RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 MORC1Q86VD1 984 aa18.78■□□□□ 0.6
HDAC5-208ENST00000588419 RBM42Q9BTD8 480 aaKnown RBP18.78■□□□□ 0.6
HDAC5-208ENST00000588419 N4BP2Q86UW6 1770 aaPredicted RBP18.78■□□□□ 0.6
HDAC5-208ENST00000588419 C4AP0C0L4 1744 aa18.77■□□□□ 0.6
HDAC5-208ENST00000588419 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
HDAC5-208ENST00000588419 SSFA2P28290 1259 aa18.77■□□□□ 0.6
HDAC5-208ENST00000588419 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
HDAC5-208ENST00000588419 ATG3Q9NT62 314 aa18.77■□□□□ 0.6
HDAC5-208ENST00000588419 SCN11AQ9UI33 1791 aa18.76■□□□□ 0.59
HDAC5-208ENST00000588419 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
HDAC5-208ENST00000588419 CD2APQ9Y5K6 639 aa18.76■□□□□ 0.59
HDAC5-208ENST00000588419 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
HDAC5-208ENST00000588419 C1QTNF8P60827 252 aa18.75■□□□□ 0.59
HDAC5-208ENST00000588419 PLEKHO1Q53GL0 409 aaPredicted RBP18.75■□□□□ 0.59
HDAC5-208ENST00000588419 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
HDAC5-208ENST00000588419 CICQ96RK0 1608 aaPredicted RBP18.74■□□□□ 0.59
HDAC5-208ENST00000588419 MYH14Q7Z406 1995 aaKnown RBP18.74■□□□□ 0.59
HDAC5-208ENST00000588419 KDRP35968 1356 aa18.74■□□□□ 0.59
HDAC5-208ENST00000588419 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
HDAC5-208ENST00000588419 KIF13BQ9NQT8 1826 aa18.73■□□□□ 0.59
HDAC5-208ENST00000588419 HSP90AB1P08238 724 aaKnown RBP18.73■□□□□ 0.59
HDAC5-208ENST00000588419 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
HDAC5-208ENST00000588419 KNSTRNQ9Y448 316 aa18.73■□□□□ 0.59
HDAC5-208ENST00000588419 TJP1Q07157 1748 aa18.72■□□□□ 0.59
HDAC5-208ENST00000588419 CABP4P57796 275 aa18.72■□□□□ 0.59
HDAC5-208ENST00000588419 DCAF5Q96JK2 942 aa18.72■□□□□ 0.59
HDAC5-208ENST00000588419 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
HDAC5-208ENST00000588419 ERVV-2B6SEH9 535 aa18.71■□□□□ 0.59
HDAC5-208ENST00000588419 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
HDAC5-208ENST00000588419 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
HDAC5-208ENST00000588419 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
HDAC5-208ENST00000588419 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
HDAC5-208ENST00000588419 MMP10P09238 476 aa18.69■□□□□ 0.58
HDAC5-208ENST00000588419 MTHFSP49914 203 aa18.69■□□□□ 0.58
HDAC5-208ENST00000588419 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
HDAC5-208ENST00000588419 ZNF526Q8TF50 670 aaPredicted RBP18.69■□□□□ 0.58
HDAC5-208ENST00000588419 PTCD1O75127 700 aaKnown RBP18.68■□□□□ 0.58
HDAC5-208ENST00000588419 TRAPPC3LQ5T215 181 aa18.68■□□□□ 0.58
HDAC5-208ENST00000588419 SLC4A9Q96Q91 983 aa18.68■□□□□ 0.58
HDAC5-208ENST00000588419 CNGB1Q14028 1251 aaPredicted RBP18.67■□□□□ 0.58
HDAC5-208ENST00000588419 BRCA1P38398 1863 aaKnown RBP18.66■□□□□ 0.58
HDAC5-208ENST00000588419 KIF7Q2M1P5 1343 aa18.66■□□□□ 0.58
HDAC5-208ENST00000588419 RFC4P35249 363 aa18.65■□□□□ 0.58
HDAC5-208ENST00000588419 CNTNAP4Q9C0A0 1308 aa18.65■□□□□ 0.58
HDAC5-208ENST00000588419 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
HDAC5-208ENST00000588419 IL13P35225 146 aa18.64■□□□□ 0.57
HDAC5-208ENST00000588419 NFATC2IPQ8NCF5 419 aa18.64■□□□□ 0.57
HDAC5-208ENST00000588419 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
HDAC5-208ENST00000588419 GPBP1L1Q9HC44 474 aaPredicted RBP18.64■□□□□ 0.57
HDAC5-208ENST00000588419 HMOX1P09601 288 aa18.63■□□□□ 0.57
HDAC5-208ENST00000588419 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
HDAC5-208ENST00000588419 AMER1Q5JTC6 1135 aaPredicted RBP18.62■□□□□ 0.57
HDAC5-208ENST00000588419 C10orf71Q711Q0 1435 aa18.62■□□□□ 0.57
HDAC5-208ENST00000588419 ARFGEF1Q9Y6D6 1849 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 ADCY9O60503 1353 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 RPS6KA4O75676 772 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 GYS1P13807 737 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 ADRA2BP18089 450 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 CRKLP46109 303 aaKnown RBP18.61■□□□□ 0.57
HDAC5-208ENST00000588419 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
HDAC5-208ENST00000588419 NLGN1Q8N2Q7 840 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 CCDC87Q9NVE4 849 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 BCS1LQ9Y276 419 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
HDAC5-208ENST00000588419 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
HDAC5-208ENST00000588419 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
HDAC5-208ENST00000588419 AKAP4Q5JQC9 854 aa18.59■□□□□ 0.57
HDAC5-208ENST00000588419 AFDNP55196 1824 aaKnown RBP18.58■□□□□ 0.57
HDAC5-208ENST00000588419 ADAMTS7Q9UKP4 1686 aa18.58■□□□□ 0.57
HDAC5-208ENST00000588419 MRC1P22897 1456 aa18.58■□□□□ 0.56
HDAC5-208ENST00000588419 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
HDAC5-208ENST00000588419 DPEP1P16444 411 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 TGFB2P61812 414 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 SLC39A6Q13433 755 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 DNAJC10Q8IXB1 793 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 LGR6Q9HBX8 967 aa18.56■□□□□ 0.56
HDAC5-208ENST00000588419 USP42Q9H9J4 1324 aaKnown RBP18.55■□□□□ 0.56
HDAC5-208ENST00000588419 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
HDAC5-208ENST00000588419 FCHSD2O94868 740 aa18.55■□□□□ 0.56
HDAC5-208ENST00000588419 KCPQ6ZWJ8 1503 aa18.54■□□□□ 0.56
HDAC5-208ENST00000588419 RNMTO43148 476 aaKnown RBP18.54■□□□□ 0.56
HDAC5-208ENST00000588419 FKBP8Q14318 412 aa18.54■□□□□ 0.56
HDAC5-208ENST00000588419 ARHGAP27Q6ZUM4 889 aa18.54■□□□□ 0.56
HDAC5-208ENST00000588419 U2SURPO15042 1029 aaKnown RBP18.53■□□□□ 0.56
HDAC5-208ENST00000588419 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
HDAC5-208ENST00000588419 SIPA1L3O60292 1781 aaPredicted RBP18.53■□□□□ 0.56
HDAC5-208ENST00000588419 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.56
HDAC5-208ENST00000588419 ZPR1O75312 459 aa18.51■□□□□ 0.55
HDAC5-208ENST00000588419 DDR1Q08345 913 aa18.51■□□□□ 0.55
HDAC5-208ENST00000588419 USPL1Q5W0Q7 1092 aa18.51■□□□□ 0.55
HDAC5-208ENST00000588419 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
HDAC5-208ENST00000588419 SBF1O95248 1867 aa18.5■□□□□ 0.55
HDAC5-208ENST00000588419 COL15A1P39059 1388 aa18.5■□□□□ 0.55
HDAC5-208ENST00000588419 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
HDAC5-208ENST00000588419 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-208ENST00000588419 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
HDAC5-208ENST00000588419 ZBTB1Q9Y2K1 713 aa18.49■□□□□ 0.55
HDAC5-208ENST00000588419 CACNA1SQ13698 1873 aa18.49■□□□□ 0.55
HDAC5-208ENST00000588419 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 588.8 ms