RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ATG3Q9NT62 314 aa26.07■■□□□ 1.76
SMN2-215ENST00000628696 WWC3Q9ULE0 1092 aa26.06■■□□□ 1.76
SMN2-215ENST00000628696 PLEKHO1Q53GL0 409 aaPredicted RBP26.02■■□□□ 1.76
SMN2-215ENST00000628696 RBM42Q9BTD8 480 aaKnown RBP26.02■■□□□ 1.76
SMN2-215ENST00000628696 IGSF1Q8N6C5 1336 aa26.02■■□□□ 1.76
SMN2-215ENST00000628696 ERVV-2B6SEH9 535 aa26■■□□□ 1.75
SMN2-215ENST00000628696 HSP90AB1P08238 724 aaKnown RBP26■■□□□ 1.75
SMN2-215ENST00000628696 MORC1Q86VD1 984 aa26■■□□□ 1.75
SMN2-215ENST00000628696 ZNF530Q6P9A1 599 aaPredicted RBP25.99■■□□□ 1.75
SMN2-215ENST00000628696 DCAF5Q96JK2 942 aa25.99■■□□□ 1.75
SMN2-215ENST00000628696 ATP10DQ9P241 1426 aa25.98■■□□□ 1.75
SMN2-215ENST00000628696 PLEKHG2Q9H7P9 1386 aa25.97■■□□□ 1.75
SMN2-215ENST00000628696 CABP4P57796 275 aa25.97■■□□□ 1.75
SMN2-215ENST00000628696 TRAPPC3LQ5T215 181 aa25.97■■□□□ 1.75
SMN2-215ENST00000628696 RTCBQ9Y3I0 505 aaKnown RBP25.97■■□□□ 1.75
SMN2-215ENST00000628696 MMP10P09238 476 aa25.96■■□□□ 1.75
SMN2-215ENST00000628696 AMOTQ4VCS5 1084 aa25.96■■□□□ 1.75
SMN2-215ENST00000628696 CCER1Q8TC90 406 aaPredicted RBP25.96■■□□□ 1.75
SMN2-215ENST00000628696 SLC4A9Q96Q91 983 aa25.96■■□□□ 1.75
SMN2-215ENST00000628696 AEBP1Q8IUX7 1158 aa25.95■■□□□ 1.74
SMN2-215ENST00000628696 KDRP35968 1356 aa25.95■■□□□ 1.74
SMN2-215ENST00000628696 MTHFSP49914 203 aa25.94■■□□□ 1.74
SMN2-215ENST00000628696 ZNF526Q8TF50 670 aaPredicted RBP25.94■■□□□ 1.74
SMN2-215ENST00000628696 C1orf141Q5JVX7 400 aa25.93■■□□□ 1.74
SMN2-215ENST00000628696 GPBP1L1Q9HC44 474 aaPredicted RBP25.93■■□□□ 1.74
SMN2-215ENST00000628696 KNSTRNQ9Y448 316 aa25.93■■□□□ 1.74
SMN2-215ENST00000628696 KDM6AO15550 1401 aaPredicted RBP25.92■■□□□ 1.74
SMN2-215ENST00000628696 RC3H1Q5TC82 1133 aaKnown RBP25.91■■□□□ 1.74
SMN2-215ENST00000628696 SULT6B1Q6IMI4 303 aa25.91■■□□□ 1.74
SMN2-215ENST00000628696 NLGN1Q8N2Q7 840 aa25.91■■□□□ 1.74
SMN2-215ENST00000628696 ARHGEF1Q92888 912 aaKnown RBP25.91■■□□□ 1.74
SMN2-215ENST00000628696 PTCD1O75127 700 aaKnown RBP25.9■■□□□ 1.74
SMN2-215ENST00000628696 RFC4P35249 363 aa25.89■■□□□ 1.74
SMN2-215ENST00000628696 ZNF831Q5JPB2 1677 aa25.89■■□□□ 1.73
SMN2-215ENST00000628696 COL5A3P25940 1745 aaPredicted RBP25.88■■□□□ 1.73
SMN2-215ENST00000628696 RPS6KA4O75676 772 aa25.88■■□□□ 1.73
SMN2-215ENST00000628696 ADRA2BP18089 450 aa25.88■■□□□ 1.73
SMN2-215ENST00000628696 NFATC2IPQ8NCF5 419 aa25.88■■□□□ 1.73
SMN2-215ENST00000628696 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
SMN2-215ENST00000628696 MYH14Q7Z406 1995 aaKnown RBP25.87■■□□□ 1.73
SMN2-215ENST00000628696 N4BP2Q86UW6 1770 aaPredicted RBP25.87■■□□□ 1.73
SMN2-215ENST00000628696 ADCY9O60503 1353 aa25.86■■□□□ 1.73
SMN2-215ENST00000628696 CICQ96RK0 1608 aaPredicted RBP25.86■■□□□ 1.73
SMN2-215ENST00000628696 A0A0G2JLW4 131 aa25.85■■□□□ 1.73
SMN2-215ENST00000628696 GYS1P13807 737 aa25.85■■□□□ 1.73
SMN2-215ENST00000628696 IL13P35225 146 aa25.85■■□□□ 1.73
SMN2-215ENST00000628696 KIF13BQ9NQT8 1826 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 TGFB2P61812 414 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 CCDC87Q9NVE4 849 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 BCS1LQ9Y276 419 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 PARP3Q9Y6F1 533 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 PXDNLA1KZ92 1463 aa25.84■■□□□ 1.73
SMN2-215ENST00000628696 CRKLP46109 303 aaKnown RBP25.82■■□□□ 1.72
SMN2-215ENST00000628696 C4AP0C0L4 1744 aa25.8■■□□□ 1.72
SMN2-215ENST00000628696 KIAA1551Q9HCM1 1747 aa25.8■■□□□ 1.72
SMN2-215ENST00000628696 SCN11AQ9UI33 1791 aa25.8■■□□□ 1.72
SMN2-215ENST00000628696 DPEP1P16444 411 aa25.8■■□□□ 1.72
SMN2-215ENST00000628696 C10orf71Q711Q0 1435 aa25.8■■□□□ 1.72
SMN2-215ENST00000628696 AMER1Q5JTC6 1135 aaPredicted RBP25.79■■□□□ 1.72
SMN2-215ENST00000628696 SRP68Q9UHB9 627 aaKnown RBP25.79■■□□□ 1.72
SMN2-215ENST00000628696 AKAP4Q5JQC9 854 aa25.78■■□□□ 1.72
SMN2-215ENST00000628696 ARHGAP27Q6ZUM4 889 aa25.78■■□□□ 1.72
SMN2-215ENST00000628696 FCHSD2O94868 740 aa25.77■■□□□ 1.72
SMN2-215ENST00000628696 HMOX1P09601 288 aa25.77■■□□□ 1.72
SMN2-215ENST00000628696 LGR6Q9HBX8 967 aa25.76■■□□□ 1.71
SMN2-215ENST00000628696 KIF7Q2M1P5 1343 aa25.76■■□□□ 1.71
SMN2-215ENST00000628696 TJP1Q07157 1748 aa25.76■■□□□ 1.71
SMN2-215ENST00000628696 FKBP8Q14318 412 aa25.75■■□□□ 1.71
SMN2-215ENST00000628696 DNAJC10Q8IXB1 793 aa25.74■■□□□ 1.71
SMN2-215ENST00000628696 SLC52A2Q9HAB3 445 aa25.74■■□□□ 1.71
SMN2-215ENST00000628696 USP42Q9H9J4 1324 aaKnown RBP25.73■■□□□ 1.71
SMN2-215ENST00000628696 INTS5Q6P9B9 1019 aaKnown RBP25.73■■□□□ 1.71
SMN2-215ENST00000628696 VIRMAQ69YN4 1812 aaKnown RBP25.72■■□□□ 1.71
SMN2-215ENST00000628696 RNMTO43148 476 aaKnown RBP25.72■■□□□ 1.71
SMN2-215ENST00000628696 HSPA6P17066 643 aa25.72■■□□□ 1.71
SMN2-215ENST00000628696 SLC39A6Q13433 755 aa25.72■■□□□ 1.71
SMN2-215ENST00000628696 CC2D1BQ5T0F9 858 aaKnown RBP25.72■■□□□ 1.71
SMN2-215ENST00000628696 BRCA1P38398 1863 aaKnown RBP25.71■■□□□ 1.71
SMN2-215ENST00000628696 KIF3CO14782 793 aa25.71■■□□□ 1.71
SMN2-215ENST00000628696 DDR1Q08345 913 aa25.71■■□□□ 1.71
SMN2-215ENST00000628696 ZPR1O75312 459 aa25.7■■□□□ 1.7
SMN2-215ENST00000628696 KCNA3P22001 575 aa25.7■■□□□ 1.7
SMN2-215ENST00000628696 PIM2Q9P1W9 311 aa25.7■■□□□ 1.7
SMN2-215ENST00000628696 DIAPH1O60610 1272 aaKnown RBP25.69■■□□□ 1.7
SMN2-215ENST00000628696 CNGB1Q14028 1251 aaPredicted RBP25.69■■□□□ 1.7
SMN2-215ENST00000628696 MTHFSDQ2M296 383 aaKnown RBP25.68■■□□□ 1.7
SMN2-215ENST00000628696 CEP350Q5VT06 3117 aa25.68■■□□□ 1.7
SMN2-215ENST00000628696 USPL1Q5W0Q7 1092 aa25.67■■□□□ 1.7
SMN2-215ENST00000628696 ARFGEF1Q9Y6D6 1849 aa25.66■■□□□ 1.7
SMN2-215ENST00000628696 PER1O15534 1290 aaPredicted RBP25.66■■□□□ 1.7
SMN2-215ENST00000628696 CYP19A1P11511 503 aaPredicted RBP25.66■■□□□ 1.7
SMN2-215ENST00000628696 DALRD3Q5D0E6 543 aaKnown RBP25.66■■□□□ 1.7
SMN2-215ENST00000628696 SOS1Q07889 1333 aaPredicted RBP25.65■■□□□ 1.7
SMN2-215ENST00000628696 TM4SF1P30408 202 aa25.65■■□□□ 1.7
SMN2-215ENST00000628696 CHRNA5P30532 468 aa25.65■■□□□ 1.7
SMN2-215ENST00000628696 POLRMTO00411 1230 aaKnown RBP25.64■■□□□ 1.7
SMN2-215ENST00000628696 C9orf131Q5VYM1 1079 aa25.64■■□□□ 1.7
SMN2-215ENST00000628696 ADAMTS7Q9UKP4 1686 aa25.64■■□□□ 1.69
SMN2-215ENST00000628696 MRC1P22897 1456 aa25.63■■□□□ 1.69
SMN2-215ENST00000628696 NMRK2Q9NPI5 230 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms