RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 CENPHQ9H3R5 247 aa20.33■□□□□ 0.84
HMGXB3-206ENST00000613459 SHTN1A0MZ66 631 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 ANKRD62A6NC57 917 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 PAF1Q8N7H5 531 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 CGNQ9P2M7 1197 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 NKTRP30414 1462 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 FGFR1OPO95684 399 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 CASTP20810 708 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 TRIM21P19474 475 aaKnown RBP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 TMEM57Q8N5G2 664 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 SFPQP23246 707 aaKnown RBP eCLIP20.32■□□□□ 0.84
HMGXB3-206ENST00000613459 TAX1BP1Q86VP1 789 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 RAI14Q9P0K7 980 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 TOPBP1Q92547 1522 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 ERICH4A6NGS2 130 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 STARD3NLO95772 234 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 ANKLE2Q86XL3 938 aa20.31■□□□□ 0.84
HMGXB3-206ENST00000613459 MAP4K4O95819 1239 aaPredicted RBP20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 MYL6BP14649 208 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 PTPN14Q15678 1187 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 WDR97A6NE52 1622 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 SYCE3A1L190 88 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 LRP2BPQ9P2M1 347 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 CCDC61Q9Y6R9 512 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 CFAP100Q494V2 611 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 CCDC83Q8IWF9 413 aa20.3■□□□□ 0.84
HMGXB3-206ENST00000613459 KIF20AO95235 890 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 SPA17Q15506 151 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 AMOTQ4VCS5 1084 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 FKBP15Q5T1M5 1219 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 FILIP1Q7Z7B0 1213 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 TSG101Q99816 390 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 CRACR2AQ9BSW2 395 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 NSD2O96028 1365 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 MPNDQ8N594 471 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 GIMAP7Q8NHV1 300 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
HMGXB3-206ENST00000613459 TNIP1Q15025 636 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 CASQ1P31415 396 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 ZNF76P36508 570 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 VPS36Q86VN1 386 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 KLHL34Q8N239 644 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 NESP48681 1621 aa20.28■□□□□ 0.84
HMGXB3-206ENST00000613459 RAB34Q9BZG1 259 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 KIF18AQ8NI77 898 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 PYM1Q9BRP8 204 aaKnown RBP20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 IL1RAPL2Q9NP60 686 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 POTEB2H3BUK9 544 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 DCAF8L1A6NGE4 600 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 KIF5CO60282 957 aa20.27■□□□□ 0.84
HMGXB3-206ENST00000613459 CAVIN2O95810 425 aa20.27■□□□□ 0.83
HMGXB3-206ENST00000613459 FAM107BQ9H098 131 aa20.27■□□□□ 0.83
HMGXB3-206ENST00000613459 DDX19AQ9NUU7 478 aaKnown RBP20.27■□□□□ 0.83
HMGXB3-206ENST00000613459 SSBP05455 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 MCM5P33992 734 aa20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 SEC63Q9UGP8 760 aaKnown RBP20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 PTPRCP08575 1304 aa20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 CALCOCO1Q9P1Z2 691 aa20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 IFIT1P09914 478 aaKnown RBP20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 DDX54Q8TDD1 881 aaKnown RBP20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 RNF41Q9H4P4 317 aaPredicted RBP20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
HMGXB3-206ENST00000613459 TMOD2Q9NZR1 351 aa20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 GSDMDP57764 484 aa20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 CCDC91Q7Z6B0 441 aa20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 NUDT16Q96DE0 195 aaKnown RBP20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 RARSP54136 660 aaKnown RBP20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 SEPT11Q9NVA2 429 aaKnown RBP20.25■□□□□ 0.83
HMGXB3-206ENST00000613459 IDH1O75874 414 aaKnown RBP20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 PRDM10Q9NQV6 1147 aa20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 NAIPQ13075 1403 aa20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 EPRSP07814 1512 aaKnown RBP20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 GOLGA6L9A6NEM1 432 aa20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
HMGXB3-206ENST00000613459 MICALCLQ6ZW33 695 aa20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 HMGXB3Q12766 1538 aa20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 LIMCH1Q9UPQ0 1083 aa20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 MPHOSPH10O00566 681 aaKnown RBP20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 CAVIN4Q5BKX8 364 aa20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 C8orf76Q96K31 380 aa20.23■□□□□ 0.83
HMGXB3-206ENST00000613459 NUTM1Q86Y26 1132 aa20.22■□□□□ 0.83
HMGXB3-206ENST00000613459 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
HMGXB3-206ENST00000613459 TOP1P11387 765 aaKnown RBP20.22■□□□□ 0.83
HMGXB3-206ENST00000613459 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
HMGXB3-206ENST00000613459 USO1O60763 962 aaKnown RBP20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 RRS1Q15050 365 aaKnown RBP20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 CTCFLQ8NI51 663 aaPredicted RBP20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 MAP3K12Q12852 859 aa20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 RBM5P52756 815 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 TMEM266Q2M3C6 531 aa20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 EXOC6BQ9Y2D4 811 aa20.21■□□□□ 0.83
HMGXB3-206ENST00000613459 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms