RNA–Protein interactions for RNA: ENST00000636337.1

SPTAN1-231, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-231	ENST00000636337	TMF1	P82094	1093 aa		14.08	□□□□□ -0.16
SPTAN1-231	ENST00000636337	NLGN1	Q8N2Q7	840 aa		14.08	□□□□□ -0.16
SPTAN1-231	ENST00000636337	USHBP1	Q8N6Y0	703 aa		14.08	□□□□□ -0.16
SPTAN1-231	ENST00000636337	RAPGEF4	Q8WZA2	1011 aa		14.08	□□□□□ -0.16
SPTAN1-231	ENST00000636337	AIDA	Q96BJ3	306 aa		14.08	□□□□□ -0.16
SPTAN1-231	ENST00000636337	LOC102724428	A0A0B4J2F2	783 aa		14.07	□□□□□ -0.16
SPTAN1-231	ENST00000636337	SIK1	P57059	783 aa		14.07	□□□□□ -0.16
SPTAN1-231	ENST00000636337	CREBZF	Q9NS37	354 aa		14.07	□□□□□ -0.16
SPTAN1-231	ENST00000636337	ZC3H4	Q9UPT8	1303 aa	Known RBP	14.07	□□□□□ -0.16
SPTAN1-231	ENST00000636337	GLTPD2	A6NH11	291 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	AMPH	P49418	695 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	ITPK1	Q13572	414 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	NBPF6	Q5VWK0	638 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	PIGB	Q92521	554 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	NBPF4	Q96M43	638 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	PARP3	Q9Y6F1	533 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	MAP3K19	Q56UN5	1328 aa		14.06	□□□□□ -0.16
SPTAN1-231	ENST00000636337	TAT	P17735	454 aa	Predicted RBP	14.05	□□□□□ -0.16
SPTAN1-231	ENST00000636337	LBX1	P52954	281 aa		14.05	□□□□□ -0.16
SPTAN1-231	ENST00000636337	RASSF7	Q02833	373 aa		14.05	□□□□□ -0.16
SPTAN1-231	ENST00000636337	EDC4	Q6P2E9	1401 aa	Known RBP	14.05	□□□□□ -0.16
SPTAN1-231	ENST00000636337	TRAPPC3L	Q5T215	181 aa		14.04	□□□□□ -0.16
SPTAN1-231	ENST00000636337	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.04	□□□□□ -0.16
SPTAN1-231	ENST00000636337	CNTNAP1	P78357	1384 aa		14.04	□□□□□ -0.16
SPTAN1-231	ENST00000636337	CYP27B1	O15528	508 aa		14.03	□□□□□ -0.16
SPTAN1-231	ENST00000636337	FBLN1	P23142	703 aa		14.03	□□□□□ -0.16
SPTAN1-231	ENST00000636337	ATP6V1A	P38606	617 aa		14.03	□□□□□ -0.16
SPTAN1-231	ENST00000636337	TMC1	Q8TDI8	760 aa		14.03	□□□□□ -0.16
SPTAN1-231	ENST00000636337	KDM6A	O15550	1401 aa	Predicted RBP	14.03	□□□□□ -0.16
SPTAN1-231	ENST00000636337	TIAM2	Q8IVF5	1701 aa		14.02	□□□□□ -0.16
SPTAN1-231	ENST00000636337	CCDC85C	A6NKD9	419 aa		14.02	□□□□□ -0.17
SPTAN1-231	ENST00000636337	GYS1	P13807	737 aa		14.02	□□□□□ -0.17
SPTAN1-231	ENST00000636337	RTCB	Q9Y3I0	505 aa	Known RBP	14.02	□□□□□ -0.17
SPTAN1-231	ENST00000636337	CHRNA5	P30532	468 aa		14.01	□□□□□ -0.17
SPTAN1-231	ENST00000636337	RGS19	P49795	217 aa		14.01	□□□□□ -0.17
SPTAN1-231	ENST00000636337	POTEC	B2RU33	542 aa		14	□□□□□ -0.17
SPTAN1-231	ENST00000636337	LMNB1	P20700	586 aa		14	□□□□□ -0.17
SPTAN1-231	ENST00000636337	ARHGEF1	Q92888	912 aa	Known RBP	14	□□□□□ -0.17
SPTAN1-231	ENST00000636337	ASAP1	Q9ULH1	1129 aa		14	□□□□□ -0.17
SPTAN1-231	ENST00000636337	SMG6	Q86US8	1419 aa	Known RBP	13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337		A0A1W2PP64	1363 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	RFC4	P35249	363 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	VEGFB	P49765	207 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	CHADL	Q6NUI6	762 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	SLC12A5	Q9H2X9	1139 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	WBP1L	Q9NX94	342 aa		13.99	□□□□□ -0.17
SPTAN1-231	ENST00000636337	RTL1	A6NKG5	1358 aa		13.98	□□□□□ -0.17
SPTAN1-231	ENST00000636337	HSPA8	P11142	646 aa	Known RBP	13.98	□□□□□ -0.17
SPTAN1-231	ENST00000636337	COG3	Q96JB2	828 aa		13.98	□□□□□ -0.17
SPTAN1-231	ENST00000636337	TMOD3	Q9NYL9	352 aa		13.98	□□□□□ -0.17
SPTAN1-231	ENST00000636337	VIRMA	Q69YN4	1812 aa	Known RBP	13.97	□□□□□ -0.17
SPTAN1-231	ENST00000636337	ADRA2B	P18089	450 aa		13.97	□□□□□ -0.17
SPTAN1-231	ENST00000636337	TERF2IP	Q9NYB0	399 aa		13.97	□□□□□ -0.17
SPTAN1-231	ENST00000636337	CCDC88A	Q3V6T2	1871 aa		13.97	□□□□□ -0.17
SPTAN1-231	ENST00000636337	TNRC18	O15417	2968 aa	Predicted RBP	13.97	□□□□□ -0.17
SPTAN1-231	ENST00000636337	POTEI	P0CG38	1075 aa		13.96	□□□□□ -0.17
SPTAN1-231	ENST00000636337	POTEJ	P0CG39	1038 aa		13.96	□□□□□ -0.17
SPTAN1-231	ENST00000636337	RRS1	Q15050	365 aa	Known RBP	13.96	□□□□□ -0.17
SPTAN1-231	ENST00000636337	ROCK2	O75116	1388 aa	Known RBP	13.96	□□□□□ -0.18
SPTAN1-231	ENST00000636337	DDR1	Q08345	913 aa		13.95	□□□□□ -0.18
SPTAN1-231	ENST00000636337	NKX1-1	Q15270	411 aa	Predicted RBP	13.95	□□□□□ -0.18
SPTAN1-231	ENST00000636337	DPY19L2	Q6NUT2	758 aa		13.95	□□□□□ -0.18
SPTAN1-231	ENST00000636337	PDE4DIP	Q5VU43	2346 aa		13.94	□□□□□ -0.18
SPTAN1-231	ENST00000636337	ATG3	Q9NT62	314 aa		13.94	□□□□□ -0.18
SPTAN1-231	ENST00000636337	KDR	P35968	1356 aa		13.94	□□□□□ -0.18
SPTAN1-231	ENST00000636337	PASK	Q96RG2	1323 aa		13.93	□□□□□ -0.18
SPTAN1-231	ENST00000636337	COL5A3	P25940	1745 aa	Predicted RBP	13.93	□□□□□ -0.18
SPTAN1-231	ENST00000636337	RPS6KA4	O75676	772 aa		13.93	□□□□□ -0.18
SPTAN1-231	ENST00000636337	CFAP44	Q96MT7	982 aa		13.93	□□□□□ -0.18
SPTAN1-231	ENST00000636337	CNTNAP4	Q9C0A0	1308 aa		13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	FKBP8	Q14318	412 aa		13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	RC3H1	Q5TC82	1133 aa	Known RBP	13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	SLC4A9	Q96Q91	983 aa		13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	RBM42	Q9BTD8	480 aa	Known RBP	13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	SRP68	Q9UHB9	627 aa	Known RBP	13.92	□□□□□ -0.18
SPTAN1-231	ENST00000636337	TMEM88B	A6NKF7	163 aa		13.91	□□□□□ -0.18
SPTAN1-231	ENST00000636337	NFKBIE	O00221	500 aa		13.91	□□□□□ -0.18
SPTAN1-231	ENST00000636337	HSP90AB2P	Q58FF8	381 aa		13.91	□□□□□ -0.18
SPTAN1-231	ENST00000636337	SPG7	Q9UQ90	795 aa		13.91	□□□□□ -0.18
SPTAN1-231	ENST00000636337	MAP2K1	Q02750	393 aa	Predicted RBP	13.9	□□□□□ -0.18
SPTAN1-231	ENST00000636337	INSR	P06213	1382 aa		13.9	□□□□□ -0.18
SPTAN1-231	ENST00000636337	ZNF831	Q5JPB2	1677 aa		13.9	□□□□□ -0.18
SPTAN1-231	ENST00000636337	MYH14	Q7Z406	1995 aa	Known RBP	13.9	□□□□□ -0.18
SPTAN1-231	ENST00000636337	POLRMT	O00411	1230 aa	Known RBP	13.89	□□□□□ -0.19
SPTAN1-231	ENST00000636337	USP42	Q9H9J4	1324 aa	Known RBP	13.89	□□□□□ -0.19
SPTAN1-231	ENST00000636337	DLEC1	Q9Y238	1755 aa		13.88	□□□□□ -0.19
SPTAN1-231	ENST00000636337	ERFE	Q4G0M1	354 aa		13.88	□□□□□ -0.19
SPTAN1-231	ENST00000636337	TTLL6	Q8N841	843 aa		13.88	□□□□□ -0.19
SPTAN1-231	ENST00000636337	L3MBTL2	Q969R5	705 aa		13.88	□□□□□ -0.19
SPTAN1-231	ENST00000636337	LDHD	Q86WU2	507 aa		13.87	□□□□□ -0.19
SPTAN1-231	ENST00000636337	DICER1	Q9UPY3	1922 aa	Known RBP	13.87	□□□□□ -0.19
SPTAN1-231	ENST00000636337	WDR33	Q9C0J8	1336 aa	Known RBP	13.87	□□□□□ -0.19
SPTAN1-231	ENST00000636337	FLT4	P35916	1363 aa		13.86	□□□□□ -0.19
SPTAN1-231	ENST00000636337	RASSF10	A6NK89	507 aa		13.86	□□□□□ -0.19
SPTAN1-231	ENST00000636337	DDN	O94850	711 aa	Predicted RBP	13.86	□□□□□ -0.19
SPTAN1-231	ENST00000636337	DEFB115	Q30KQ5	88 aa		13.86	□□□□□ -0.19
SPTAN1-231	ENST00000636337	ITGBL1	O95965	494 aa	Predicted RBP	13.85	□□□□□ -0.19
SPTAN1-231	ENST00000636337	PHKG2	P15735	406 aa		13.85	□□□□□ -0.19
SPTAN1-231	ENST00000636337	TM4SF1	P30408	202 aa		13.85	□□□□□ -0.19
SPTAN1-231	ENST00000636337	IFNL2	Q8IZJ0	200 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms