RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 APBA3O96018 575 aa17.49■□□□□ 0.39
NEDD4L-223ENST00000588516 MFAP1P55081 439 aaKnown RBP17.49■□□□□ 0.39
NEDD4L-223ENST00000588516 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
NEDD4L-223ENST00000588516 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
NEDD4L-223ENST00000588516 IFFO2Q5TF58 517 aa17.48■□□□□ 0.39
NEDD4L-223ENST00000588516 SPON1Q9HCB6 807 aa17.48■□□□□ 0.39
NEDD4L-223ENST00000588516 KIF1AQ12756 1690 aa17.48■□□□□ 0.39
NEDD4L-223ENST00000588516 ANKRD45Q5TZF3 282 aa17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 ARHGEF10O15013 1369 aa17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
NEDD4L-223ENST00000588516 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.39
NEDD4L-223ENST00000588516 OVOS2A0A0J9YW53 1432 aa17.46■□□□□ 0.39
NEDD4L-223ENST00000588516 OVOS2Q6IE36 1432 aa17.46■□□□□ 0.39
NEDD4L-223ENST00000588516 LNPKQ9C0E8 428 aa17.46■□□□□ 0.38
NEDD4L-223ENST00000588516 SLKQ9H2G2 1235 aaPredicted RBP17.46■□□□□ 0.38
NEDD4L-223ENST00000588516 SPATA31A5Q5VU36 1347 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 SPATA31A7Q8IWB4 1347 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 SBNO1A3KN83 1393 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 USP6P35125 1406 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 DDX11L8A8MPP1 907 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 CHL1O00533 1208 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 KCNQ2O43526 872 aa17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 HTATSF1O43719 755 aaKnown RBP17.45■□□□□ 0.38
NEDD4L-223ENST00000588516 ACEP12821 1306 aa17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 TNS1Q9HBL0 1735 aaKnown RBP17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 CDC45O75419 566 aa17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 CASC1Q6TDU7 716 aa17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 CHMP4AQ9BY43 222 aa17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 ISY1Q9ULR0 285 aaKnown RBP17.44■□□□□ 0.38
NEDD4L-223ENST00000588516 HMMRO75330 724 aa17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 RRS1Q15050 365 aaKnown RBP17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 FMN2Q9NZ56 1722 aa17.43■□□□□ 0.38
NEDD4L-223ENST00000588516 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
NEDD4L-223ENST00000588516 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
NEDD4L-223ENST00000588516 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
NEDD4L-223ENST00000588516 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 MCM4P33991 863 aa17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 THUMPD2Q9BTF0 503 aaKnown RBP17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
NEDD4L-223ENST00000588516 FLT4P35916 1363 aa17.4■□□□□ 0.38
NEDD4L-223ENST00000588516 HSP90AB1P08238 724 aaKnown RBP17.4■□□□□ 0.38
NEDD4L-223ENST00000588516 IL27Q8NEV9 243 aa17.4■□□□□ 0.38
NEDD4L-223ENST00000588516 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
NEDD4L-223ENST00000588516 ABCA3Q99758 1704 aa17.4■□□□□ 0.38
NEDD4L-223ENST00000588516 FBLN1P23142 703 aa17.39■□□□□ 0.37
NEDD4L-223ENST00000588516 CCT4P50991 539 aaKnown RBP17.39■□□□□ 0.37
NEDD4L-223ENST00000588516 SKOR2Q2VWA4 1001 aaPredicted RBP17.39■□□□□ 0.37
NEDD4L-223ENST00000588516 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
NEDD4L-223ENST00000588516 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
NEDD4L-223ENST00000588516 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
NEDD4L-223ENST00000588516 PRDM11Q9NQV5 511 aa17.37■□□□□ 0.37
NEDD4L-223ENST00000588516 RGPD8O14715 1765 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-223ENST00000588516 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
NEDD4L-223ENST00000588516 THSD7AQ9UPZ6 1657 aa17.36■□□□□ 0.37
NEDD4L-223ENST00000588516 C1QTNF8P60827 252 aa17.36■□□□□ 0.37
NEDD4L-223ENST00000588516 SPATA31A1Q5TZJ5 1347 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 RABEP1Q15276 862 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 STRN4Q9NRL3 753 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 KDRP35968 1356 aa17.35■□□□□ 0.37
NEDD4L-223ENST00000588516 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
NEDD4L-223ENST00000588516 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
NEDD4L-223ENST00000588516 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
NEDD4L-223ENST00000588516 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
NEDD4L-223ENST00000588516 CAMTA1Q9Y6Y1 1673 aa17.34■□□□□ 0.37
NEDD4L-223ENST00000588516 CRB1P82279 1406 aa17.33■□□□□ 0.37
NEDD4L-223ENST00000588516 GOLGA6L3A6NEY3 463 aa17.33■□□□□ 0.36
NEDD4L-223ENST00000588516 GOLGA6L22H0YM25 854 aa17.33■□□□□ 0.36
NEDD4L-223ENST00000588516 AMPHP49418 695 aa17.33■□□□□ 0.36
NEDD4L-223ENST00000588516 TTC22Q5TAA0 569 aa17.33■□□□□ 0.36
NEDD4L-223ENST00000588516 NUP188Q5SRE5 1749 aa17.33■□□□□ 0.36
NEDD4L-223ENST00000588516 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
NEDD4L-223ENST00000588516 RREB1Q92766 1687 aa17.32■□□□□ 0.36
NEDD4L-223ENST00000588516 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
NEDD4L-223ENST00000588516 PLEKHM2Q8IWE5 1019 aa17.32■□□□□ 0.36
NEDD4L-223ENST00000588516 PEAK1Q9H792 1746 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 REC8O95072 547 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 GNAI3P08754 354 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 C1orf115Q9H7X2 142 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
NEDD4L-223ENST00000588516 DDIT3P35638 169 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 HSP90AB2PQ58FF8 381 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 CCDC30Q5VVM6 783 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 CEP85Q6P2H3 762 aa17.3■□□□□ 0.36
NEDD4L-223ENST00000588516 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms