RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 MCM2P49736 904 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 CEP85Q6P2H3 762 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 ARHGAP45Q92619 1136 aa12.44□□□□□ -0.42
CTCFL-216ENST00000608263 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-216ENST00000608263 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 GNL2Q13823 731 aaKnown RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 CAMK4Q16566 473 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 BECN2A8MW95 431 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 GSPT1P15170 499 aaKnown RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 SF3A1Q15459 793 aaKnown RBP12.43□□□□□ -0.42
CTCFL-216ENST00000608263 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 PLEKHF1Q96S99 279 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 UHRF1BP1LA0JNW5 1464 aa12.43□□□□□ -0.42
CTCFL-216ENST00000608263 WDR33Q9C0J8 1336 aaKnown RBP12.42□□□□□ -0.42
CTCFL-216ENST00000608263 TCEANC2Q96MN5 208 aa12.42□□□□□ -0.42
CTCFL-216ENST00000608263 NEUROD6Q96NK8 337 aa12.42□□□□□ -0.42
CTCFL-216ENST00000608263 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-216ENST00000608263 TRPM1Q7Z4N2 1603 aa12.42□□□□□ -0.42
CTCFL-216ENST00000608263 GOLGA6L19H0YKK7 550 aa12.42□□□□□ -0.42
CTCFL-216ENST00000608263 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
CTCFL-216ENST00000608263 DDX17Q92841 729 aaKnown RBP12.42□□□□□ -0.42
CTCFL-216ENST00000608263 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
CTCFL-216ENST00000608263 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
CTCFL-216ENST00000608263 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
CTCFL-216ENST00000608263 PRDM10Q9NQV6 1147 aa12.41□□□□□ -0.42
CTCFL-216ENST00000608263 RBSNQ9H1K0 784 aa12.41□□□□□ -0.42
CTCFL-216ENST00000608263 CPA1P15085 419 aa12.41□□□□□ -0.42
CTCFL-216ENST00000608263 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
CTCFL-216ENST00000608263 LARP1BQ659C4 914 aaKnown RBP12.4□□□□□ -0.42
CTCFL-216ENST00000608263 AACSQ86V21 672 aa12.4□□□□□ -0.42
CTCFL-216ENST00000608263 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
CTCFL-216ENST00000608263 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
CTCFL-216ENST00000608263 HCLS1P14317 486 aaPredicted RBP12.4□□□□□ -0.42
CTCFL-216ENST00000608263 BICDL1Q6ZP65 573 aa12.4□□□□□ -0.42
CTCFL-216ENST00000608263 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
CTCFL-216ENST00000608263 CCDC8Q9H0W5 538 aaPredicted RBP12.4□□□□□ -0.43
CTCFL-216ENST00000608263 IL13P35225 146 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 MTHFSDQ2M296 383 aaKnown RBP12.39□□□□□ -0.43
CTCFL-216ENST00000608263 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 JARID2Q92833 1246 aaPredicted RBP12.39□□□□□ -0.43
CTCFL-216ENST00000608263 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
CTCFL-216ENST00000608263 DDX11Q96FC9 970 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 BOLA2Q9H3K6 86 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 SASS6Q6UVJ0 657 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 PDRG1Q9NUG6 133 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 TFIP11Q9UBB9 837 aaKnown RBP12.39□□□□□ -0.43
CTCFL-216ENST00000608263 YEATS2Q9ULM3 1422 aa12.39□□□□□ -0.43
CTCFL-216ENST00000608263 ORAI2Q96SN7 254 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 NPATQ14207 1427 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 NRDCO43847 1150 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 RNF20Q5VTR2 975 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 NECAB1Q8N987 351 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 MSH6P52701 1360 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 VPS37DQ86XT2 251 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
CTCFL-216ENST00000608263 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 CNPY2Q9Y2B0 182 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 RAD21O60216 631 aa12.37□□□□□ -0.43
CTCFL-216ENST00000608263 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-216ENST00000608263 KDM5AP29375 1690 aaKnown RBP12.37□□□□□ -0.43
CTCFL-216ENST00000608263 ZMYND15Q9H091 742 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 PTPRCP08575 1304 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 FSD2A1L4K1 749 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 USP48Q86UV5 1035 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 TTC21BQ7Z4L5 1316 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
CTCFL-216ENST00000608263 ADCY10Q96PN6 1610 aa12.36□□□□□ -0.43
CTCFL-216ENST00000608263 SYNMO15061 1565 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 PNMA6EA0A0J9YXQ4 647 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 YTHDC2Q9H6S0 1430 aaKnown RBP12.35□□□□□ -0.43
CTCFL-216ENST00000608263 LTKP29376 864 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 STK11IPQ8N1F8 1099 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 LRRC59Q96AG4 307 aaKnown RBP12.35□□□□□ -0.43
CTCFL-216ENST00000608263 APPP05067 770 aa12.35□□□□□ -0.43
CTCFL-216ENST00000608263 ADCY5O95622 1261 aa12.34□□□□□ -0.43
CTCFL-216ENST00000608263 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms