RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ATP6V1AP38606 617 aa24.31■■□□□ 1.48
SSBP1-215ENST00000612337 ITPK1Q13572 414 aa24.31■■□□□ 1.48
SSBP1-215ENST00000612337 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
SSBP1-215ENST00000612337 DCAF5Q96JK2 942 aa24.3■■□□□ 1.48
SSBP1-215ENST00000612337 GRIN3BO60391 1043 aa24.29■■□□□ 1.48
SSBP1-215ENST00000612337 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
SSBP1-215ENST00000612337 YBX3P16989 372 aaKnown RBP eCLIP24.28■■□□□ 1.48
SSBP1-215ENST00000612337 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
SSBP1-215ENST00000612337 KDRP35968 1356 aa24.28■■□□□ 1.48
SSBP1-215ENST00000612337 GNPATO15228 680 aa24.27■■□□□ 1.48
SSBP1-215ENST00000612337 AEBP1Q8IUX7 1158 aa24.27■■□□□ 1.48
SSBP1-215ENST00000612337 AMER1Q5JTC6 1135 aaPredicted RBP24.26■■□□□ 1.47
SSBP1-215ENST00000612337 ZNF831Q5JPB2 1677 aa24.26■■□□□ 1.47
SSBP1-215ENST00000612337 KDM6AO15550 1401 aaPredicted RBP24.26■■□□□ 1.47
SSBP1-215ENST00000612337 KIF7Q2M1P5 1343 aa24.25■■□□□ 1.47
SSBP1-215ENST00000612337 IL13P35225 146 aa24.24■■□□□ 1.47
SSBP1-215ENST00000612337 SULT6B1Q6IMI4 303 aa24.24■■□□□ 1.47
SSBP1-215ENST00000612337 SLC4A9Q96Q91 983 aa24.24■■□□□ 1.47
SSBP1-215ENST00000612337 CABP4P57796 275 aa24.23■■□□□ 1.47
SSBP1-215ENST00000612337 MTHFSP49914 203 aa24.22■■□□□ 1.47
SSBP1-215ENST00000612337 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
SSBP1-215ENST00000612337 RBM42Q9BTD8 480 aaKnown RBP24.22■■□□□ 1.47
SSBP1-215ENST00000612337 RC3H1Q5TC82 1133 aaKnown RBP24.2■■□□□ 1.46
SSBP1-215ENST00000612337 RTCBQ9Y3I0 505 aaKnown RBP24.2■■□□□ 1.46
SSBP1-215ENST00000612337 COL5A3P25940 1745 aaPredicted RBP24.2■■□□□ 1.46
SSBP1-215ENST00000612337 CNTNAP4Q9C0A0 1308 aa24.18■■□□□ 1.46
SSBP1-215ENST00000612337 TRAPPC3LQ5T215 181 aa24.18■■□□□ 1.46
SSBP1-215ENST00000612337 ADRA2BP18089 450 aa24.17■■□□□ 1.46
SSBP1-215ENST00000612337 PER1O15534 1290 aaPredicted RBP24.16■■□□□ 1.46
SSBP1-215ENST00000612337 NFATC2IPQ8NCF5 419 aa24.16■■□□□ 1.46
SSBP1-215ENST00000612337 MMP10P09238 476 aa24.15■■□□□ 1.46
SSBP1-215ENST00000612337 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
SSBP1-215ENST00000612337 SCN11AQ9UI33 1791 aa24.14■■□□□ 1.46
SSBP1-215ENST00000612337 RPS6KA4O75676 772 aa24.14■■□□□ 1.45
SSBP1-215ENST00000612337 ARHGEF1Q92888 912 aaKnown RBP24.14■■□□□ 1.45
SSBP1-215ENST00000612337 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.45
SSBP1-215ENST00000612337 PTCD1O75127 700 aaKnown RBP24.13■■□□□ 1.45
SSBP1-215ENST00000612337 AKAP4Q5JQC9 854 aa24.13■■□□□ 1.45
SSBP1-215ENST00000612337 NLGN1Q8N2Q7 840 aa24.13■■□□□ 1.45
SSBP1-215ENST00000612337 GIGYF1O75420 1035 aaPredicted RBP24.12■■□□□ 1.45
SSBP1-215ENST00000612337 CICQ96RK0 1608 aaPredicted RBP24.1■■□□□ 1.45
SSBP1-215ENST00000612337 KIF13BQ9NQT8 1826 aa24.1■■□□□ 1.45
SSBP1-215ENST00000612337 RFC4P35249 363 aa24.1■■□□□ 1.45
SSBP1-215ENST00000612337 CC2D1BQ5T0F9 858 aaKnown RBP24.1■■□□□ 1.45
SSBP1-215ENST00000612337 HMOX1P09601 288 aa24.09■■□□□ 1.45
SSBP1-215ENST00000612337 GYS1P13807 737 aa24.09■■□□□ 1.45
SSBP1-215ENST00000612337 CRKLP46109 303 aaKnown RBP24.09■■□□□ 1.45
SSBP1-215ENST00000612337 TJP1Q07157 1748 aa24.09■■□□□ 1.45
SSBP1-215ENST00000612337 C4AP0C0L4 1744 aa24.08■■□□□ 1.45
SSBP1-215ENST00000612337 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
SSBP1-215ENST00000612337 SLC52A2Q9HAB3 445 aa24.08■■□□□ 1.45
SSBP1-215ENST00000612337 WWC3Q9ULE0 1092 aa24.08■■□□□ 1.45
SSBP1-215ENST00000612337 ATP10DQ9P241 1426 aa24.08■■□□□ 1.44
SSBP1-215ENST00000612337 NPC1L1Q9UHC9 1359 aa24.07■■□□□ 1.44
SSBP1-215ENST00000612337 LGR6Q9HBX8 967 aa24.07■■□□□ 1.44
SSBP1-215ENST00000612337 C10orf71Q711Q0 1435 aa24.07■■□□□ 1.44
SSBP1-215ENST00000612337 PXDNLA1KZ92 1463 aa24.07■■□□□ 1.44
SSBP1-215ENST00000612337 MRC1P22897 1456 aa24.07■■□□□ 1.44
SSBP1-215ENST00000612337 TGFB2P61812 414 aa24.06■■□□□ 1.44
SSBP1-215ENST00000612337 KIAA1551Q9HCM1 1747 aa24.06■■□□□ 1.44
SSBP1-215ENST00000612337 ADCY9O60503 1353 aa24.05■■□□□ 1.44
SSBP1-215ENST00000612337 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
SSBP1-215ENST00000612337 RNMTO43148 476 aaKnown RBP24.05■■□□□ 1.44
SSBP1-215ENST00000612337 MTHFSDQ2M296 383 aaKnown RBP24.04■■□□□ 1.44
SSBP1-215ENST00000612337 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
SSBP1-215ENST00000612337 PARP3Q9Y6F1 533 aa24.04■■□□□ 1.44
SSBP1-215ENST00000612337 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
SSBP1-215ENST00000612337 ADAMTS7Q9UKP4 1686 aa24.03■■□□□ 1.44
SSBP1-215ENST00000612337 N4BP2Q86UW6 1770 aaPredicted RBP24.03■■□□□ 1.44
SSBP1-215ENST00000612337 INTS5Q6P9B9 1019 aaKnown RBP24.02■■□□□ 1.44
SSBP1-215ENST00000612337 CEP350Q5VT06 3117 aa24.02■■□□□ 1.44
SSBP1-215ENST00000612337 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
SSBP1-215ENST00000612337 SRP68Q9UHB9 627 aaKnown RBP24.01■■□□□ 1.43
SSBP1-215ENST00000612337 USP42Q9H9J4 1324 aaKnown RBP24.01■■□□□ 1.43
SSBP1-215ENST00000612337 A0A0G2JLW4 131 aa24■■□□□ 1.43
SSBP1-215ENST00000612337 DNAJC10Q8IXB1 793 aa24■■□□□ 1.43
SSBP1-215ENST00000612337 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
SSBP1-215ENST00000612337 SLC39A6Q13433 755 aa23.99■■□□□ 1.43
SSBP1-215ENST00000612337 FKBP8Q14318 412 aa23.99■■□□□ 1.43
SSBP1-215ENST00000612337 KCPQ6ZWJ8 1503 aa23.99■■□□□ 1.43
SSBP1-215ENST00000612337 BCS1LQ9Y276 419 aa23.98■■□□□ 1.43
SSBP1-215ENST00000612337 CYP19A1P11511 503 aaPredicted RBP23.97■■□□□ 1.43
SSBP1-215ENST00000612337 DPEP1P16444 411 aa23.97■■□□□ 1.43
SSBP1-215ENST00000612337 BRCA1P38398 1863 aaKnown RBP23.96■■□□□ 1.43
SSBP1-215ENST00000612337 SOS1Q07889 1333 aaPredicted RBP23.96■■□□□ 1.43
SSBP1-215ENST00000612337 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
SSBP1-215ENST00000612337 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
SSBP1-215ENST00000612337 DDR1Q08345 913 aa23.95■■□□□ 1.42
SSBP1-215ENST00000612337 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
SSBP1-215ENST00000612337 ZPR1O75312 459 aa23.94■■□□□ 1.42
SSBP1-215ENST00000612337 ZNF526Q8TF50 670 aaPredicted RBP23.94■■□□□ 1.42
SSBP1-215ENST00000612337 UBR2Q8IWV8 1755 aa23.93■■□□□ 1.42
SSBP1-215ENST00000612337 KCNA3P22001 575 aa23.93■■□□□ 1.42
SSBP1-215ENST00000612337 TM4SF1P30408 202 aa23.93■■□□□ 1.42
SSBP1-215ENST00000612337 GAS2L2Q8NHY3 880 aa23.93■■□□□ 1.42
SSBP1-215ENST00000612337 FCHSD2O94868 740 aa23.92■■□□□ 1.42
SSBP1-215ENST00000612337 USPL1Q5W0Q7 1092 aa23.92■■□□□ 1.42
SSBP1-215ENST00000612337 GNAT3A8MTJ3 354 aa23.91■■□□□ 1.42
SSBP1-215ENST00000612337 POLRMTO00411 1230 aaKnown RBP23.91■■□□□ 1.42
SSBP1-215ENST00000612337 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms