RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PIK3R2O00459 728 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 SOCS7O14512 581 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 OIP5O43482 229 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 SCTRP47872 440 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 LBRQ14739 615 aaKnown RBP7.7□□□□□ -1.18
SMAD4-207ENST00000589076 TMEM214Q6NUQ4 689 aaKnown RBP7.7□□□□□ -1.18
SMAD4-207ENST00000589076 CNKSR1Q969H4 720 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 ZSCAN10Q96SZ4 725 aaPredicted RBP7.7□□□□□ -1.18
SMAD4-207ENST00000589076 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 OSBPL3Q9H4L5 887 aa7.7□□□□□ -1.18
SMAD4-207ENST00000589076 TRAK2O60296 914 aa7.69□□□□□ -1.18
SMAD4-207ENST00000589076 ALYREFQ86V81 257 aaKnown RBP7.69□□□□□ -1.18
SMAD4-207ENST00000589076 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
SMAD4-207ENST00000589076 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
SMAD4-207ENST00000589076 CENPCQ03188 943 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 EFHC2Q5JST6 749 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 SPOCK3Q9BQ16 436 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 RRAGCQ9HB90 399 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 GPAMQ9HCL2 828 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
SMAD4-207ENST00000589076 AMPD1P23109 780 aa7.66□□□□□ -1.18
SMAD4-207ENST00000589076 PHKA2P46019 1235 aa7.66□□□□□ -1.18
SMAD4-207ENST00000589076 GOLGA6L1Q8N7Z2 621 aa7.66□□□□□ -1.18
SMAD4-207ENST00000589076 SIRT1Q96EB6 747 aa7.66□□□□□ -1.18
SMAD4-207ENST00000589076 BMP4P12644 408 aa7.65□□□□□ -1.18
SMAD4-207ENST00000589076 EIF4G2P78344 907 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMAD4-207ENST00000589076 USP4Q13107 963 aa7.65□□□□□ -1.18
SMAD4-207ENST00000589076 ATXN7L1Q9ULK2 861 aaPredicted RBP7.65□□□□□ -1.18
SMAD4-207ENST00000589076 ADAM23O75077 832 aa7.64□□□□□ -1.19
SMAD4-207ENST00000589076 IL2RAP01589 272 aa7.64□□□□□ -1.19
SMAD4-207ENST00000589076 KLRG1Q96E93 195 aa7.64□□□□□ -1.19
SMAD4-207ENST00000589076 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
SMAD4-207ENST00000589076 CEP126Q9P2H0 1117 aa7.64□□□□□ -1.19
SMAD4-207ENST00000589076 SLFNL1Q499Z3 407 aa7.63□□□□□ -1.19
SMAD4-207ENST00000589076 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
SMAD4-207ENST00000589076 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
SMAD4-207ENST00000589076 RHBDD1Q8TEB9 315 aa7.62□□□□□ -1.19
SMAD4-207ENST00000589076 RUBCNLQ9H714 662 aa7.62□□□□□ -1.19
SMAD4-207ENST00000589076 DOLKQ9UPQ8 538 aa7.62□□□□□ -1.19
SMAD4-207ENST00000589076 MSX1P28360 303 aa7.61□□□□□ -1.19
SMAD4-207ENST00000589076 C4orf17Q53FE4 359 aa7.61□□□□□ -1.19
SMAD4-207ENST00000589076 MTMR14Q8NCE2 650 aa7.61□□□□□ -1.19
SMAD4-207ENST00000589076 K7ELQ4 463 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-207ENST00000589076 SNRPNP63162 240 aaKnown RBP7.6□□□□□ -1.19
SMAD4-207ENST00000589076 TLR1Q15399 786 aa7.6□□□□□ -1.19
SMAD4-207ENST00000589076 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
SMAD4-207ENST00000589076 SHISA8B8ZZ34 492 aa7.59□□□□□ -1.19
SMAD4-207ENST00000589076 PROCP04070 461 aa7.59□□□□□ -1.19
SMAD4-207ENST00000589076 FGFR3P22607 806 aa7.59□□□□□ -1.19
SMAD4-207ENST00000589076 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
SMAD4-207ENST00000589076 C1orf216Q8TAB5 229 aa7.59□□□□□ -1.19
SMAD4-207ENST00000589076 CCDC85AQ96PX6 553 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-207ENST00000589076 CDCA7Q9BWT1 371 aaPredicted RBP7.59□□□□□ -1.19
SMAD4-207ENST00000589076 NOP53Q9NZM5 478 aaKnown RBP7.59□□□□□ -1.19
SMAD4-207ENST00000589076 GRIN2CQ14957 1233 aa7.58□□□□□ -1.2
SMAD4-207ENST00000589076 SLCO4C1Q6ZQN7 724 aa7.58□□□□□ -1.2
SMAD4-207ENST00000589076 RNF135Q8IUD6 432 aa7.58□□□□□ -1.2
SMAD4-207ENST00000589076 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
SMAD4-207ENST00000589076 FHDC1Q9C0D6 1143 aaPredicted RBP7.58□□□□□ -1.2
SMAD4-207ENST00000589076 HRH3Q9Y5N1 445 aa7.58□□□□□ -1.2
SMAD4-207ENST00000589076 GNB5O14775 395 aa7.57□□□□□ -1.2
SMAD4-207ENST00000589076 CRISPLD1Q9H336 500 aa7.57□□□□□ -1.2
SMAD4-207ENST00000589076 SNRKQ9NRH2 765 aa7.57□□□□□ -1.2
SMAD4-207ENST00000589076 GGA1Q9UJY5 639 aa7.57□□□□□ -1.2
SMAD4-207ENST00000589076 BAG6P46379 1132 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 PLA2G4AP47712 749 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 NBPF1Q3BBV0 1214 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 AIDAQ96BJ3 306 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
SMAD4-207ENST00000589076 PCDHGC4Q9Y5F7 938 aa7.56□□□□□ -1.2
SMAD4-207ENST00000589076 KRBA1A5PL33 1030 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 ITGB2P05107 769 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 THBS1P07996 1170 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 ARAFP10398 606 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 NLRP8Q86W28 1048 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
SMAD4-207ENST00000589076 BNIP3LO60238 219 aa7.54□□□□□ -1.2
SMAD4-207ENST00000589076 UBAP2LQ14157 1087 aaKnown RBP7.54□□□□□ -1.2
SMAD4-207ENST00000589076 MAP7D1Q3KQU3 841 aa7.54□□□□□ -1.2
SMAD4-207ENST00000589076 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-207ENST00000589076 C1orf229Q6ZS94 237 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-207ENST00000589076 GJA3Q9Y6H8 435 aa7.54□□□□□ -1.2
SMAD4-207ENST00000589076 ATXN7O15265 892 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-207ENST00000589076 GPR37L1O60883 481 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 EPXP11678 715 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-207ENST00000589076 ADH6P28332 368 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 CTBSQ01459 385 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 BTBD6Q96KE9 485 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 TBC1D2BQ9UPU7 963 aa7.53□□□□□ -1.2
SMAD4-207ENST00000589076 NEURL1BA8MQ27 555 aa7.52□□□□□ -1.21
SMAD4-207ENST00000589076 C2CD2LO14523 706 aa7.52□□□□□ -1.21
SMAD4-207ENST00000589076 INHAP05111 366 aa7.52□□□□□ -1.21
SMAD4-207ENST00000589076 GDF10P55107 478 aa7.52□□□□□ -1.21
SMAD4-207ENST00000589076 BRPF1P55201 1214 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-207ENST00000589076 ZCCHC2Q9C0B9 1178 aaKnown RBP7.52□□□□□ -1.21
SMAD4-207ENST00000589076 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
SMAD4-207ENST00000589076 COL8A1P27658 744 aa7.51□□□□□ -1.21
SMAD4-207ENST00000589076 SEMA3FQ13275 785 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms