RNA–Protein interactions for RNA: ENST00000620021.4

TMCO3-210, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 3,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-210ENST00000620021 CCDC30Q5VVM6 783 aa16.4■□□□□ 0.22
TMCO3-210ENST00000620021 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
TMCO3-210ENST00000620021 RGPD5Q99666 1765 aa16.39■□□□□ 0.22
TMCO3-210ENST00000620021 C16orf71Q8IYS4 520 aaPredicted RBP16.39■□□□□ 0.21
TMCO3-210ENST00000620021 SLAIN2Q9P270 581 aa16.39■□□□□ 0.21
TMCO3-210ENST00000620021 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
TMCO3-210ENST00000620021 USP54Q70EL1 1684 aa16.39■□□□□ 0.21
TMCO3-210ENST00000620021 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
TMCO3-210ENST00000620021 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
TMCO3-210ENST00000620021 SLC39A6Q13433 755 aa16.39■□□□□ 0.21
TMCO3-210ENST00000620021 PTPRCP08575 1304 aa16.38■□□□□ 0.21
TMCO3-210ENST00000620021 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
TMCO3-210ENST00000620021 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
TMCO3-210ENST00000620021 SMARCA5O60264 1052 aaPredicted RBP16.38■□□□□ 0.21
TMCO3-210ENST00000620021 RAPGEF4Q8WZA2 1011 aa16.38■□□□□ 0.21
TMCO3-210ENST00000620021 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
TMCO3-210ENST00000620021 SLIT3O75094 1523 aa16.37■□□□□ 0.21
TMCO3-210ENST00000620021 CEMIPQ8WUJ3 1361 aa16.37■□□□□ 0.21
TMCO3-210ENST00000620021 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
TMCO3-210ENST00000620021 PDIA4P13667 645 aaKnown RBP16.36■□□□□ 0.21
TMCO3-210ENST00000620021 MFAP1P55081 439 aaKnown RBP16.36■□□□□ 0.21
TMCO3-210ENST00000620021 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
TMCO3-210ENST00000620021 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
TMCO3-210ENST00000620021 OTUD7AQ8TE49 926 aaPredicted RBP16.36■□□□□ 0.21
TMCO3-210ENST00000620021 CHMP4BQ9H444 224 aaKnown RBP16.36■□□□□ 0.21
TMCO3-210ENST00000620021 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
TMCO3-210ENST00000620021 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
TMCO3-210ENST00000620021 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
TMCO3-210ENST00000620021 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
TMCO3-210ENST00000620021 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
TMCO3-210ENST00000620021 ANKRD44Q8N8A2 993 aa16.33■□□□□ 0.2
TMCO3-210ENST00000620021 PIP4K2AP48426 406 aaPredicted RBP16.33■□□□□ 0.2
TMCO3-210ENST00000620021 TNS3Q68CZ2 1445 aa16.33■□□□□ 0.2
TMCO3-210ENST00000620021 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
TMCO3-210ENST00000620021 STRN4Q9NRL3 753 aa16.32■□□□□ 0.2
TMCO3-210ENST00000620021 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
TMCO3-210ENST00000620021 KIF1AQ12756 1690 aa16.32■□□□□ 0.2
TMCO3-210ENST00000620021 EXOC6BQ9Y2D4 811 aa16.32■□□□□ 0.2
TMCO3-210ENST00000620021 ALS2Q96Q42 1657 aa16.31■□□□□ 0.2
TMCO3-210ENST00000620021 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
TMCO3-210ENST00000620021 CCT4P50991 539 aaKnown RBP16.31■□□□□ 0.2
TMCO3-210ENST00000620021 PI4KAP1Q8N8J0 262 aa16.31■□□□□ 0.2
TMCO3-210ENST00000620021 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
TMCO3-210ENST00000620021 ATP10DQ9P241 1426 aa16.31■□□□□ 0.2
TMCO3-210ENST00000620021 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
TMCO3-210ENST00000620021 DCCP43146 1447 aa16.3■□□□□ 0.2
TMCO3-210ENST00000620021 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
TMCO3-210ENST00000620021 PNMA6EA0A0J9YXQ4 647 aa16.3■□□□□ 0.2
TMCO3-210ENST00000620021 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
TMCO3-210ENST00000620021 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
TMCO3-210ENST00000620021 CYP27B1O15528 508 aa16.29■□□□□ 0.2
TMCO3-210ENST00000620021 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
TMCO3-210ENST00000620021 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
TMCO3-210ENST00000620021 MEGF6O75095 1541 aa16.29■□□□□ 0.2
TMCO3-210ENST00000620021 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
TMCO3-210ENST00000620021 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
TMCO3-210ENST00000620021 RPAP2Q8IXW5 612 aaPredicted RBP16.29■□□□□ 0.2
TMCO3-210ENST00000620021 GNAI2P04899 355 aa16.28■□□□□ 0.2
TMCO3-210ENST00000620021 PHKG2P15735 406 aa16.28■□□□□ 0.2
TMCO3-210ENST00000620021 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
TMCO3-210ENST00000620021 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
TMCO3-210ENST00000620021 BABAM1Q9NWV8 329 aa16.28■□□□□ 0.2
TMCO3-210ENST00000620021 MYL6BP14649 208 aa16.27■□□□□ 0.2
TMCO3-210ENST00000620021 GLIPR1L2Q4G1C9 344 aa16.27■□□□□ 0.2
TMCO3-210ENST00000620021 SPRYD3Q8NCJ5 442 aa16.27■□□□□ 0.2
TMCO3-210ENST00000620021 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
TMCO3-210ENST00000620021 NBPF7P0C2Y1 421 aaPredicted RBP16.27■□□□□ 0.19
TMCO3-210ENST00000620021 SPG7Q9UQ90 795 aa16.27■□□□□ 0.19
TMCO3-210ENST00000620021 NCOA3Q9Y6Q9 1424 aa16.27■□□□□ 0.19
TMCO3-210ENST00000620021 PHRF1Q9P1Y6 1649 aaKnown RBP16.26■□□□□ 0.19
TMCO3-210ENST00000620021 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
TMCO3-210ENST00000620021 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
TMCO3-210ENST00000620021 TBC1D32Q96NH3 1257 aa16.26■□□□□ 0.19
TMCO3-210ENST00000620021 ZNF790Q6PG37 636 aa16.25■□□□□ 0.19
TMCO3-210ENST00000620021 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
TMCO3-210ENST00000620021 SLC52A2Q9HAB3 445 aa16.25■□□□□ 0.19
TMCO3-210ENST00000620021 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
TMCO3-210ENST00000620021 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
TMCO3-210ENST00000620021 LARP1Q6PKG0 1096 aaKnown RBP16.24■□□□□ 0.19
TMCO3-210ENST00000620021 C22orf23Q9BZE7 217 aa16.24■□□□□ 0.19
TMCO3-210ENST00000620021 SRCIN1Q9C0H9 1055 aa16.24■□□□□ 0.19
TMCO3-210ENST00000620021 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
TMCO3-210ENST00000620021 KDM6AO15550 1401 aaPredicted RBP16.24■□□□□ 0.19
TMCO3-210ENST00000620021 NCAPD2Q15021 1401 aa16.24■□□□□ 0.19
TMCO3-210ENST00000620021 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
TMCO3-210ENST00000620021 DNAAF4Q8WXU2 420 aa16.24■□□□□ 0.19
TMCO3-210ENST00000620021 MAP3K2Q9Y2U5 619 aa16.24■□□□□ 0.19
TMCO3-210ENST00000620021 EVA1CP58658 441 aa16.23■□□□□ 0.19
TMCO3-210ENST00000620021 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-210ENST00000620021 BMP2KLQ5H9B9 411 aa16.23■□□□□ 0.19
TMCO3-210ENST00000620021 USP16Q9Y5T5 823 aa16.23■□□□□ 0.19
TMCO3-210ENST00000620021 GNAI3P08754 354 aa16.23■□□□□ 0.19
TMCO3-210ENST00000620021 TBC1D9Q6ZT07 1266 aa16.23■□□□□ 0.19
TMCO3-210ENST00000620021 BCL11BQ9C0K0 894 aaPredicted RBP16.23■□□□□ 0.19
TMCO3-210ENST00000620021 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
TMCO3-210ENST00000620021 SLKQ9H2G2 1235 aaPredicted RBP16.22■□□□□ 0.19
TMCO3-210ENST00000620021 HMMRO75330 724 aa16.22■□□□□ 0.19
TMCO3-210ENST00000620021 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
TMCO3-210ENST00000620021 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
TMCO3-210ENST00000620021 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms