RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
FARP1-229ENST00000600190 GNPATO15228 680 aa25.85■■□□□ 1.73
FARP1-229ENST00000600190 IGSF1Q8N6C5 1336 aa25.83■■□□□ 1.73
FARP1-229ENST00000600190 WWC3Q9ULE0 1092 aa25.82■■□□□ 1.72
FARP1-229ENST00000600190 PLEKHO1Q53GL0 409 aaPredicted RBP25.81■■□□□ 1.72
FARP1-229ENST00000600190 ERVV-2B6SEH9 535 aa25.8■■□□□ 1.72
FARP1-229ENST00000600190 RBM42Q9BTD8 480 aaKnown RBP25.8■■□□□ 1.72
FARP1-229ENST00000600190 HSP90AB1P08238 724 aaKnown RBP25.79■■□□□ 1.72
FARP1-229ENST00000600190 MORC1Q86VD1 984 aa25.79■■□□□ 1.72
FARP1-229ENST00000600190 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
FARP1-229ENST00000600190 PLEKHG2Q9H7P9 1386 aa25.79■■□□□ 1.72
FARP1-229ENST00000600190 TRAPPC3LQ5T215 181 aa25.77■■□□□ 1.72
FARP1-229ENST00000600190 ZNF530Q6P9A1 599 aaPredicted RBP25.77■■□□□ 1.72
FARP1-229ENST00000600190 RTCBQ9Y3I0 505 aaKnown RBP25.77■■□□□ 1.72
FARP1-229ENST00000600190 AMOTQ4VCS5 1084 aa25.76■■□□□ 1.71
FARP1-229ENST00000600190 SLC4A9Q96Q91 983 aa25.76■■□□□ 1.71
FARP1-229ENST00000600190 ATP10DQ9P241 1426 aa25.76■■□□□ 1.71
FARP1-229ENST00000600190 MMP10P09238 476 aa25.75■■□□□ 1.71
FARP1-229ENST00000600190 CABP4P57796 275 aa25.75■■□□□ 1.71
FARP1-229ENST00000600190 KDRP35968 1356 aa25.74■■□□□ 1.71
FARP1-229ENST00000600190 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
FARP1-229ENST00000600190 MTHFSP49914 203 aa25.73■■□□□ 1.71
FARP1-229ENST00000600190 C1orf141Q5JVX7 400 aa25.72■■□□□ 1.71
FARP1-229ENST00000600190 GPBP1L1Q9HC44 474 aaPredicted RBP25.72■■□□□ 1.71
FARP1-229ENST00000600190 KNSTRNQ9Y448 316 aa25.72■■□□□ 1.71
FARP1-229ENST00000600190 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
FARP1-229ENST00000600190 CEP350Q5VT06 3117 aa25.71■■□□□ 1.71
FARP1-229ENST00000600190 ZNF526Q8TF50 670 aaPredicted RBP25.71■■□□□ 1.71
FARP1-229ENST00000600190 ZEB1P37275 1124 aaPredicted RBP25.7■■□□□ 1.7
FARP1-229ENST00000600190 RC3H1Q5TC82 1133 aaKnown RBP25.7■■□□□ 1.7
FARP1-229ENST00000600190 SULT6B1Q6IMI4 303 aa25.7■■□□□ 1.7
FARP1-229ENST00000600190 NLGN1Q8N2Q7 840 aa25.7■■□□□ 1.7
FARP1-229ENST00000600190 ARHGEF1Q92888 912 aaKnown RBP25.7■■□□□ 1.7
FARP1-229ENST00000600190 PTCD1O75127 700 aaKnown RBP25.68■■□□□ 1.7
FARP1-229ENST00000600190 RFC4P35249 363 aa25.68■■□□□ 1.7
FARP1-229ENST00000600190 NFATC2IPQ8NCF5 419 aa25.68■■□□□ 1.7
FARP1-229ENST00000600190 ZNF831Q5JPB2 1677 aa25.68■■□□□ 1.7
FARP1-229ENST00000600190 CNTNAP4Q9C0A0 1308 aa25.67■■□□□ 1.7
FARP1-229ENST00000600190 RPS6KA4O75676 772 aa25.67■■□□□ 1.7
FARP1-229ENST00000600190 ADRA2BP18089 450 aa25.67■■□□□ 1.7
FARP1-229ENST00000600190 COL5A3P25940 1745 aaPredicted RBP25.66■■□□□ 1.7
FARP1-229ENST00000600190 ADCY9O60503 1353 aa25.66■■□□□ 1.7
FARP1-229ENST00000600190 CICQ96RK0 1608 aaPredicted RBP25.66■■□□□ 1.7
FARP1-229ENST00000600190 IL13P35225 146 aa25.65■■□□□ 1.7
FARP1-229ENST00000600190 A0A0G2JLW4 131 aa25.64■■□□□ 1.7
FARP1-229ENST00000600190 GYS1P13807 737 aa25.64■■□□□ 1.7
FARP1-229ENST00000600190 TGFB2P61812 414 aa25.63■■□□□ 1.69
FARP1-229ENST00000600190 PXDNLA1KZ92 1463 aa25.63■■□□□ 1.69
FARP1-229ENST00000600190 CCDC87Q9NVE4 849 aa25.62■■□□□ 1.69
FARP1-229ENST00000600190 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
FARP1-229ENST00000600190 PARP3Q9Y6F1 533 aa25.62■■□□□ 1.69
FARP1-229ENST00000600190 N4BP2Q86UW6 1770 aaPredicted RBP25.61■■□□□ 1.69
FARP1-229ENST00000600190 CRKLP46109 303 aaKnown RBP25.61■■□□□ 1.69
FARP1-229ENST00000600190 MYH14Q7Z406 1995 aaKnown RBP25.61■■□□□ 1.69
FARP1-229ENST00000600190 KIF13BQ9NQT8 1826 aa25.6■■□□□ 1.69
FARP1-229ENST00000600190 AMER1Q5JTC6 1135 aaPredicted RBP25.6■■□□□ 1.69
FARP1-229ENST00000600190 C10orf71Q711Q0 1435 aa25.59■■□□□ 1.69
FARP1-229ENST00000600190 C4AP0C0L4 1744 aa25.58■■□□□ 1.69
FARP1-229ENST00000600190 DPEP1P16444 411 aa25.58■■□□□ 1.69
FARP1-229ENST00000600190 AKAP4Q5JQC9 854 aa25.58■■□□□ 1.69
FARP1-229ENST00000600190 KIAA1551Q9HCM1 1747 aa25.57■■□□□ 1.68
FARP1-229ENST00000600190 SRP68Q9UHB9 627 aaKnown RBP25.57■■□□□ 1.68
FARP1-229ENST00000600190 KIF7Q2M1P5 1343 aa25.57■■□□□ 1.68
FARP1-229ENST00000600190 HMOX1P09601 288 aa25.56■■□□□ 1.68
FARP1-229ENST00000600190 ARHGAP27Q6ZUM4 889 aa25.56■■□□□ 1.68
FARP1-229ENST00000600190 LGR6Q9HBX8 967 aa25.56■■□□□ 1.68
FARP1-229ENST00000600190 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
FARP1-229ENST00000600190 FCHSD2O94868 740 aa25.54■■□□□ 1.68
FARP1-229ENST00000600190 FKBP8Q14318 412 aa25.54■■□□□ 1.68
FARP1-229ENST00000600190 SLC52A2Q9HAB3 445 aa25.54■■□□□ 1.68
FARP1-229ENST00000600190 TJP1Q07157 1748 aa25.54■■□□□ 1.68
FARP1-229ENST00000600190 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
FARP1-229ENST00000600190 USP42Q9H9J4 1324 aaKnown RBP25.53■■□□□ 1.68
FARP1-229ENST00000600190 CC2D1BQ5T0F9 858 aaKnown RBP25.52■■□□□ 1.68
FARP1-229ENST00000600190 DNAJC10Q8IXB1 793 aa25.52■■□□□ 1.68
FARP1-229ENST00000600190 RNMTO43148 476 aaKnown RBP25.5■■□□□ 1.67
FARP1-229ENST00000600190 HSPA6P17066 643 aa25.5■■□□□ 1.67
FARP1-229ENST00000600190 KCNA3P22001 575 aa25.5■■□□□ 1.67
FARP1-229ENST00000600190 SLC39A6Q13433 755 aa25.5■■□□□ 1.67
FARP1-229ENST00000600190 KIF3CO14782 793 aa25.49■■□□□ 1.67
FARP1-229ENST00000600190 DIAPH1O60610 1272 aaKnown RBP25.49■■□□□ 1.67
FARP1-229ENST00000600190 ZPR1O75312 459 aa25.49■■□□□ 1.67
FARP1-229ENST00000600190 DDR1Q08345 913 aa25.49■■□□□ 1.67
FARP1-229ENST00000600190 PER1O15534 1290 aaPredicted RBP25.48■■□□□ 1.67
FARP1-229ENST00000600190 MTHFSDQ2M296 383 aaKnown RBP25.48■■□□□ 1.67
FARP1-229ENST00000600190 PIM2Q9P1W9 311 aa25.48■■□□□ 1.67
FARP1-229ENST00000600190 CNGB1Q14028 1251 aaPredicted RBP25.47■■□□□ 1.67
FARP1-229ENST00000600190 USPL1Q5W0Q7 1092 aa25.47■■□□□ 1.67
FARP1-229ENST00000600190 BRCA1P38398 1863 aaKnown RBP25.47■■□□□ 1.67
FARP1-229ENST00000600190 CYP19A1P11511 503 aaPredicted RBP25.45■■□□□ 1.66
FARP1-229ENST00000600190 TM4SF1P30408 202 aa25.45■■□□□ 1.66
FARP1-229ENST00000600190 DALRD3Q5D0E6 543 aaKnown RBP25.45■■□□□ 1.66
FARP1-229ENST00000600190 VIRMAQ69YN4 1812 aaKnown RBP25.44■■□□□ 1.66
FARP1-229ENST00000600190 SOS1Q07889 1333 aaPredicted RBP25.44■■□□□ 1.66
FARP1-229ENST00000600190 POLRMTO00411 1230 aaKnown RBP25.44■■□□□ 1.66
FARP1-229ENST00000600190 CHRNA5P30532 468 aa25.44■■□□□ 1.66
FARP1-229ENST00000600190 MRC1P22897 1456 aa25.43■■□□□ 1.66
FARP1-229ENST00000600190 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
FARP1-229ENST00000600190 C9orf131Q5VYM1 1079 aa25.42■■□□□ 1.66
FARP1-229ENST00000600190 NARFQ9UHQ1 456 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms