RPS6KA4O75676 772 aa15.55■□□□□ 0.08
PTP4A1-207ENST00000639568 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
PTP4A1-207ENST00000639568 ATG3Q9NT62 314 aa15.55■□□□□ 0.08
PTP4A1-207ENST00000639568 VEGFBP49765 207 aa15.54■□□□□ 0.08
PTP4A1-207ENST00000639568 HSP90AB2PQ58FF8 381 aa15.54■□□□□ 0.08
PTP4A1-207ENST00000639568 WBP1LQ9NX94 342 aa15.54■□□□□ 0.08
PTP4A1-207ENST00000639568 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
PTP4A1-207ENST00000639568 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
PTP4A1-207ENST00000639568 POTECB2RU33 542 aa15.53■□□□□ 0.08
PTP4A1-207ENST00000639568 RGS19P49795 217 aa15.53■□□□□ 0.08
PTP4A1-207ENST00000639568 CNTNAP4Q9C0A0 1308 aa15.52■□□□□ 0.08
PTP4A1-207ENST00000639568 RGPD2P0DJD1 1756 aa15.52■□□□□ 0.07
PTP4A1-207ENST00000639568 INSRP06213 1382 aa15.51■□□□□ 0.07
PTP4A1-207ENST00000639568 DDR1Q08345 913 aa15.51■□□□□ 0.07
PTP4A1-207ENST00000639568 FKBP8Q14318 412 aa15.51■□□□□ 0.07
PTP4A1-207ENST00000639568 TMEM88BA6NKF7 163 aa15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 HSPA8P11142 646 aaKnown RBP15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 MAP2K1Q02750 393 aaPredicted RBP15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 IFNL2Q8IZJ0 200 aa15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 TTLL6Q8N841 843 aa15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 CFAP44Q96MT7 982 aa15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 PUS7Q96PZ0 661 aaKnown RBP15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 SRP68Q9UHB9 627 aaKnown RBP15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 BRCA1P38398 1863 aaKnown RBP15.5■□□□□ 0.07
PTP4A1-207ENST00000639568 ERFEQ4G0M1 354 aa15.49■□□□□ 0.07
PTP4A1-207ENST00000639568 MAP2P11137 1827 aaKnown RBP15.48■□□□□ 0.07
PTP4A1-207ENST00000639568 SLC4A9Q96Q91 983 aa15.48■□□□□ 0.07
PTP4A1-207ENST00000639568 GGNBP2Q9H3C7 697 aa15.48■□□□□ 0.07
PTP4A1-207ENST00000639568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.48■□□□□ 0.071e-9■■□□□ 12.2
PTP4A1-207ENST00000639568 FLT4P35916 1363 aa15.48■□□□□ 0.07
PTP4A1-207ENST00000639568 ITGB4P16144 1822 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 USP42Q9H9J4 1324 aaKnown RBP15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 POLRMTO00411 1230 aaKnown RBP15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 POTEIP0CG38 1075 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 POTEJP0CG39 1038 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 PHKG2P15735 406 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 BEGAINQ9BUH8 593 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 CARD11Q9BXL7 1154 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 KDRP35968 1356 aa15.47■□□□□ 0.07
PTP4A1-207ENST00000639568 ZPR1O75312 459 aa15.46■□□□□ 0.07
PTP4A1-207ENST00000639568 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
PTP4A1-207ENST00000639568 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
PTP4A1-207ENST00000639568 IQCA1LA6NCM1 817 aa15.45■□□□□ 0.06
PTP4A1-207ENST00000639568 NFKBIEO00221 500 aa15.45■□□□□ 0.06
PTP4A1-207ENST00000639568 CRKLP46109 303 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-207ENST00000639568 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
PTP4A1-207ENST00000639568 SBF1O95248 1867 aa15.44■□□□□ 0.06
PTP4A1-207ENST00000639568 H0YIN7 160 aa15.44■□□□□ 0.06
PTP4A1-207ENST00000639568 FYB1O15117 783 aa15.44■□□□□ 0.06
PTP4A1-207ENST00000639568 TM4SF1P30408 202 aa15.44■□□□□ 0.06
PTP4A1-207ENST00000639568 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
PTP4A1-207ENST00000639568 ERVV-2B6SEH9 535 aa15.43■□□□□ 0.06
PTP4A1-207ENST00000639568 PPM1GO15355 546 aaPredicted RBP15.43■□□□□ 0.06
PTP4A1-207ENST00000639568 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms