RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 PDCP20941 246 aa13.05□□□□□ -0.32
SHANK2-219ENST00000606715 FILIP1LQ4L180 1135 aa13.05□□□□□ -0.32
SHANK2-219ENST00000606715 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
SHANK2-219ENST00000606715 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
SHANK2-219ENST00000606715 PIP4K2AP48426 406 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-219ENST00000606715 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
SHANK2-219ENST00000606715 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
SHANK2-219ENST00000606715 ABCF2Q9UG63 623 aa13.05□□□□□ -0.32
SHANK2-219ENST00000606715 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
SHANK2-219ENST00000606715 HYPKQ9NX55 129 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 AKAP2Q9Y2D5 859 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 ATP7AQ04656 1500 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 TSHZ2Q9NRE2 1034 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 A0A087WZG4 1122 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 NCKAP5LQ9HCH0 1330 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
SHANK2-219ENST00000606715 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
SHANK2-219ENST00000606715 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
SHANK2-219ENST00000606715 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 ZNF771Q7L3S4 317 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-219ENST00000606715 CTNNA3Q9UI47 895 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 DBF4Q9UBU7 674 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-219ENST00000606715 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
SHANK2-219ENST00000606715 TTLL5Q6EMB2 1281 aa13.02□□□□□ -0.32
SHANK2-219ENST00000606715 ZNF622Q969S3 477 aaKnown RBP eCLIP13.02□□□□□ -0.32
SHANK2-219ENST00000606715 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-219ENST00000606715 TRPM2O94759 1503 aa13.02□□□□□ -0.32
SHANK2-219ENST00000606715 RAB11FIP3O75154 756 aa13.02□□□□□ -0.32
SHANK2-219ENST00000606715 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.32
SHANK2-219ENST00000606715 STIM1Q13586 685 aa13.02□□□□□ -0.32
SHANK2-219ENST00000606715 PDZRN3Q9UPQ7 1066 aa13.02□□□□□ -0.32
SHANK2-219ENST00000606715 STK38Q15208 465 aa13.02□□□□□ -0.33
SHANK2-219ENST00000606715 RABEP1Q15276 862 aa13.02□□□□□ -0.33
SHANK2-219ENST00000606715 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.33
SHANK2-219ENST00000606715 SMARCE1Q969G3 411 aa13.02□□□□□ -0.33
SHANK2-219ENST00000606715 IDH1O75874 414 aaKnown RBP13.02□□□□□ -0.33
SHANK2-219ENST00000606715 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
SHANK2-219ENST00000606715 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 EIF2AK4Q9P2K8 1649 aaKnown RBP13.01□□□□□ -0.33
SHANK2-219ENST00000606715 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
SHANK2-219ENST00000606715 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 BCAR3O75815 825 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 HSPA2P54652 639 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 IL16Q14005 1332 aa13.01□□□□□ -0.33
SHANK2-219ENST00000606715 KINO60870 393 aaKnown RBP13□□□□□ -0.33
SHANK2-219ENST00000606715 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
SHANK2-219ENST00000606715 SLF2Q8IX21 1173 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 NEFHP12036 1026 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 MNS1Q8NEH6 495 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 AIDAQ96BJ3 306 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 PDIA4P13667 645 aaKnown RBP13□□□□□ -0.33
SHANK2-219ENST00000606715 MCM10Q7L590 875 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
SHANK2-219ENST00000606715 PTPRCP08575 1304 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 ACBD3Q9H3P7 528 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
SHANK2-219ENST00000606715 DRC1Q96MC2 740 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
SHANK2-219ENST00000606715 KIF1BPQ96EK5 621 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
SHANK2-219ENST00000606715 CA8P35219 290 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 KRT32Q14532 448 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 AACSQ86V21 672 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 SEPT11Q9NVA2 429 aaKnown RBP12.99□□□□□ -0.33
SHANK2-219ENST00000606715 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 FEZ1Q99689 392 aa12.99□□□□□ -0.33
SHANK2-219ENST00000606715 MYO1BO43795 1136 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 KCNA6P17658 529 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 POLD1P28340 1107 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 RFC4P35249 363 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 ZRSR2Q15696 482 aaKnown RBP12.98□□□□□ -0.33
SHANK2-219ENST00000606715 MAPKBP1O60336 1514 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 ANKRD18AQ8IVF6 992 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
SHANK2-219ENST00000606715 CDKL5O76039 1030 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CUL5Q93034 780 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 C1orf115Q9H7X2 142 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 LUC7LQ9NQ29 371 aaKnown RBP12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CDCA7Q9BWT1 371 aaPredicted RBP12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CYP46A1Q9Y6A2 500 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CCDC96Q2M329 555 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 CEBPZQ03701 1054 aaKnown RBP12.97□□□□□ -0.33
SHANK2-219ENST00000606715 DNAAF4Q8WXU2 420 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 VTI1AQ96AJ9 217 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
SHANK2-219ENST00000606715 ANKRD62A6NC57 917 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
SHANK2-219ENST00000606715 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 ST5P78524 1137 aa12.96□□□□□ -0.33
SHANK2-219ENST00000606715 STK3Q13188 491 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms