RNA–Protein interactions for RNA: ENST00000610738.5

COLCA2-204, Transcript of colorectal cancer associated 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLCA2, Length 975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-204ENST00000610738 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
COLCA2-204ENST00000610738 DCAF5Q96JK2 942 aa22.24■■□□□ 1.15
COLCA2-204ENST00000610738 HMGB2P26583 209 aaKnown RBP22.23■■□□□ 1.15
COLCA2-204ENST00000610738 POLD1P28340 1107 aa22.23■■□□□ 1.15
COLCA2-204ENST00000610738 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
COLCA2-204ENST00000610738 COL3A1P02461 1466 aaPredicted RBP22.22■■□□□ 1.15
COLCA2-204ENST00000610738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
COLCA2-204ENST00000610738 CABP4P57796 275 aa22.22■■□□□ 1.15
COLCA2-204ENST00000610738 AMOTQ4VCS5 1084 aa22.22■■□□□ 1.15
COLCA2-204ENST00000610738 ERVV-2B6SEH9 535 aa22.21■■□□□ 1.15
COLCA2-204ENST00000610738 GNPATO15228 680 aa22.21■■□□□ 1.15
COLCA2-204ENST00000610738 C1orf141Q5JVX7 400 aa22.21■■□□□ 1.15
COLCA2-204ENST00000610738 LGR6Q9HBX8 967 aa22.21■■□□□ 1.15
COLCA2-204ENST00000610738 DIAPH1O60610 1272 aaKnown RBP22.2■■□□□ 1.14
COLCA2-204ENST00000610738 NFATC2IPQ8NCF5 419 aa22.2■■□□□ 1.14
COLCA2-204ENST00000610738 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
COLCA2-204ENST00000610738 PTCD1O75127 700 aaKnown RBP22.19■■□□□ 1.14
COLCA2-204ENST00000610738 HSP90AB1P08238 724 aaKnown RBP22.19■■□□□ 1.14
COLCA2-204ENST00000610738 NPC1L1Q9UHC9 1359 aa22.19■■□□□ 1.14
COLCA2-204ENST00000610738 MTHFSDQ2M296 383 aaKnown RBP22.18■■□□□ 1.14
COLCA2-204ENST00000610738 UBR3Q6ZT12 1888 aa22.17■■□□□ 1.14
COLCA2-204ENST00000610738 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
COLCA2-204ENST00000610738 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
COLCA2-204ENST00000610738 UTRNP46939 3433 aa22.15■■□□□ 1.14
COLCA2-204ENST00000610738 SLC39A6Q13433 755 aa22.14■■□□□ 1.13
COLCA2-204ENST00000610738 AKAP4Q5JQC9 854 aa22.14■■□□□ 1.13
COLCA2-204ENST00000610738 WWC3Q9ULE0 1092 aa22.14■■□□□ 1.13
COLCA2-204ENST00000610738 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
COLCA2-204ENST00000610738 SSFA2P28290 1259 aa22.13■■□□□ 1.13
COLCA2-204ENST00000610738 FLAD1Q8NFF5 587 aa22.13■■□□□ 1.13
COLCA2-204ENST00000610738 CHD4Q14839 1912 aa22.13■■□□□ 1.13
COLCA2-204ENST00000610738 YBX3P16989 372 aaKnown RBP eCLIP22.12■■□□□ 1.13
COLCA2-204ENST00000610738 GPR162Q16538 588 aa22.12■■□□□ 1.13
COLCA2-204ENST00000610738 SLC52A2Q9HAB3 445 aa22.1■■□□□ 1.13
COLCA2-204ENST00000610738 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
COLCA2-204ENST00000610738 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
COLCA2-204ENST00000610738 CRKLP46109 303 aaKnown RBP22.08■■□□□ 1.13
COLCA2-204ENST00000610738 ARHGEF1Q92888 912 aaKnown RBP22.08■■□□□ 1.13
COLCA2-204ENST00000610738 PHACTR3Q96KR7 559 aa22.08■■□□□ 1.13
COLCA2-204ENST00000610738 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
COLCA2-204ENST00000610738 MRC1P22897 1456 aa22.08■■□□□ 1.12
COLCA2-204ENST00000610738 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
COLCA2-204ENST00000610738 COL5A3P25940 1745 aaPredicted RBP22.07■■□□□ 1.12
COLCA2-204ENST00000610738 DNAJC10Q8IXB1 793 aa22.07■■□□□ 1.12
COLCA2-204ENST00000610738 TJP1Q07157 1748 aa22.06■■□□□ 1.12
COLCA2-204ENST00000610738 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
COLCA2-204ENST00000610738 RPS6KA4O75676 772 aa22.05■■□□□ 1.12
COLCA2-204ENST00000610738 MMP10P09238 476 aa22.05■■□□□ 1.12
COLCA2-204ENST00000610738 PRKAR2BP31323 418 aa22.05■■□□□ 1.12
COLCA2-204ENST00000610738 TRAPPC3LQ5T215 181 aa22.05■■□□□ 1.12
COLCA2-204ENST00000610738 MYH14Q7Z406 1995 aaKnown RBP22.05■■□□□ 1.12
COLCA2-204ENST00000610738 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
COLCA2-204ENST00000610738 INTS5Q6P9B9 1019 aaKnown RBP22.04■■□□□ 1.12
COLCA2-204ENST00000610738 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
COLCA2-204ENST00000610738 RSPH6AQ9H0K4 717 aa22.04■■□□□ 1.12
COLCA2-204ENST00000610738 KCPQ6ZWJ8 1503 aa22.04■■□□□ 1.12
COLCA2-204ENST00000610738 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
COLCA2-204ENST00000610738 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
COLCA2-204ENST00000610738 GYS1P13807 737 aa22.02■■□□□ 1.12
COLCA2-204ENST00000610738 ZNF784Q8NCA9 323 aaPredicted RBP22.02■■□□□ 1.12
COLCA2-204ENST00000610738 CD2APQ9Y5K6 639 aa22.02■■□□□ 1.12
COLCA2-204ENST00000610738 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
COLCA2-204ENST00000610738 RFC4P35249 363 aa22■■□□□ 1.11
COLCA2-204ENST00000610738 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-204ENST00000610738 U2AF1L5P0DN76 240 aaPredicted RBP21.99■■□□□ 1.11
COLCA2-204ENST00000610738 U2AF1Q01081 240 aaKnown RBP eCLIP21.99■■□□□ 1.11
COLCA2-204ENST00000610738 CFAP53Q96M91 514 aa21.99■■□□□ 1.11
COLCA2-204ENST00000610738 C4AP0C0L4 1744 aa21.99■■□□□ 1.11
COLCA2-204ENST00000610738 GNAT3A8MTJ3 354 aa21.98■■□□□ 1.11
COLCA2-204ENST00000610738 KCNQ3O43525 872 aa21.98■■□□□ 1.11
COLCA2-204ENST00000610738 CYP19A1P11511 503 aaPredicted RBP21.98■■□□□ 1.11
COLCA2-204ENST00000610738 FKBP8Q14318 412 aa21.98■■□□□ 1.11
COLCA2-204ENST00000610738 ZBTB1Q9Y2K1 713 aa21.98■■□□□ 1.11
COLCA2-204ENST00000610738 ADRA2BP18089 450 aa21.97■■□□□ 1.11
COLCA2-204ENST00000610738 GAS2L2Q8NHY3 880 aa21.97■■□□□ 1.11
COLCA2-204ENST00000610738 CCDC87Q9NVE4 849 aa21.97■■□□□ 1.11
COLCA2-204ENST00000610738 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
COLCA2-204ENST00000610738 VIRMAQ69YN4 1812 aaKnown RBP21.96■■□□□ 1.11
COLCA2-204ENST00000610738 DDR1Q08345 913 aa21.95■■□□□ 1.1
COLCA2-204ENST00000610738 DCTN1Q14203 1278 aa21.95■■□□□ 1.1
COLCA2-204ENST00000610738 ZNF496Q96IT1 587 aaPredicted RBP21.95■■□□□ 1.1
COLCA2-204ENST00000610738 SOS1Q07889 1333 aaPredicted RBP21.95■■□□□ 1.1
COLCA2-204ENST00000610738 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
COLCA2-204ENST00000610738 MCM10Q7L590 875 aa21.94■■□□□ 1.1
COLCA2-204ENST00000610738 NLGN1Q8N2Q7 840 aa21.94■■□□□ 1.1
COLCA2-204ENST00000610738 GRIN3BO60391 1043 aa21.93■■□□□ 1.1
COLCA2-204ENST00000610738 TEFQ10587 303 aa21.93■■□□□ 1.1
COLCA2-204ENST00000610738 USPL1Q5W0Q7 1092 aa21.93■■□□□ 1.1
COLCA2-204ENST00000610738 C10orf71Q711Q0 1435 aa21.93■■□□□ 1.1
COLCA2-204ENST00000610738 CEMIPQ8WUJ3 1361 aa21.92■■□□□ 1.1
COLCA2-204ENST00000610738 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
COLCA2-204ENST00000610738 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
COLCA2-204ENST00000610738 NUDCQ9Y266 331 aa21.92■■□□□ 1.1
COLCA2-204ENST00000610738 ZNF790Q6PG37 636 aa21.91■■□□□ 1.1
COLCA2-204ENST00000610738 KIAA1551Q9HCM1 1747 aa21.91■■□□□ 1.1
COLCA2-204ENST00000610738 UBR2Q8IWV8 1755 aa21.9■■□□□ 1.1
COLCA2-204ENST00000610738 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
COLCA2-204ENST00000610738 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
COLCA2-204ENST00000610738 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
COLCA2-204ENST00000610738 COL15A1P39059 1388 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms