RNA–Protein interactions for RNA: ENST00000590238.1

APBA3-206, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 5

Gene APBA3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-206ENST00000590238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.77■■□□□ 1.08
APBA3-206ENST00000590238 ATP6V1AP38606 617 aa21.77■■□□□ 1.08
APBA3-206ENST00000590238 AEBP1Q8IUX7 1158 aa21.77■■□□□ 1.08
APBA3-206ENST00000590238 YBX3P16989 372 aaKnown RBP eCLIP21.76■■□□□ 1.07
APBA3-206ENST00000590238 MTHFSP49914 203 aa21.76■■□□□ 1.07
APBA3-206ENST00000590238 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
APBA3-206ENST00000590238 PLEKHG2Q9H7P9 1386 aa21.74■■□□□ 1.07
APBA3-206ENST00000590238 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
APBA3-206ENST00000590238 SSFA2P28290 1259 aa21.73■■□□□ 1.07
APBA3-206ENST00000590238 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
APBA3-206ENST00000590238 NPC1L1Q9UHC9 1359 aa21.73■■□□□ 1.07
APBA3-206ENST00000590238 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
APBA3-206ENST00000590238 ERVV-2B6SEH9 535 aa21.72■■□□□ 1.07
APBA3-206ENST00000590238 GNPATO15228 680 aa21.72■■□□□ 1.07
APBA3-206ENST00000590238 DCAF5Q96JK2 942 aa21.72■■□□□ 1.07
APBA3-206ENST00000590238 CD2APQ9Y5K6 639 aa21.72■■□□□ 1.07
APBA3-206ENST00000590238 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
APBA3-206ENST00000590238 KDRP35968 1356 aa21.71■■□□□ 1.07
APBA3-206ENST00000590238 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
APBA3-206ENST00000590238 IL13P35225 146 aa21.7■■□□□ 1.06
APBA3-206ENST00000590238 AMOTQ4VCS5 1084 aa21.7■■□□□ 1.06
APBA3-206ENST00000590238 SULT6B1Q6IMI4 303 aa21.7■■□□□ 1.06
APBA3-206ENST00000590238 CABP4P57796 275 aa21.68■■□□□ 1.06
APBA3-206ENST00000590238 COL5A3P25940 1745 aaPredicted RBP21.67■■□□□ 1.06
APBA3-206ENST00000590238 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
APBA3-206ENST00000590238 DIAPH1O60610 1272 aaKnown RBP21.67■■□□□ 1.06
APBA3-206ENST00000590238 ZNF831Q5JPB2 1677 aa21.66■■□□□ 1.06
APBA3-206ENST00000590238 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
APBA3-206ENST00000590238 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
APBA3-206ENST00000590238 WWC3Q9ULE0 1092 aa21.66■■□□□ 1.06
APBA3-206ENST00000590238 MYH14Q7Z406 1995 aaKnown RBP21.65■■□□□ 1.06
APBA3-206ENST00000590238 NFATC2IPQ8NCF5 419 aa21.65■■□□□ 1.06
APBA3-206ENST00000590238 HMOX1P09601 288 aa21.64■■□□□ 1.05
APBA3-206ENST00000590238 RTCBQ9Y3I0 505 aaKnown RBP21.64■■□□□ 1.05
APBA3-206ENST00000590238 SCN11AQ9UI33 1791 aa21.64■■□□□ 1.05
APBA3-206ENST00000590238 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
APBA3-206ENST00000590238 TRAPPC3LQ5T215 181 aa21.63■■□□□ 1.05
APBA3-206ENST00000590238 U2SURPO15042 1029 aaKnown RBP21.62■■□□□ 1.05
APBA3-206ENST00000590238 MMP10P09238 476 aa21.62■■□□□ 1.05
APBA3-206ENST00000590238 ARHGEF1Q92888 912 aaKnown RBP21.62■■□□□ 1.05
APBA3-206ENST00000590238 CFAP53Q96M91 514 aa21.62■■□□□ 1.05
APBA3-206ENST00000590238 DDX10Q13206 875 aaKnown RBP21.61■■□□□ 1.05
APBA3-206ENST00000590238 RC3H1Q5TC82 1133 aaKnown RBP21.61■■□□□ 1.05
APBA3-206ENST00000590238 CNTNAP4Q9C0A0 1308 aa21.6■■□□□ 1.05
APBA3-206ENST00000590238 PPP2R1AP30153 589 aa21.6■■□□□ 1.05
APBA3-206ENST00000590238 C1QTNF8P60827 252 aa21.6■■□□□ 1.05
APBA3-206ENST00000590238 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
APBA3-206ENST00000590238 RPS6KA4O75676 772 aa21.59■■□□□ 1.05
APBA3-206ENST00000590238 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
APBA3-206ENST00000590238 C4AP0C0L4 1744 aa21.58■■□□□ 1.05
APBA3-206ENST00000590238 TJP1Q07157 1748 aa21.58■■□□□ 1.05
APBA3-206ENST00000590238 GYS1P13807 737 aa21.57■■□□□ 1.04
APBA3-206ENST00000590238 AKAP4Q5JQC9 854 aa21.57■■□□□ 1.04
APBA3-206ENST00000590238 NLGN1Q8N2Q7 840 aa21.57■■□□□ 1.04
APBA3-206ENST00000590238 CICQ96RK0 1608 aaPredicted RBP21.57■■□□□ 1.04
APBA3-206ENST00000590238 N4BP2Q86UW6 1770 aaPredicted RBP21.56■■□□□ 1.04
APBA3-206ENST00000590238 KIAA1551Q9HCM1 1747 aa21.56■■□□□ 1.04
APBA3-206ENST00000590238 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
APBA3-206ENST00000590238 ADRA2BP18089 450 aa21.56■■□□□ 1.04
APBA3-206ENST00000590238 RFC4P35249 363 aa21.56■■□□□ 1.04
APBA3-206ENST00000590238 CRKLP46109 303 aaKnown RBP21.56■■□□□ 1.04
APBA3-206ENST00000590238 KIF13BQ9NQT8 1826 aa21.56■■□□□ 1.04
APBA3-206ENST00000590238 COL3A1P02461 1466 aaPredicted RBP21.55■■□□□ 1.04
APBA3-206ENST00000590238 SLC52A2Q9HAB3 445 aa21.54■■□□□ 1.04
APBA3-206ENST00000590238 NUDCQ9Y266 331 aa21.54■■□□□ 1.04
APBA3-206ENST00000590238 ATP10DQ9P241 1426 aa21.54■■□□□ 1.04
APBA3-206ENST00000590238 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
APBA3-206ENST00000590238 SENP3-EIF4A1A0A087X0R7 540 aa21.53■■□□□ 1.04
APBA3-206ENST00000590238 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
APBA3-206ENST00000590238 MTHFSDQ2M296 383 aaKnown RBP21.53■■□□□ 1.04
APBA3-206ENST00000590238 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
APBA3-206ENST00000590238 SLC39A6Q13433 755 aa21.52■■□□□ 1.04
APBA3-206ENST00000590238 A0A0G2JLW4 131 aa21.51■■□□□ 1.03
APBA3-206ENST00000590238 INTS5Q6P9B9 1019 aaKnown RBP21.51■■□□□ 1.03
APBA3-206ENST00000590238 DNAJC10Q8IXB1 793 aa21.51■■□□□ 1.03
APBA3-206ENST00000590238 C10orf71Q711Q0 1435 aa21.51■■□□□ 1.03
APBA3-206ENST00000590238 PARP3Q9Y6F1 533 aa21.5■■□□□ 1.03
APBA3-206ENST00000590238 MRC1P22897 1456 aa21.5■■□□□ 1.03
APBA3-206ENST00000590238 ADCY9O60503 1353 aa21.49■■□□□ 1.03
APBA3-206ENST00000590238 U2AF1L5P0DN76 240 aaPredicted RBP21.49■■□□□ 1.03
APBA3-206ENST00000590238 TGFB2P61812 414 aa21.49■■□□□ 1.03
APBA3-206ENST00000590238 U2AF1Q01081 240 aaKnown RBP eCLIP21.49■■□□□ 1.03
APBA3-206ENST00000590238 CCDC87Q9NVE4 849 aa21.49■■□□□ 1.03
APBA3-206ENST00000590238 ADAMTS7Q9UKP4 1686 aa21.49■■□□□ 1.03
APBA3-206ENST00000590238 FKBP8Q14318 412 aa21.48■■□□□ 1.03
APBA3-206ENST00000590238 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
APBA3-206ENST00000590238 USP42Q9H9J4 1324 aaKnown RBP21.48■■□□□ 1.03
APBA3-206ENST00000590238 KCPQ6ZWJ8 1503 aa21.47■■□□□ 1.03
APBA3-206ENST00000590238 DPEP1P16444 411 aa21.47■■□□□ 1.03
APBA3-206ENST00000590238 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
APBA3-206ENST00000590238 PRKAR2BP31323 418 aa21.46■■□□□ 1.03
APBA3-206ENST00000590238 DDR1Q08345 913 aa21.46■■□□□ 1.03
APBA3-206ENST00000590238 BRCA1P38398 1863 aaKnown RBP21.45■■□□□ 1.02
APBA3-206ENST00000590238 CYP19A1P11511 503 aaPredicted RBP21.45■■□□□ 1.02
APBA3-206ENST00000590238 RALBP1Q15311 655 aa21.45■■□□□ 1.02
APBA3-206ENST00000590238 GPBP1L1Q9HC44 474 aaPredicted RBP21.45■■□□□ 1.02
APBA3-206ENST00000590238 KCNA3P22001 575 aa21.43■■□□□ 1.02
APBA3-206ENST00000590238 USPL1Q5W0Q7 1092 aa21.43■■□□□ 1.02
APBA3-206ENST00000590238 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
APBA3-206ENST00000590238 RSPH6AQ9H0K4 717 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms