RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 KIF20BQ96Q89 1820 aa21.77■■□□□ 1.08
HDDC2-203ENST00000608284 RFC4P35249 363 aa21.76■■□□□ 1.07
HDDC2-203ENST00000608284 TNNT2P45379 298 aaPredicted RBP21.76■■□□□ 1.07
HDDC2-203ENST00000608284 PLEKHO1Q53GL0 409 aaPredicted RBP21.76■■□□□ 1.07
HDDC2-203ENST00000608284 CEP350Q5VT06 3117 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 ADRA2BP18089 450 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 ARHGAP27Q6ZUM4 889 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 BCS1LQ9Y276 419 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 PARP3Q9Y6F1 533 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 TAF1LQ8IZX4 1826 aa21.75■■□□□ 1.07
HDDC2-203ENST00000608284 NCAPD2Q15021 1401 aa21.74■■□□□ 1.07
HDDC2-203ENST00000608284 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
HDDC2-203ENST00000608284 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
HDDC2-203ENST00000608284 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
HDDC2-203ENST00000608284 CABP4P57796 275 aa21.73■■□□□ 1.07
HDDC2-203ENST00000608284 EIF4A2Q14240 407 aaKnown RBP21.73■■□□□ 1.07
HDDC2-203ENST00000608284 ITGB4P16144 1822 aa21.73■■□□□ 1.07
HDDC2-203ENST00000608284 A0A0G2JLW4 131 aa21.72■■□□□ 1.07
HDDC2-203ENST00000608284 AMOTQ4VCS5 1084 aa21.72■■□□□ 1.07
HDDC2-203ENST00000608284 PLEKHG2Q9H7P9 1386 aa21.72■■□□□ 1.07
HDDC2-203ENST00000608284 PKD1L3Q7Z443 1732 aa21.72■■□□□ 1.07
HDDC2-203ENST00000608284 FCHSD2O94868 740 aa21.71■■□□□ 1.07
HDDC2-203ENST00000608284 APLP1P51693 650 aa21.71■■□□□ 1.07
HDDC2-203ENST00000608284 ARHGEF1Q92888 912 aaKnown RBP21.71■■□□□ 1.07
HDDC2-203ENST00000608284 KIF3CO14782 793 aa21.7■■□□□ 1.06
HDDC2-203ENST00000608284 RPS6KA4O75676 772 aa21.7■■□□□ 1.06
HDDC2-203ENST00000608284 TOGARAM1Q9Y4F4 1720 aa21.69■■□□□ 1.06
HDDC2-203ENST00000608284 UBR3Q6ZT12 1888 aa21.69■■□□□ 1.06
HDDC2-203ENST00000608284 TOMM70O94826 608 aa21.69■■□□□ 1.06
HDDC2-203ENST00000608284 MTHFSP49914 203 aa21.69■■□□□ 1.06
HDDC2-203ENST00000608284 TRIM26Q12899 539 aaPredicted RBP21.69■■□□□ 1.06
HDDC2-203ENST00000608284 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
HDDC2-203ENST00000608284 ZNF530Q6P9A1 599 aaPredicted RBP21.68■■□□□ 1.06
HDDC2-203ENST00000608284 C16orf71Q8IYS4 520 aaPredicted RBP21.68■■□□□ 1.06
HDDC2-203ENST00000608284 CNTNAP4Q9C0A0 1308 aa21.67■■□□□ 1.06
HDDC2-203ENST00000608284 DPEP1P16444 411 aa21.67■■□□□ 1.06
HDDC2-203ENST00000608284 GYS1P13807 737 aa21.66■■□□□ 1.06
HDDC2-203ENST00000608284 PTCD1O75127 700 aaKnown RBP21.65■■□□□ 1.06
HDDC2-203ENST00000608284 PIM2Q9P1W9 311 aa21.65■■□□□ 1.06
HDDC2-203ENST00000608284 PXDNLA1KZ92 1463 aa21.64■■□□□ 1.06
HDDC2-203ENST00000608284 DALRD3Q5D0E6 543 aaKnown RBP21.63■■□□□ 1.05
HDDC2-203ENST00000608284 SLC4A9Q96Q91 983 aa21.63■■□□□ 1.05
HDDC2-203ENST00000608284 MAP2P11137 1827 aaKnown RBP21.63■■□□□ 1.05
HDDC2-203ENST00000608284 KDRP35968 1356 aa21.62■■□□□ 1.05
HDDC2-203ENST00000608284 MORC1Q86VD1 984 aa21.62■■□□□ 1.05
HDDC2-203ENST00000608284 NFATC2IPQ8NCF5 419 aa21.61■■□□□ 1.05
HDDC2-203ENST00000608284 PANK3Q9H999 370 aa21.61■■□□□ 1.05
HDDC2-203ENST00000608284 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
HDDC2-203ENST00000608284 C10orf71Q711Q0 1435 aa21.61■■□□□ 1.05
HDDC2-203ENST00000608284 CRKLP46109 303 aaKnown RBP21.6■■□□□ 1.05
HDDC2-203ENST00000608284 C9orf131Q5VYM1 1079 aa21.6■■□□□ 1.05
HDDC2-203ENST00000608284 KDM2BQ8NHM5 1336 aa21.59■■□□□ 1.05
HDDC2-203ENST00000608284 ZPR1O75312 459 aa21.59■■□□□ 1.05
HDDC2-203ENST00000608284 EIF4G2P78344 907 aaKnown RBP eCLIP21.59■■□□□ 1.052e-6■■■□□ 14.8
HDDC2-203ENST00000608284 RBM46Q8TBY0 533 aaKnown RBP21.58■■□□□ 1.05
HDDC2-203ENST00000608284 NMRK2Q9NPI5 230 aa21.58■■□□□ 1.05
HDDC2-203ENST00000608284 ANKRD26Q9UPS8 1709 aa21.58■■□□□ 1.04
HDDC2-203ENST00000608284 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
HDDC2-203ENST00000608284 KNSTRNQ9Y448 316 aa21.56■■□□□ 1.04
HDDC2-203ENST00000608284 FSTL1Q12841 308 aa21.55■■□□□ 1.04
HDDC2-203ENST00000608284 FKBP8Q14318 412 aa21.55■■□□□ 1.04
HDDC2-203ENST00000608284 RNF181Q9P0P0 153 aa21.55■■□□□ 1.04
HDDC2-203ENST00000608284 SRP68Q9UHB9 627 aaKnown RBP21.55■■□□□ 1.04
HDDC2-203ENST00000608284 USP42Q9H9J4 1324 aaKnown RBP21.55■■□□□ 1.04
HDDC2-203ENST00000608284 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
HDDC2-203ENST00000608284 KCNA3P22001 575 aa21.54■■□□□ 1.04
HDDC2-203ENST00000608284 AEBP1Q8IUX7 1158 aa21.53■■□□□ 1.04
HDDC2-203ENST00000608284 PCGF6Q9BYE7 350 aa21.53■■□□□ 1.04
HDDC2-203ENST00000608284 KDM6AO15550 1401 aaPredicted RBP21.53■■□□□ 1.04
HDDC2-203ENST00000608284 AKAP4Q5JQC9 854 aa21.52■■□□□ 1.04
HDDC2-203ENST00000608284 DNAJC5GQ8N7S2 189 aa21.52■■□□□ 1.04
HDDC2-203ENST00000608284 C4AP0C0L4 1744 aa21.52■■□□□ 1.03
HDDC2-203ENST00000608284 N4BP2Q86UW6 1770 aaPredicted RBP21.51■■□□□ 1.03
HDDC2-203ENST00000608284 KIF13BQ9NQT8 1826 aa21.5■■□□□ 1.03
HDDC2-203ENST00000608284 ZNF831Q5JPB2 1677 aa21.5■■□□□ 1.03
HDDC2-203ENST00000608284 HSPA5P11021 654 aaKnown RBP21.5■■□□□ 1.03
HDDC2-203ENST00000608284 CHRNA5P30532 468 aa21.5■■□□□ 1.03
HDDC2-203ENST00000608284 DDR1Q08345 913 aa21.5■■□□□ 1.03
HDDC2-203ENST00000608284 INTS5Q6P9B9 1019 aaKnown RBP21.5■■□□□ 1.03
HDDC2-203ENST00000608284 RRAGCQ9HB90 399 aa21.5■■□□□ 1.03
HDDC2-203ENST00000608284 TM4SF1P30408 202 aa21.49■■□□□ 1.03
HDDC2-203ENST00000608284 USPL1Q5W0Q7 1092 aa21.49■■□□□ 1.03
HDDC2-203ENST00000608284 POLRMTO00411 1230 aaKnown RBP21.48■■□□□ 1.03
HDDC2-203ENST00000608284 DNAJC10Q8IXB1 793 aa21.48■■□□□ 1.03
HDDC2-203ENST00000608284 SLC52A2Q9HAB3 445 aa21.48■■□□□ 1.03
HDDC2-203ENST00000608284 IL13P35225 146 aa21.47■■□□□ 1.03
HDDC2-203ENST00000608284 SMC1BQ8NDV3 1235 aa21.46■■□□□ 1.03
HDDC2-203ENST00000608284 KLRG1Q96E93 195 aa21.46■■□□□ 1.03
HDDC2-203ENST00000608284 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
HDDC2-203ENST00000608284 CYP19A1P11511 503 aaPredicted RBP21.44■■□□□ 1.02
HDDC2-203ENST00000608284 ZC3H4Q9UPT8 1303 aaKnown RBP21.44■■□□□ 1.02
HDDC2-203ENST00000608284 COL5A3P25940 1745 aaPredicted RBP21.43■■□□□ 1.02
HDDC2-203ENST00000608284 H0YIN7 160 aa21.43■■□□□ 1.02
HDDC2-203ENST00000608284 RNMTO43148 476 aaKnown RBP21.43■■□□□ 1.02
HDDC2-203ENST00000608284 LMNB1P20700 586 aa21.43■■□□□ 1.02
HDDC2-203ENST00000608284 TTLL6Q8N841 843 aa21.43■■□□□ 1.02
HDDC2-203ENST00000608284 LGR6Q9HBX8 967 aa21.43■■□□□ 1.02
HDDC2-203ENST00000608284 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
HDDC2-203ENST00000608284 STARD3NLO95772 234 aa21.42■■□□□ 1.02
HDDC2-203ENST00000608284 SERPINB2P05120 415 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms