RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 KCNQ4P56696 695 aa8.28□□□□□ -1.08
LDLRAD4-213ENST00000590115 MIER1Q8N108 512 aa8.28□□□□□ -1.08
LDLRAD4-213ENST00000590115 LTV1Q96GA3 475 aaPredicted RBP8.28□□□□□ -1.08
LDLRAD4-213ENST00000590115 CCDC88AQ3V6T2 1871 aa8.28□□□□□ -1.08
LDLRAD4-213ENST00000590115 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.08
LDLRAD4-213ENST00000590115 C4BP0C0L5 1744 aa8.27□□□□□ -1.09
LDLRAD4-213ENST00000590115 EXOC5O00471 708 aa8.27□□□□□ -1.09
LDLRAD4-213ENST00000590115 RALBP1Q15311 655 aa8.27□□□□□ -1.09
LDLRAD4-213ENST00000590115 PLEKHF1Q96S99 279 aa8.27□□□□□ -1.09
LDLRAD4-213ENST00000590115 AMPHP49418 695 aa8.26□□□□□ -1.09
LDLRAD4-213ENST00000590115 SLC27A3Q5K4L6 730 aa8.26□□□□□ -1.09
LDLRAD4-213ENST00000590115 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
LDLRAD4-213ENST00000590115 PHACTR3Q96KR7 559 aa8.26□□□□□ -1.09
LDLRAD4-213ENST00000590115 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
LDLRAD4-213ENST00000590115 PDE4DIPQ5VU43 2346 aa8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 TOMM70O94826 608 aa8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 COL23A1Q86Y22 540 aaPredicted RBP8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 PNISRQ8TF01 805 aaKnown RBP8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 TFCP2L1Q9NZI6 479 aa8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 CD2APQ9Y5K6 639 aa8.25□□□□□ -1.09
LDLRAD4-213ENST00000590115 KDM6AO15550 1401 aaPredicted RBP8.24□□□□□ -1.09
LDLRAD4-213ENST00000590115 CYP27B1O15528 508 aa8.24□□□□□ -1.09
LDLRAD4-213ENST00000590115 DIEXFQ68CQ4 756 aaKnown RBP8.24□□□□□ -1.09
LDLRAD4-213ENST00000590115 NMRK2Q9NPI5 230 aa8.24□□□□□ -1.09
LDLRAD4-213ENST00000590115 WWC3Q9ULE0 1092 aa8.24□□□□□ -1.09
LDLRAD4-213ENST00000590115 DIAPH1O60610 1272 aaKnown RBP8.23□□□□□ -1.09
LDLRAD4-213ENST00000590115 HMOX1P09601 288 aa8.23□□□□□ -1.09
LDLRAD4-213ENST00000590115 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
LDLRAD4-213ENST00000590115 VIRMAQ69YN4 1812 aaKnown RBP8.22□□□□□ -1.09
LDLRAD4-213ENST00000590115 PXDNLA1KZ92 1463 aa8.22□□□□□ -1.09
LDLRAD4-213ENST00000590115 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
LDLRAD4-213ENST00000590115 SULT6B1Q6IMI4 303 aa8.22□□□□□ -1.09
LDLRAD4-213ENST00000590115 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
LDLRAD4-213ENST00000590115 C10orf71Q711Q0 1435 aa8.21□□□□□ -1.09
LDLRAD4-213ENST00000590115 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.09
LDLRAD4-213ENST00000590115 MTHFSDQ2M296 383 aaKnown RBP8.21□□□□□ -1.1
LDLRAD4-213ENST00000590115 AMIGO3Q86WK7 504 aa8.21□□□□□ -1.1
LDLRAD4-213ENST00000590115 RBM46Q8TBY0 533 aaKnown RBP8.21□□□□□ -1.1
LDLRAD4-213ENST00000590115 TIAM2Q8IVF5 1701 aa8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 KCPQ6ZWJ8 1503 aa8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 HSPA1BP0DMV9 641 aaKnown RBP8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 IL2RBP14784 551 aa8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 C4AP0C0L4 1744 aa8.2□□□□□ -1.1
LDLRAD4-213ENST00000590115 MRC1P22897 1456 aa8.19□□□□□ -1.1
LDLRAD4-213ENST00000590115 PRKAR2BP31323 418 aa8.19□□□□□ -1.1
LDLRAD4-213ENST00000590115 NKX1-1Q15270 411 aaPredicted RBP8.19□□□□□ -1.1
LDLRAD4-213ENST00000590115 SCN11AQ9UI33 1791 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 ANP32CO43423 234 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 PHKG2P15735 406 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 CCDC146Q8IYE0 955 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 IL17REQ8NFR9 667 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 LGR6Q9HBX8 967 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 CCNL1Q9UK58 526 aaPredicted RBP8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 TRIM35Q9UPQ4 493 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 DICER1Q9UPY3 1922 aaKnown RBP8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 PLEKHG2Q9H7P9 1386 aa8.18□□□□□ -1.1
LDLRAD4-213ENST00000590115 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 CCER2I3L3R5 266 aa8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 U2SURPO15042 1029 aaKnown RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 MSH5O43196 834 aa8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 FSTL1Q12841 308 aa8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 ZCRB1Q8TBF4 217 aaKnown RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 CEMIPQ8WUJ3 1361 aa8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 COL5A3P25940 1745 aaPredicted RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 DLEC1Q9Y238 1755 aa8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
LDLRAD4-213ENST00000590115 FCHSD2O94868 740 aa8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 U2AF1L5P0DN76 240 aaPredicted RBP8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 U2AF1Q01081 240 aaKnown RBP eCLIP8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 SMIM5Q71RC9 77 aa8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 ZNF521Q96K83 1311 aa8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 SLC4A9Q96Q91 983 aa8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.16□□□□□ -1.1
LDLRAD4-213ENST00000590115 TATP17735 454 aaPredicted RBP8.15□□□□□ -1.1
LDLRAD4-213ENST00000590115 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
LDLRAD4-213ENST00000590115 SYTL4Q96C24 671 aaPredicted RBP8.15□□□□□ -1.1
LDLRAD4-213ENST00000590115 THUMPD2Q9BTF0 503 aaKnown RBP8.15□□□□□ -1.1
LDLRAD4-213ENST00000590115 SPINK5Q9NQ38 1064 aaPredicted RBP8.15□□□□□ -1.1
LDLRAD4-213ENST00000590115 KCNQ3O43525 872 aa8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 TMPOP42166 694 aaKnown RBP8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 DDX54Q8TDD1 881 aaKnown RBP8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 CFAP53Q96M91 514 aa8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 RRP7AQ9Y3A4 280 aaKnown RBP8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 AFDNP55196 1824 aaKnown RBP8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 UBR2Q8IWV8 1755 aa8.14□□□□□ -1.11
LDLRAD4-213ENST00000590115 KDM3BQ7LBC6 1761 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 APAF1O14727 1248 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 RNMTO43148 476 aaKnown RBP8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 NFE2L2Q16236 605 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 RAPGEF4Q8WZA2 1011 aa8.13□□□□□ -1.11
LDLRAD4-213ENST00000590115 PIGBQ92521 554 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms