RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 GNPATO15228 680 aa20.83■□□□□ 0.93
PRKCSH-204ENST00000587290 KDRP35968 1356 aa20.83■□□□□ 0.92
PRKCSH-204ENST00000587290 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-204ENST00000587290 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
PRKCSH-204ENST00000587290 MYH14Q7Z406 1995 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-204ENST00000587290 VIRMAQ69YN4 1812 aaKnown RBP20.81■□□□□ 0.92
PRKCSH-204ENST00000587290 SSFA2P28290 1259 aa20.8■□□□□ 0.92
PRKCSH-204ENST00000587290 C4AP0C0L4 1744 aa20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 ZNF831Q5JPB2 1677 aa20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 SCN11AQ9UI33 1791 aa20.79■□□□□ 0.92
PRKCSH-204ENST00000587290 KIF7Q2M1P5 1343 aa20.78■□□□□ 0.92
PRKCSH-204ENST00000587290 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-204ENST00000587290 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
PRKCSH-204ENST00000587290 PLEKHG2Q9H7P9 1386 aa20.77■□□□□ 0.92
PRKCSH-204ENST00000587290 AMER1Q5JTC6 1135 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-204ENST00000587290 DCAF5Q96JK2 942 aa20.77■□□□□ 0.92
PRKCSH-204ENST00000587290 TJP1Q07157 1748 aa20.76■□□□□ 0.91
PRKCSH-204ENST00000587290 ERVV-2B6SEH9 535 aa20.76■□□□□ 0.91
PRKCSH-204ENST00000587290 N4BP2Q86UW6 1770 aaPredicted RBP20.76■□□□□ 0.91
PRKCSH-204ENST00000587290 KIAA1551Q9HCM1 1747 aa20.75■□□□□ 0.91
PRKCSH-204ENST00000587290 HMGB2P26583 209 aaKnown RBP20.75■□□□□ 0.91
PRKCSH-204ENST00000587290 CABP4P57796 275 aa20.75■□□□□ 0.91
PRKCSH-204ENST00000587290 CICQ96RK0 1608 aaPredicted RBP20.75■□□□□ 0.91
PRKCSH-204ENST00000587290 GRIN3BO60391 1043 aa20.74■□□□□ 0.91
PRKCSH-204ENST00000587290 HSP90AB1P08238 724 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-204ENST00000587290 IL13P35225 146 aa20.74■□□□□ 0.91
PRKCSH-204ENST00000587290 MTHFSP49914 203 aa20.74■□□□□ 0.91
PRKCSH-204ENST00000587290 KIF13BQ9NQT8 1826 aa20.74■□□□□ 0.91
PRKCSH-204ENST00000587290 PTCD1O75127 700 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-204ENST00000587290 MMP10P09238 476 aa20.73■□□□□ 0.91
PRKCSH-204ENST00000587290 AMOTQ4VCS5 1084 aa20.73■□□□□ 0.91
PRKCSH-204ENST00000587290 C1orf141Q5JVX7 400 aa20.73■□□□□ 0.91
PRKCSH-204ENST00000587290 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
PRKCSH-204ENST00000587290 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
PRKCSH-204ENST00000587290 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
PRKCSH-204ENST00000587290 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
PRKCSH-204ENST00000587290 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
PRKCSH-204ENST00000587290 SENP3-EIF4A1A0A087X0R7 540 aa20.7■□□□□ 0.9
PRKCSH-204ENST00000587290 HMOX1P09601 288 aa20.7■□□□□ 0.9
PRKCSH-204ENST00000587290 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.9
PRKCSH-204ENST00000587290 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
PRKCSH-204ENST00000587290 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-204ENST00000587290 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
PRKCSH-204ENST00000587290 CNTNAP4Q9C0A0 1308 aa20.69■□□□□ 0.9
PRKCSH-204ENST00000587290 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
PRKCSH-204ENST00000587290 BRCA1P38398 1863 aaKnown RBP20.67■□□□□ 0.9
PRKCSH-204ENST00000587290 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 GYS1P13807 737 aa20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 RC3H1Q5TC82 1133 aaKnown RBP20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 ZNF526Q8TF50 670 aaPredicted RBP20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 LGR6Q9HBX8 967 aa20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 ADAMTS7Q9UKP4 1686 aa20.66■□□□□ 0.9
PRKCSH-204ENST00000587290 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
PRKCSH-204ENST00000587290 ADCY9O60503 1353 aa20.65■□□□□ 0.9
PRKCSH-204ENST00000587290 RPS6KA4O75676 772 aa20.65■□□□□ 0.9
PRKCSH-204ENST00000587290 CRKLP46109 303 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-204ENST00000587290 SRP68Q9UHB9 627 aaKnown RBP20.65■□□□□ 0.9
PRKCSH-204ENST00000587290 MRC1P22897 1456 aa20.64■□□□□ 0.89
PRKCSH-204ENST00000587290 RFC4P35249 363 aa20.64■□□□□ 0.89
PRKCSH-204ENST00000587290 AKAP4Q5JQC9 854 aa20.63■□□□□ 0.89
PRKCSH-204ENST00000587290 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 A0A0G2JLW4 131 aa20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 ADRA2BP18089 450 aa20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 SLC39A6Q13433 755 aa20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 NLGN1Q8N2Q7 840 aa20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 KCPQ6ZWJ8 1503 aa20.62■□□□□ 0.89
PRKCSH-204ENST00000587290 DNAJC10Q8IXB1 793 aa20.61■□□□□ 0.89
PRKCSH-204ENST00000587290 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
PRKCSH-204ENST00000587290 RNMTO43148 476 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-204ENST00000587290 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-204ENST00000587290 INTS5Q6P9B9 1019 aaKnown RBP20.6■□□□□ 0.89
PRKCSH-204ENST00000587290 UBR2Q8IWV8 1755 aa20.59■□□□□ 0.89
PRKCSH-204ENST00000587290 DIAPH1O60610 1272 aaKnown RBP20.59■□□□□ 0.89
PRKCSH-204ENST00000587290 FKBP8Q14318 412 aa20.59■□□□□ 0.89
PRKCSH-204ENST00000587290 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
PRKCSH-204ENST00000587290 CEP350Q5VT06 3117 aa20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 DPEP1P16444 411 aa20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 DDR1Q08345 913 aa20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 GPBP1L1Q9HC44 474 aaPredicted RBP20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 PARP3Q9Y6F1 533 aa20.58■□□□□ 0.89
PRKCSH-204ENST00000587290 AFDNP55196 1824 aaKnown RBP20.57■□□□□ 0.88
PRKCSH-204ENST00000587290 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
PRKCSH-204ENST00000587290 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
PRKCSH-204ENST00000587290 U2SURPO15042 1029 aaKnown RBP20.55■□□□□ 0.88
PRKCSH-204ENST00000587290 TGFB2P61812 414 aa20.55■□□□□ 0.88
PRKCSH-204ENST00000587290 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
PRKCSH-204ENST00000587290 FCHSD2O94868 740 aa20.53■□□□□ 0.88
PRKCSH-204ENST00000587290 CYP19A1P11511 503 aaPredicted RBP20.53■□□□□ 0.88
PRKCSH-204ENST00000587290 KCNA3P22001 575 aa20.53■□□□□ 0.88
PRKCSH-204ENST00000587290 ZBTB1Q9Y2K1 713 aa20.53■□□□□ 0.88
PRKCSH-204ENST00000587290 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
PRKCSH-204ENST00000587290 USPL1Q5W0Q7 1092 aa20.52■□□□□ 0.88
PRKCSH-204ENST00000587290 COL15A1P39059 1388 aa20.51■□□□□ 0.87
PRKCSH-204ENST00000587290 CHRNA5P30532 468 aa20.51■□□□□ 0.87
PRKCSH-204ENST00000587290 ARHGAP27Q6ZUM4 889 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms