RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 EIF4G2P78344 907 aaKnown RBP eCLIP29.1■■■□□ 2.25
PNKP-212ENST00000599454 KIF13BQ9NQT8 1826 aa29.09■■■□□ 2.25
PNKP-212ENST00000599454 ERVV-2B6SEH9 535 aa29.09■■■□□ 2.25
PNKP-212ENST00000599454 SMIM5Q71RC9 77 aa29.08■■■□□ 2.25
PNKP-212ENST00000599454 ATP10DQ9P241 1426 aa29.08■■■□□ 2.25
PNKP-212ENST00000599454 COL5A3P25940 1745 aaPredicted RBP29.08■■■□□ 2.25
PNKP-212ENST00000599454 KDRP35968 1356 aa29.07■■■□□ 2.24
PNKP-212ENST00000599454 PCGF6Q9BYE7 350 aa29.07■■■□□ 2.24
PNKP-212ENST00000599454 PLEKHO1Q53GL0 409 aaPredicted RBP29.06■■■□□ 2.24
PNKP-212ENST00000599454 DCAF5Q96JK2 942 aa29.06■■■□□ 2.24
PNKP-212ENST00000599454 PANK3Q9H999 370 aa29.05■■■□□ 2.24
PNKP-212ENST00000599454 ADCY9O60503 1353 aa29.04■■■□□ 2.24
PNKP-212ENST00000599454 HSPA5P11021 654 aaKnown RBP29.03■■■□□ 2.24
PNKP-212ENST00000599454 AMOTQ4VCS5 1084 aa29.03■■■□□ 2.24
PNKP-212ENST00000599454 RTCBQ9Y3I0 505 aaKnown RBP29.02■■■□□ 2.24
PNKP-212ENST00000599454 ADRA2BP18089 450 aa29.01■■■□□ 2.23
PNKP-212ENST00000599454 TRAPPC3LQ5T215 181 aa29.01■■■□□ 2.23
PNKP-212ENST00000599454 RC3H1Q5TC82 1133 aaKnown RBP29.01■■■□□ 2.23
PNKP-212ENST00000599454 MYH14Q7Z406 1995 aaKnown RBP29.01■■■□□ 2.23
PNKP-212ENST00000599454 GPBP1L1Q9HC44 474 aaPredicted RBP29■■■□□ 2.23
PNKP-212ENST00000599454 CICQ96RK0 1608 aaPredicted RBP28.99■■■□□ 2.23
PNKP-212ENST00000599454 MMP10P09238 476 aa28.99■■■□□ 2.23
PNKP-212ENST00000599454 ZNF530Q6P9A1 599 aaPredicted RBP28.99■■■□□ 2.23
PNKP-212ENST00000599454 RBM42Q9BTD8 480 aaKnown RBP28.99■■■□□ 2.23
PNKP-212ENST00000599454 KDM6AO15550 1401 aaPredicted RBP28.99■■■□□ 2.23
PNKP-212ENST00000599454 KIAA1551Q9HCM1 1747 aa28.99■■■□□ 2.23
PNKP-212ENST00000599454 CNTNAP4Q9C0A0 1308 aa28.98■■■□□ 2.23
PNKP-212ENST00000599454 MORC1Q86VD1 984 aa28.98■■■□□ 2.23
PNKP-212ENST00000599454 NLGN1Q8N2Q7 840 aa28.98■■■□□ 2.23
PNKP-212ENST00000599454 SLC4A9Q96Q91 983 aa28.98■■■□□ 2.23
PNKP-212ENST00000599454 N4BP2Q86UW6 1770 aaPredicted RBP28.98■■■□□ 2.23
PNKP-212ENST00000599454 CABP4P57796 275 aa28.97■■■□□ 2.23
PNKP-212ENST00000599454 C4AP0C0L4 1744 aa28.97■■■□□ 2.23
PNKP-212ENST00000599454 SCN11AQ9UI33 1791 aa28.96■■■□□ 2.23
PNKP-212ENST00000599454 C1orf141Q5JVX7 400 aa28.95■■■□□ 2.22
PNKP-212ENST00000599454 PXDNLA1KZ92 1463 aa28.94■■■□□ 2.22
PNKP-212ENST00000599454 MTHFSP49914 203 aa28.94■■■□□ 2.22
PNKP-212ENST00000599454 TGFB2P61812 414 aa28.94■■■□□ 2.22
PNKP-212ENST00000599454 BRCA1P38398 1863 aaKnown RBP28.93■■■□□ 2.22
PNKP-212ENST00000599454 RPS6KA4O75676 772 aa28.93■■■□□ 2.22
PNKP-212ENST00000599454 ARHGEF1Q92888 912 aaKnown RBP28.93■■■□□ 2.22
PNKP-212ENST00000599454 WWC3Q9ULE0 1092 aa28.93■■■□□ 2.22
PNKP-212ENST00000599454 KNSTRNQ9Y448 316 aa28.92■■■□□ 2.22
PNKP-212ENST00000599454 C10orf71Q711Q0 1435 aa28.92■■■□□ 2.22
PNKP-212ENST00000599454 RFC4P35249 363 aa28.91■■■□□ 2.22
PNKP-212ENST00000599454 AEBP1Q8IUX7 1158 aa28.91■■■□□ 2.22
PNKP-212ENST00000599454 VIRMAQ69YN4 1812 aaKnown RBP28.91■■■□□ 2.22
PNKP-212ENST00000599454 CCDC87Q9NVE4 849 aa28.9■■■□□ 2.22
PNKP-212ENST00000599454 GYS1P13807 737 aa28.89■■■□□ 2.22
PNKP-212ENST00000599454 SULT6B1Q6IMI4 303 aa28.89■■■□□ 2.22
PNKP-212ENST00000599454 TJP1Q07157 1748 aa28.89■■■□□ 2.21
PNKP-212ENST00000599454 ARFGEF1Q9Y6D6 1849 aa28.87■■■□□ 2.21
PNKP-212ENST00000599454 ZNF526Q8TF50 670 aaPredicted RBP28.87■■■□□ 2.21
PNKP-212ENST00000599454 IL13P35225 146 aa28.86■■■□□ 2.21
PNKP-212ENST00000599454 NFATC2IPQ8NCF5 419 aa28.86■■■□□ 2.21
PNKP-212ENST00000599454 PARP3Q9Y6F1 533 aa28.86■■■□□ 2.21
PNKP-212ENST00000599454 PTCD1O75127 700 aaKnown RBP28.85■■■□□ 2.21
PNKP-212ENST00000599454 CRKLP46109 303 aaKnown RBP28.83■■■□□ 2.21
PNKP-212ENST00000599454 BCS1LQ9Y276 419 aa28.83■■■□□ 2.21
PNKP-212ENST00000599454 A0A0G2JLW4 131 aa28.82■■■□□ 2.2
PNKP-212ENST00000599454 HSPA6P17066 643 aa28.82■■■□□ 2.2
PNKP-212ENST00000599454 AKAP4Q5JQC9 854 aa28.81■■■□□ 2.2
PNKP-212ENST00000599454 CCER1Q8TC90 406 aaPredicted RBP28.81■■■□□ 2.2
PNKP-212ENST00000599454 AMER1Q5JTC6 1135 aaPredicted RBP28.8■■■□□ 2.2
PNKP-212ENST00000599454 DPEP1P16444 411 aa28.79■■■□□ 2.2
PNKP-212ENST00000599454 USP42Q9H9J4 1324 aaKnown RBP28.78■■■□□ 2.2
PNKP-212ENST00000599454 ADAMTS7Q9UKP4 1686 aa28.78■■■□□ 2.2
PNKP-212ENST00000599454 MRC1P22897 1456 aa28.78■■■□□ 2.2
PNKP-212ENST00000599454 KIF3CO14782 793 aa28.77■■■□□ 2.2
PNKP-212ENST00000599454 CEP350Q5VT06 3117 aa28.77■■■□□ 2.2
PNKP-212ENST00000599454 FCHSD2O94868 740 aa28.76■■■□□ 2.19
PNKP-212ENST00000599454 SLC52A2Q9HAB3 445 aa28.76■■■□□ 2.19
PNKP-212ENST00000599454 ARHGAP27Q6ZUM4 889 aa28.75■■■□□ 2.19
PNKP-212ENST00000599454 SRP68Q9UHB9 627 aaKnown RBP28.74■■■□□ 2.19
PNKP-212ENST00000599454 FKBP8Q14318 412 aa28.73■■■□□ 2.19
PNKP-212ENST00000599454 INTS5Q6P9B9 1019 aaKnown RBP28.73■■■□□ 2.19
PNKP-212ENST00000599454 PIM2Q9P1W9 311 aa28.73■■■□□ 2.19
PNKP-212ENST00000599454 KIF7Q2M1P5 1343 aa28.72■■■□□ 2.19
PNKP-212ENST00000599454 KCNA3P22001 575 aa28.72■■■□□ 2.19
PNKP-212ENST00000599454 DDR1Q08345 913 aa28.71■■■□□ 2.19
PNKP-212ENST00000599454 RNMTO43148 476 aaKnown RBP28.7■■■□□ 2.18
PNKP-212ENST00000599454 DNAJC10Q8IXB1 793 aa28.7■■■□□ 2.18
PNKP-212ENST00000599454 LGR6Q9HBX8 967 aa28.7■■■□□ 2.18
PNKP-212ENST00000599454 AFDNP55196 1824 aaKnown RBP28.7■■■□□ 2.18
PNKP-212ENST00000599454 SBF1O95248 1867 aa28.7■■■□□ 2.18
PNKP-212ENST00000599454 ZPR1O75312 459 aa28.69■■■□□ 2.18
PNKP-212ENST00000599454 UBR2Q8IWV8 1755 aa28.69■■■□□ 2.18
PNKP-212ENST00000599454 KCPQ6ZWJ8 1503 aa28.69■■■□□ 2.18
PNKP-212ENST00000599454 SOS1Q07889 1333 aaPredicted RBP28.69■■■□□ 2.18
PNKP-212ENST00000599454 HMOX1P09601 288 aa28.68■■■□□ 2.18
PNKP-212ENST00000599454 DALRD3Q5D0E6 543 aaKnown RBP28.68■■■□□ 2.18
PNKP-212ENST00000599454 TM4SF1P30408 202 aa28.67■■■□□ 2.18
PNKP-212ENST00000599454 POLRMTO00411 1230 aaKnown RBP28.66■■■□□ 2.18
PNKP-212ENST00000599454 DIAPH1O60610 1272 aaKnown RBP28.66■■■□□ 2.18
PNKP-212ENST00000599454 TOMM70O94826 608 aa28.66■■■□□ 2.18
PNKP-212ENST00000599454 CYP19A1P11511 503 aaPredicted RBP28.66■■■□□ 2.18
PNKP-212ENST00000599454 NRXN2Q9P2S2 1712 aa28.66■■■□□ 2.18
PNKP-212ENST00000599454 PER1O15534 1290 aaPredicted RBP28.65■■■□□ 2.18
PNKP-212ENST00000599454 USPL1Q5W0Q7 1092 aa28.65■■■□□ 2.18
PNKP-212ENST00000599454 VSIG10Q8N0Z9 540 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms