RNA–Protein interactions for RNA: ENST00000589480.5

PRKAR1A-219, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 2

Gene PRKAR1A, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-219	ENST00000589480	RFC4	P35249	363 aa		13.82	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	TGFB2	P61812	414 aa		13.82	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	CCDC87	Q9NVE4	849 aa		13.82	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	PARP3	Q9Y6F1	533 aa		13.82	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	DPEP1	P16444	411 aa		13.81	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	APLP1	P51693	650 aa		13.81	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	ARHGEF1	Q92888	912 aa	Known RBP	13.81	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	POLK	Q9UBT6	870 aa		13.81	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	TOMM70	O94826	608 aa		13.8	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	CABP4	P57796	275 aa		13.8	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.8	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	EIF4A2	Q14240	407 aa	Known RBP	13.79	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.79	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	NMRK2	Q9NPI5	230 aa		13.79	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	ERVV-2	B6SEH9	535 aa		13.78	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	PTCD1	O75127	700 aa	Known RBP	13.78	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	HSP90AB1	P08238	724 aa	Known RBP	13.78	□□□□□ -0.2
PRKAR1A-219	ENST00000589480	RPS6KA4	O75676	772 aa		13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	GYS1	P13807	737 aa		13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	GOLGB1	Q14789	3259 aa	Known RBP	13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	RC3H1	Q5TC82	1133 aa	Known RBP	13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	C9orf131	Q5VYM1	1079 aa		13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	DCAF5	Q96JK2	942 aa		13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	SLC4A9	Q96Q91	983 aa		13.77	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	TAF1L	Q8IZX4	1826 aa		13.76	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	TOGARAM1	Q9Y4F4	1720 aa		13.76	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	PXDNL	A1KZ92	1463 aa		13.76	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	ADRA2B	P18089	450 aa		13.76	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	PIM2	Q9P1W9	311 aa		13.76	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	MTHFS	P49914	203 aa		13.75	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	C1orf141	Q5JVX7	400 aa		13.75	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	ITGB4	P16144	1822 aa		13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	AMOT	Q4VCS5	1084 aa		13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	DALRD3	Q5D0E6	543 aa	Known RBP	13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	SRP68	Q9UHB9	627 aa	Known RBP	13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	UBR3	Q6ZT12	1888 aa		13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	KIF20B	Q96Q89	1820 aa		13.74	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	NCAPD2	Q15021	1401 aa		13.73	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	CNTNAP4	Q9C0A0	1308 aa		13.73	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	CIC	Q96RK0	1608 aa	Predicted RBP	13.73	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	NFATC2IP	Q8NCF5	419 aa		13.73	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	RNF181	Q9P0P0	153 aa		13.73	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	KCNA3	P22001	575 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	CHRNA5	P30532	468 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	CRKL	P46109	303 aa	Known RBP	13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	HTRA3	P83110	453 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	FKBP8	Q14318	412 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	DNAJC5G	Q8N7S2	189 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	RBM46	Q8TBY0	533 aa	Known RBP	13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	RRAGC	Q9HB90	399 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	PKD1L3	Q7Z443	1732 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	C10orf71	Q711Q0	1435 aa		13.72	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	KDR	P35968	1356 aa		13.71	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	KDM2B	Q8NHM5	1336 aa		13.71	□□□□□ -0.21
PRKAR1A-219	ENST00000589480	ZPR1	O75312	459 aa		13.7	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	MORC1	Q86VD1	984 aa		13.7	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	AEBP1	Q8IUX7	1158 aa		13.7	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	PANK3	Q9H999	370 aa		13.7	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	MAP2	P11137	1827 aa	Known RBP	13.69	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	DDR1	Q08345	913 aa		13.69	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	SULT6B1	Q6IMI4	303 aa		13.69	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	CEP350	Q5VT06	3117 aa		13.68	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	CAPN15	O75808	1086 aa		13.68	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	FSTL1	Q12841	308 aa		13.68	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	KLRG1	Q96E93	195 aa		13.68	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	USP42	Q9H9J4	1324 aa	Known RBP	13.67	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	USPL1	Q5W0Q7	1092 aa		13.67	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	DNAJC10	Q8IXB1	793 aa		13.67	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.67	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	PLEKHG2	Q9H7P9	1386 aa		13.67	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	KDM6A	O15550	1401 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	TRIM26	Q12899	539 aa	Predicted RBP	13.66	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	INTS5	Q6P9B9	1019 aa	Known RBP	13.66	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	KCP	Q6ZWJ8	1503 aa		13.65	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	POLRMT	O00411	1230 aa	Known RBP	13.65	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	RASSF7	Q02833	373 aa		13.65	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	SMC1B	Q8NDV3	1235 aa		13.65	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	PCGF6	Q9BYE7	350 aa		13.65	□□□□□ -0.22
PRKAR1A-219	ENST00000589480	TM4SF1	P30408	202 aa		13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	SLC39A6	Q13433	755 aa		13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	TIMELESS	Q9UNS1	1208 aa		13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	C4A	P0C0L4	1744 aa		13.64	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	HSPA5	P11021	654 aa	Known RBP	13.63	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	BICDL1	Q6ZP65	573 aa		13.63	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	LGR6	Q9HBX8	967 aa		13.63	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	KNSTRN	Q9Y448	316 aa		13.63	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	SERPINB2	P05120	415 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	CANX	P27824	592 aa	Known RBP	13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	NFIX	Q14938	502 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	AKAP4	Q5JQC9	854 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	C2CD5	Q86YS7	1000 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	TNS4	Q8IZW8	715 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	SLC52A2	Q9HAB3	445 aa		13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKAR1A-219	ENST00000589480		H0YIN7	160 aa		13.61	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	HMOX1	P09601	288 aa		13.61	□□□□□ -0.23
PRKAR1A-219	ENST00000589480	VEGFA	P15692	232 aa	Predicted RBP	13.61	□□□□□ -0.23

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