RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ATP6V1AP38606 617 aa17.21■□□□□ 0.34
CTSD-208ENST00000636843 ATG3Q9NT62 314 aa17.21■□□□□ 0.34
CTSD-208ENST00000636843 ITPK1Q13572 414 aa17.2■□□□□ 0.34
CTSD-208ENST00000636843 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
CTSD-208ENST00000636843 GOLGB1Q14789 3259 aaKnown RBP17.19■□□□□ 0.34
CTSD-208ENST00000636843 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
CTSD-208ENST00000636843 GNPATO15228 680 aa17.19■□□□□ 0.34
CTSD-208ENST00000636843 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
CTSD-208ENST00000636843 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
CTSD-208ENST00000636843 DCAF5Q96JK2 942 aa17.19■□□□□ 0.34
CTSD-208ENST00000636843 AMOTQ4VCS5 1084 aa17.17■□□□□ 0.34
CTSD-208ENST00000636843 MORC1Q86VD1 984 aa17.17■□□□□ 0.34
CTSD-208ENST00000636843 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
CTSD-208ENST00000636843 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
CTSD-208ENST00000636843 KDRP35968 1356 aa17.15■□□□□ 0.34
CTSD-208ENST00000636843 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
CTSD-208ENST00000636843 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
CTSD-208ENST00000636843 RTCBQ9Y3I0 505 aaKnown RBP17.15■□□□□ 0.34
CTSD-208ENST00000636843 KNSTRNQ9Y448 316 aa17.15■□□□□ 0.34
CTSD-208ENST00000636843 CABP4P57796 275 aa17.14■□□□□ 0.33
CTSD-208ENST00000636843 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
CTSD-208ENST00000636843 MIER1Q8N108 512 aa17.14■□□□□ 0.33
CTSD-208ENST00000636843 ADRA2BP18089 450 aa17.13■□□□□ 0.33
CTSD-208ENST00000636843 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
CTSD-208ENST00000636843 MTHFSP49914 203 aa17.12■□□□□ 0.33
CTSD-208ENST00000636843 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
CTSD-208ENST00000636843 NLGN1Q8N2Q7 840 aa17.12■□□□□ 0.33
CTSD-208ENST00000636843 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
CTSD-208ENST00000636843 MMP10P09238 476 aa17.11■□□□□ 0.33
CTSD-208ENST00000636843 AEBP1Q8IUX7 1158 aa17.11■□□□□ 0.33
CTSD-208ENST00000636843 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
CTSD-208ENST00000636843 ATP10DQ9P241 1426 aa17.11■□□□□ 0.33
CTSD-208ENST00000636843 RPS6KA4O75676 772 aa17.11■□□□□ 0.33
CTSD-208ENST00000636843 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
CTSD-208ENST00000636843 SULT6B1Q6IMI4 303 aa17.1■□□□□ 0.33
CTSD-208ENST00000636843 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
CTSD-208ENST00000636843 IL13P35225 146 aa17.09■□□□□ 0.33
CTSD-208ENST00000636843 RFC4P35249 363 aa17.08■□□□□ 0.32
CTSD-208ENST00000636843 TGFB2P61812 414 aa17.08■□□□□ 0.32
CTSD-208ENST00000636843 GPBP1L1Q9HC44 474 aaPredicted RBP17.08■□□□□ 0.32
CTSD-208ENST00000636843 ADCY9O60503 1353 aa17.08■□□□□ 0.32
CTSD-208ENST00000636843 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
CTSD-208ENST00000636843 CENPBP07199 599 aaPredicted RBP17.07■□□□□ 0.32
CTSD-208ENST00000636843 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
CTSD-208ENST00000636843 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
CTSD-208ENST00000636843 GYS1P13807 737 aa17.06■□□□□ 0.32
CTSD-208ENST00000636843 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
CTSD-208ENST00000636843 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
CTSD-208ENST00000636843 PARP3Q9Y6F1 533 aa17.06■□□□□ 0.32
CTSD-208ENST00000636843 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
CTSD-208ENST00000636843 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
CTSD-208ENST00000636843 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
CTSD-208ENST00000636843 CICQ96RK0 1608 aaPredicted RBP17.04■□□□□ 0.32
CTSD-208ENST00000636843 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
CTSD-208ENST00000636843 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
CTSD-208ENST00000636843 COL5A3P25940 1745 aaPredicted RBP17.03■□□□□ 0.32
CTSD-208ENST00000636843 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
CTSD-208ENST00000636843 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
CTSD-208ENST00000636843 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
CTSD-208ENST00000636843 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
CTSD-208ENST00000636843 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
CTSD-208ENST00000636843 MYH14Q7Z406 1995 aaKnown RBP17.01■□□□□ 0.31
CTSD-208ENST00000636843 PER1O15534 1290 aaPredicted RBP17■□□□□ 0.31
CTSD-208ENST00000636843 DPEP1P16444 411 aa17■□□□□ 0.31
CTSD-208ENST00000636843 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
CTSD-208ENST00000636843 USP42Q9H9J4 1324 aaKnown RBP16.99■□□□□ 0.31
CTSD-208ENST00000636843 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
CTSD-208ENST00000636843 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
CTSD-208ENST00000636843 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
CTSD-208ENST00000636843 SRP68Q9UHB9 627 aaKnown RBP16.99■□□□□ 0.31
CTSD-208ENST00000636843 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
CTSD-208ENST00000636843 FCHSD2O94868 740 aa16.98■□□□□ 0.31
CTSD-208ENST00000636843 HMOX1P09601 288 aa16.98■□□□□ 0.31
CTSD-208ENST00000636843 FKBP8Q14318 412 aa16.98■□□□□ 0.31
CTSD-208ENST00000636843 SCN11AQ9UI33 1791 aa16.98■□□□□ 0.31
CTSD-208ENST00000636843 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
CTSD-208ENST00000636843 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
CTSD-208ENST00000636843 KIAA1551Q9HCM1 1747 aa16.97■□□□□ 0.31
CTSD-208ENST00000636843 ZPR1O75312 459 aa16.96■□□□□ 0.3
CTSD-208ENST00000636843 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.3
CTSD-208ENST00000636843 HSPA6P17066 643 aa16.96■□□□□ 0.3
CTSD-208ENST00000636843 KCNA3P22001 575 aa16.96■□□□□ 0.3
CTSD-208ENST00000636843 MTHFSDQ2M296 383 aaKnown RBP16.96■□□□□ 0.3
CTSD-208ENST00000636843 CC2D1BQ5T0F9 858 aaKnown RBP16.96■□□□□ 0.3
CTSD-208ENST00000636843 PIM2Q9P1W9 311 aa16.96■□□□□ 0.3
CTSD-208ENST00000636843 MRC1P22897 1456 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 N4BP2Q86UW6 1770 aaPredicted RBP16.95■□□□□ 0.3
CTSD-208ENST00000636843 SOS1Q07889 1333 aaPredicted RBP16.95■□□□□ 0.3
CTSD-208ENST00000636843 TJP1Q07157 1748 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 KIF3CO14782 793 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 TM4SF1P30408 202 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 DDR1Q08345 913 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
CTSD-208ENST00000636843 NPC1L1Q9UHC9 1359 aa16.94■□□□□ 0.3
CTSD-208ENST00000636843 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
CTSD-208ENST00000636843 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
CTSD-208ENST00000636843 DDX10Q13206 875 aaKnown RBP16.93■□□□□ 0.3
CTSD-208ENST00000636843 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
CTSD-208ENST00000636843 CEP350Q5VT06 3117 aa16.93■□□□□ 0.3
CTSD-208ENST00000636843 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms