RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 LINC00116Q8NCU8 138 aa14.32□□□□□ -0.12
FARP1-240ENST00000602263 GIGYF1O75420 1035 aaPredicted RBP14.31□□□□□ -0.12
FARP1-240ENST00000602263 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
FARP1-240ENST00000602263 AMIGO3Q86WK7 504 aa14.31□□□□□ -0.12
FARP1-240ENST00000602263 ATG3Q9NT62 314 aa14.31□□□□□ -0.12
FARP1-240ENST00000602263 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
FARP1-240ENST00000602263 ERVV-2B6SEH9 535 aa14.3□□□□□ -0.12
FARP1-240ENST00000602263 C1QTNF8P60827 252 aa14.3□□□□□ -0.12
FARP1-240ENST00000602263 ITPK1Q13572 414 aa14.3□□□□□ -0.12
FARP1-240ENST00000602263 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
FARP1-240ENST00000602263 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
FARP1-240ENST00000602263 KNSTRNQ9Y448 316 aa14.3□□□□□ -0.12
FARP1-240ENST00000602263 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
FARP1-240ENST00000602263 KDRP35968 1356 aa14.29□□□□□ -0.12
FARP1-240ENST00000602263 C1orf141Q5JVX7 400 aa14.28□□□□□ -0.12
FARP1-240ENST00000602263 SMIM5Q71RC9 77 aa14.28□□□□□ -0.12
FARP1-240ENST00000602263 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
FARP1-240ENST00000602263 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.12
FARP1-240ENST00000602263 SCN11AQ9UI33 1791 aa14.27□□□□□ -0.12
FARP1-240ENST00000602263 CABP4P57796 275 aa14.27□□□□□ -0.13
FARP1-240ENST00000602263 RTCBQ9Y3I0 505 aaKnown RBP14.27□□□□□ -0.13
FARP1-240ENST00000602263 MYH14Q7Z406 1995 aaKnown RBP14.27□□□□□ -0.13
FARP1-240ENST00000602263 KIF13BQ9NQT8 1826 aa14.27□□□□□ -0.13
FARP1-240ENST00000602263 KDM6AO15550 1401 aaPredicted RBP14.26□□□□□ -0.13
FARP1-240ENST00000602263 MMP10P09238 476 aa14.26□□□□□ -0.13
FARP1-240ENST00000602263 MTHFSP49914 203 aa14.26□□□□□ -0.13
FARP1-240ENST00000602263 TRAPPC3LQ5T215 181 aa14.26□□□□□ -0.13
FARP1-240ENST00000602263 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
FARP1-240ENST00000602263 C4AP0C0L4 1744 aa14.25□□□□□ -0.13
FARP1-240ENST00000602263 ADRA2BP18089 450 aa14.25□□□□□ -0.13
FARP1-240ENST00000602263 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
FARP1-240ENST00000602263 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
FARP1-240ENST00000602263 CNTNAP4Q9C0A0 1308 aa14.24□□□□□ -0.13
FARP1-240ENST00000602263 CICQ96RK0 1608 aaPredicted RBP14.24□□□□□ -0.13
FARP1-240ENST00000602263 RC3H1Q5TC82 1133 aaKnown RBP14.24□□□□□ -0.13
FARP1-240ENST00000602263 NLGN1Q8N2Q7 840 aa14.24□□□□□ -0.13
FARP1-240ENST00000602263 WWC3Q9ULE0 1092 aa14.24□□□□□ -0.13
FARP1-240ENST00000602263 N4BP2Q86UW6 1770 aaPredicted RBP14.24□□□□□ -0.13
FARP1-240ENST00000602263 RFC4P35249 363 aa14.23□□□□□ -0.13
FARP1-240ENST00000602263 SLC4A9Q96Q91 983 aa14.22□□□□□ -0.13
FARP1-240ENST00000602263 GPBP1L1Q9HC44 474 aaPredicted RBP14.22□□□□□ -0.13
FARP1-240ENST00000602263 TJP1Q07157 1748 aa14.21□□□□□ -0.13
FARP1-240ENST00000602263 KIAA1551Q9HCM1 1747 aa14.21□□□□□ -0.13
FARP1-240ENST00000602263 PTCD1O75127 700 aaKnown RBP14.21□□□□□ -0.13
FARP1-240ENST00000602263 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
FARP1-240ENST00000602263 IL13P35225 146 aa14.21□□□□□ -0.13
FARP1-240ENST00000602263 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
FARP1-240ENST00000602263 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
FARP1-240ENST00000602263 CEP350Q5VT06 3117 aa14.21□□□□□ -0.14
FARP1-240ENST00000602263 ADCY9O60503 1353 aa14.21□□□□□ -0.14
FARP1-240ENST00000602263 KIF7Q2M1P5 1343 aa14.2□□□□□ -0.14
FARP1-240ENST00000602263 PXDNLA1KZ92 1463 aa14.2□□□□□ -0.14
FARP1-240ENST00000602263 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
FARP1-240ENST00000602263 CCDC87Q9NVE4 849 aa14.2□□□□□ -0.14
FARP1-240ENST00000602263 C10orf71Q711Q0 1435 aa14.2□□□□□ -0.14
FARP1-240ENST00000602263 BRCA1P38398 1863 aaKnown RBP14.2□□□□□ -0.14
FARP1-240ENST00000602263 GYS1P13807 737 aa14.19□□□□□ -0.14
FARP1-240ENST00000602263 TGFB2P61812 414 aa14.19□□□□□ -0.14
FARP1-240ENST00000602263 AKAP4Q5JQC9 854 aa14.19□□□□□ -0.14
FARP1-240ENST00000602263 PARP3Q9Y6F1 533 aa14.19□□□□□ -0.14
FARP1-240ENST00000602263 CRKLP46109 303 aaKnown RBP14.18□□□□□ -0.14
FARP1-240ENST00000602263 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
FARP1-240ENST00000602263 ARFGEF1Q9Y6D6 1849 aa14.18□□□□□ -0.14
FARP1-240ENST00000602263 SLC52A2Q9HAB3 445 aa14.17□□□□□ -0.14
FARP1-240ENST00000602263 MRC1P22897 1456 aa14.17□□□□□ -0.14
FARP1-240ENST00000602263 A0A0G2JLW4 131 aa14.16□□□□□ -0.14
FARP1-240ENST00000602263 HMOX1P09601 288 aa14.16□□□□□ -0.14
FARP1-240ENST00000602263 BCS1LQ9Y276 419 aa14.16□□□□□ -0.14
FARP1-240ENST00000602263 USP42Q9H9J4 1324 aaKnown RBP14.15□□□□□ -0.14
FARP1-240ENST00000602263 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
FARP1-240ENST00000602263 CC2D1BQ5T0F9 858 aaKnown RBP14.15□□□□□ -0.14
FARP1-240ENST00000602263 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
FARP1-240ENST00000602263 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
FARP1-240ENST00000602263 ZPR1O75312 459 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 FCHSD2O94868 740 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 DPEP1P16444 411 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 ARHGAP27Q6ZUM4 889 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 DNAJC10Q8IXB1 793 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 SRP68Q9UHB9 627 aaKnown RBP14.13□□□□□ -0.15
FARP1-240ENST00000602263 UBR2Q8IWV8 1755 aa14.13□□□□□ -0.15
FARP1-240ENST00000602263 FKBP8Q14318 412 aa14.12□□□□□ -0.15
FARP1-240ENST00000602263 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
FARP1-240ENST00000602263 LGR6Q9HBX8 967 aa14.12□□□□□ -0.15
FARP1-240ENST00000602263 NPC1L1Q9UHC9 1359 aa14.11□□□□□ -0.15
FARP1-240ENST00000602263 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
FARP1-240ENST00000602263 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
FARP1-240ENST00000602263 PER1O15534 1290 aaPredicted RBP14.11□□□□□ -0.15
FARP1-240ENST00000602263 SLC39A6Q13433 755 aa14.11□□□□□ -0.15
FARP1-240ENST00000602263 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
FARP1-240ENST00000602263 PIM2Q9P1W9 311 aa14.11□□□□□ -0.15
FARP1-240ENST00000602263 DDR1Q08345 913 aa14.1□□□□□ -0.15
FARP1-240ENST00000602263 TTC5Q8N0Z6 440 aa14.1□□□□□ -0.15
FARP1-240ENST00000602263 SOS1Q07889 1333 aaPredicted RBP14.1□□□□□ -0.15
FARP1-240ENST00000602263 COL15A1P39059 1388 aa14.09□□□□□ -0.15
FARP1-240ENST00000602263 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 CYP19A1P11511 503 aaPredicted RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 DALRD3Q5D0E6 543 aaKnown RBP14.09□□□□□ -0.15
FARP1-240ENST00000602263 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
FARP1-240ENST00000602263 VSIG10Q8N0Z9 540 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms