RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ANO8Q9HCE9 1232 aaPredicted RBP7.69□□□□□ -1.18
SNX13-213ENST00000611725 ECHDC1Q9NTX5 307 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 KIF3AQ9Y496 699 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 BAG4O95429 457 aaKnown RBP7.69□□□□□ -1.18
SNX13-213ENST00000611725 KIAA2012Q0VF49 1180 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 GLIPR1L2Q4G1C9 344 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 TAF7LQ5H9L4 462 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 CWC27Q6UX04 472 aaKnown RBP7.69□□□□□ -1.18
SNX13-213ENST00000611725 BABAM1Q9NWV8 329 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 KLHL40Q2TBA0 621 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 VWDEQ8N2E2 1590 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 SOS1Q07889 1333 aaPredicted RBP7.69□□□□□ -1.18
SNX13-213ENST00000611725 RTL1A6NKG5 1358 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 IP6K1Q92551 441 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 SIL1Q9H173 461 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
SNX13-213ENST00000611725 SPG7Q9UQ90 795 aa7.69□□□□□ -1.18
SNX13-213ENST00000611725 WDR33Q9C0J8 1336 aaKnown RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 INO80Q9ULG1 1556 aaPredicted RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 MAP4K4O95819 1239 aaPredicted RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 HECW2Q9P2P5 1572 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 IL17REQ8NFR9 667 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 NEUROD6Q96NK8 337 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 CHPF2Q9P2E5 772 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 LRRC59Q96AG4 307 aaKnown RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 USP26Q9BXU7 913 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 ESPNB1AK53 854 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 HSP90B1P14625 803 aaKnown RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 LARP1Q6PKG0 1096 aaKnown RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 IGSF1Q8N6C5 1336 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 HOXB7P09629 217 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 GSPT1P15170 499 aaKnown RBP7.68□□□□□ -1.18
SNX13-213ENST00000611725 LINS1Q8NG48 757 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 ANKRD24Q8TF21 1146 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 ESYT1Q9BSJ8 1104 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 CYP46A1Q9Y6A2 500 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 ARHGEF40Q8TER5 1519 aa7.68□□□□□ -1.18
SNX13-213ENST00000611725 ALDH1L1O75891 902 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 RAB3GAP1Q15042 981 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 NBPF6Q5VWK0 638 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 NBPF4Q96M43 638 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 MAP3K5Q99683 1374 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 HIP1O00291 1037 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 FIBPO43427 364 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 MYL6BP14649 208 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 MSH6P52701 1360 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 KIF24Q5T7B8 1368 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 TULP4Q9NRJ4 1543 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 KDM5AP29375 1690 aaKnown RBP7.67□□□□□ -1.18
SNX13-213ENST00000611725 ANAPC15P60006 121 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 AKAP4Q5JQC9 854 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 PLEKHG1Q9ULL1 1385 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 PDCP20941 246 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 TMX3Q96JJ7 454 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 PSMA5P28066 241 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 E9PCH4 1651 aa7.67□□□□□ -1.18
SNX13-213ENST00000611725 PNMA6EA0A0J9YXQ4 647 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 USP44Q9H0E7 712 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 HYPKQ9NX55 129 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 KSR2Q6VAB6 950 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 KRT28Q7Z3Y7 464 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 MED14O60244 1454 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 USP6P35125 1406 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 NBPF7P0C2Y1 421 aaPredicted RBP7.66□□□□□ -1.18
SNX13-213ENST00000611725 JAKMIP1Q96N16 626 aaKnown RBP7.66□□□□□ -1.18
SNX13-213ENST00000611725 PANK2Q9BZ23 570 aa7.66□□□□□ -1.18
SNX13-213ENST00000611725 PRPF40BQ6NWY9 871 aaKnown RBP7.66□□□□□ -1.18
SNX13-213ENST00000611725 CHMLP26374 656 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 FAM184AQ8NB25 1140 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 CDK12Q9NYV4 1490 aaPredicted RBP7.65□□□□□ -1.18
SNX13-213ENST00000611725 SETBP1Q9Y6X0 1596 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 CABP4P57796 275 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 CHMP4CQ96CF2 233 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 C19orf44Q9H6X5 657 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 MAP3K2Q9Y2U5 619 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 ARHGEF10O15013 1369 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 ABCA6Q8N139 1617 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 LRRFIP1Q32MZ4 808 aaKnown RBP7.65□□□□□ -1.18
SNX13-213ENST00000611725 BLOC1S2Q6QNY1 142 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 DNAJC2Q99543 621 aaKnown RBP7.65□□□□□ -1.18
SNX13-213ENST00000611725 LGR6Q9HBX8 967 aa7.65□□□□□ -1.18
SNX13-213ENST00000611725 EVA1CP58658 441 aa7.65□□□□□ -1.19
SNX13-213ENST00000611725 IFNL2Q8IZJ0 200 aa7.65□□□□□ -1.19
SNX13-213ENST00000611725 CPSF1Q10570 1443 aaKnown RBP7.65□□□□□ -1.19
SNX13-213ENST00000611725 H3BQV1 296 aa7.65□□□□□ -1.19
SNX13-213ENST00000611725 IFFO2Q5TF58 517 aa7.65□□□□□ -1.19
SNX13-213ENST00000611725 TOM1L2Q6ZVM7 507 aa7.65□□□□□ -1.19
SNX13-213ENST00000611725 ZGPATQ8N5A5 531 aaKnown RBP7.65□□□□□ -1.19
SNX13-213ENST00000611725 ZSCAN31Q96LW9 406 aaPredicted RBP7.65□□□□□ -1.19
SNX13-213ENST00000611725 CCDC8Q9H0W5 538 aaPredicted RBP7.65□□□□□ -1.19
SNX13-213ENST00000611725 PTPRMP28827 1452 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 LIMCH1Q9UPQ0 1083 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 CCDC173Q0VFZ6 552 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 POLR1AO95602 1720 aaPredicted RBP7.64□□□□□ -1.19
SNX13-213ENST00000611725 SSH3Q8TE77 659 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 BOLA2Q9H3K6 86 aa7.64□□□□□ -1.19
SNX13-213ENST00000611725 PDRG1Q9NUG6 133 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms