RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
MATR3-227ENST00000618441 KANK1Q14678 1352 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 TTC31Q49AM3 519 aaPredicted RBP14.56□□□□□ -0.08
MATR3-227ENST00000618441 GRIPAP1Q4V328 841 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 SLC26A8Q96RN1 970 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 GEMIN8Q9NWZ8 242 aaKnown RBP14.56□□□□□ -0.08
MATR3-227ENST00000618441 JRKLQ9Y4A0 524 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 CYP2C19P33261 490 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 TPM4P67936 248 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 ST5P78524 1137 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 PAXBP1Q9Y5B6 917 aa14.56□□□□□ -0.08
MATR3-227ENST00000618441 RBM6P78332 1123 aaKnown RBP14.56□□□□□ -0.08
MATR3-227ENST00000618441 INTS3Q68E01 1043 aaKnown RBP14.56□□□□□ -0.08
MATR3-227ENST00000618441 IPO8O15397 1037 aaKnown RBP14.55□□□□□ -0.08
MATR3-227ENST00000618441 ARID4AP29374 1257 aaPredicted RBP14.55□□□□□ -0.08
MATR3-227ENST00000618441 TMCO3Q6UWJ1 677 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 PIK3R5Q8WYR1 880 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 CLEC17AQ6ZS10 378 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 TXLNBQ8N3L3 684 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 TDO2P48775 406 aa14.55□□□□□ -0.08
MATR3-227ENST00000618441 AP5Z1O43299 807 aa14.54□□□□□ -0.08
MATR3-227ENST00000618441 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
MATR3-227ENST00000618441 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 ANO2Q9NQ90 1003 aa14.54□□□□□ -0.08
MATR3-227ENST00000618441 VPS37CA5D8V6 355 aaPredicted RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 VGFO15240 615 aaPredicted RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 DNAJC21Q5F1R6 531 aaKnown RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 CT47A1Q5JQC4 288 aaPredicted RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 CFAP65Q6ZU64 1925 aaKnown RBP14.54□□□□□ -0.08
MATR3-227ENST00000618441 WDR7Q9Y4E6 1490 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 POLD1P28340 1107 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 MNS1Q8NEH6 495 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 CLIP2Q9UDT6 1046 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 CCDC192P0DO97 292 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 MX1P20591 662 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 SMARCE1Q969G3 411 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 TESK2Q96S53 571 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 SEC31AO94979 1220 aaKnown RBP14.53□□□□□ -0.08
MATR3-227ENST00000618441 CYP2E1P05181 493 aaPredicted RBP14.53□□□□□ -0.08
MATR3-227ENST00000618441 LEKR1Q6ZMV7 388 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 NCAPGQ9BPX3 1015 aa14.53□□□□□ -0.08
MATR3-227ENST00000618441 SAMD9LQ8IVG5 1584 aa14.52□□□□□ -0.08
MATR3-227ENST00000618441 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.08
MATR3-227ENST00000618441 SIRT1Q96EB6 747 aa14.52□□□□□ -0.08
MATR3-227ENST00000618441 POLKQ9UBT6 870 aa14.52□□□□□ -0.08
MATR3-227ENST00000618441 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.52□□□□□ -0.08
MATR3-227ENST00000618441 ARGLU1Q9NWB6 273 aaPredicted RBP14.52□□□□□ -0.08
MATR3-227ENST00000618441 SLU7O95391 586 aaKnown RBP14.52□□□□□ -0.09
MATR3-227ENST00000618441 RRP15Q9Y3B9 282 aaKnown RBP14.52□□□□□ -0.09
MATR3-227ENST00000618441 NUTM2FA1L443 756 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 PSEN1P49768 467 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 ARID5BQ14865 1188 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 AXDND1Q5T1B0 1012 aaPredicted RBP14.51□□□□□ -0.09
MATR3-227ENST00000618441 OTUD7AQ8TE49 926 aaPredicted RBP14.51□□□□□ -0.09
MATR3-227ENST00000618441 USP26Q9BXU7 913 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.51□□□□□ -0.09
MATR3-227ENST00000618441 CDC42BPAQ5VT25 1732 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 UBXN4Q92575 508 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 RILPL2Q969X0 211 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 AK7Q96M32 723 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 USP27XA6NNY8 438 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 SRRTQ9BXP5 876 aaKnown RBP14.51□□□□□ -0.09
MATR3-227ENST00000618441 EXOC6BQ9Y2D4 811 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 ERBINQ96RT1 1412 aa14.51□□□□□ -0.09
MATR3-227ENST00000618441 A0A1B0GUL7 405 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 REC8O95072 547 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 ITSN2Q9NZM3 1697 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 GOLGA6L19H0YKK7 550 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 NOP2P46087 812 aaKnown RBP14.5□□□□□ -0.09
MATR3-227ENST00000618441 TSHZ3Q63HK5 1081 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 PLEKHA4Q9H4M7 779 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 OAS2P29728 719 aaKnown RBP14.5□□□□□ -0.09
MATR3-227ENST00000618441 MNAT1P51948 309 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 FERMT3Q86UX7 667 aa14.5□□□□□ -0.09
MATR3-227ENST00000618441 CTR9Q6PD62 1173 aa14.49□□□□□ -0.09
MATR3-227ENST00000618441 SKILP12757 684 aa14.49□□□□□ -0.09
MATR3-227ENST00000618441 ZSCAN25Q6NSZ9 544 aa14.49□□□□□ -0.09
MATR3-227ENST00000618441 ZBTB40Q9NUA8 1239 aa14.49□□□□□ -0.09
MATR3-227ENST00000618441 KDM5CP41229 1560 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 CLCN6P51797 869 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
MATR3-227ENST00000618441 EPC1Q9H2F5 836 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 GSPT1P15170 499 aaKnown RBP14.48□□□□□ -0.09
MATR3-227ENST00000618441 ERO1AQ96HE7 468 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 YY1AP1Q9H869 796 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 ADGRF5Q8IZF2 1346 aa14.48□□□□□ -0.09
MATR3-227ENST00000618441 WDR33Q9C0J8 1336 aaKnown RBP14.48□□□□□ -0.09
MATR3-227ENST00000618441 ZCCHC11Q5TAX3 1644 aaKnown RBP14.48□□□□□ -0.09
MATR3-227ENST00000618441 BRD1O95696 1058 aa14.47□□□□□ -0.09
MATR3-227ENST00000618441 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
MATR3-227ENST00000618441 PNMA6AP0CW24 399 aaPredicted RBP14.47□□□□□ -0.09
MATR3-227ENST00000618441 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
MATR3-227ENST00000618441 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
MATR3-227ENST00000618441 BECN2A8MW95 431 aa14.47□□□□□ -0.09
MATR3-227ENST00000618441 CCDC172P0C7W6 258 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms