RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 PDILTQ8N807 584 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 SDF4Q9BRK5 362 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 TAX1BP1Q86VP1 789 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 WASLO00401 505 aaPredicted RBP11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 NAT10Q9H0A0 1025 aaKnown RBP11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 FANCAO15360 1455 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 CSPG5O95196 566 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 SEPT6Q14141 434 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC158Q5M9N0 1113 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 MPRIPQ6WCQ1 1025 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 TSPYL1Q9H0U9 437 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC39Q9UFE4 941 aa11.14□□□□□ -0.63
SRGAP2B-204ENST00000612199 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 ATP2C2O75185 946 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 EZRP15311 586 aaKnown RBP11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 XBP1P17861 261 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 CDR1P51861 262 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 BICDL1Q6ZP65 573 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 FAM83GA6ND36 823 aa11.13□□□□□ -0.63
SRGAP2B-204ENST00000612199 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
SRGAP2B-204ENST00000612199 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
SRGAP2B-204ENST00000612199 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
SRGAP2B-204ENST00000612199 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
SRGAP2B-204ENST00000612199 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 K7ELQ4 463 aaPredicted RBP11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 SMC1AQ14683 1233 aaKnown RBP11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 BRMS1Q9HCU9 246 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 UNC13AQ9UPW8 1703 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 STK24Q9Y6E0 443 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 MPNDQ8N594 471 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 CYP46A1Q9Y6A2 500 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 ABCC11Q96J66 1382 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 FAM13BQ9NYF5 915 aa11.11□□□□□ -0.63
SRGAP2B-204ENST00000612199 KINO60870 393 aaKnown RBP11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 C14orf93Q9H972 538 aaKnown RBP11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 RNF187Q5TA31 235 aaPredicted RBP11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 PEG3Q9GZU2 1588 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 ANKRD1Q15327 319 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 BANK1Q8NDB2 785 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 TAF12Q16514 161 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC112Q8NEF3 446 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 CCDC175P0C221 793 aa11.1□□□□□ -0.63
SRGAP2B-204ENST00000612199 H0YHG0 523 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 OLFM4Q6UX06 510 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 ZNF76P36508 570 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 CEP126Q9P2H0 1117 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 AEBP1Q8IUX7 1158 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 ADAMTS2O95450 1211 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 TRIM27P14373 513 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 ARGLU1Q9NWB6 273 aaPredicted RBP11.09□□□□□ -0.63
SRGAP2B-204ENST00000612199 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 UPF3BQ9BZI7 483 aaKnown RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 BRPF3Q9ULD4 1205 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 SCAF11Q99590 1463 aaKnown RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 AXDND1Q5T1B0 1012 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 MNS1Q8NEH6 495 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 SIRT1Q96EB6 747 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 ALDH1L2Q3SY69 923 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 TRIM5Q9C035 493 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 ATP10BO94823 1461 aa11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 PRKCSHP14314 528 aaPredicted RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 MTERF4Q7Z6M4 381 aaKnown RBP11.08□□□□□ -0.64
SRGAP2B-204ENST00000612199 NKTRP30414 1462 aaKnown RBP11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 JMYQ8N9B5 988 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 TMCO4Q5TGY1 634 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 MYD88Q99836 296 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 MYO6Q9UM54 1294 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 ANXA1P04083 346 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 SEPT10Q9P0V9 454 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 ACEP12821 1306 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 PIBF1Q8WXW3 757 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 MAPK8IP2Q13387 824 aaPredicted RBP11.07□□□□□ -0.64
SRGAP2B-204ENST00000612199 BLOC1S2Q6QNY1 142 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
SRGAP2B-204ENST00000612199 ZSCAN31Q96LW9 406 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms