RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
SMAD4-203ENST00000585448 PTK7Q13308 1070 aa8.78□□□□□ -1
SMAD4-203ENST00000585448 MTFR1Q15390 333 aa8.78□□□□□ -1
SMAD4-203ENST00000585448 PBXIP1Q96AQ6 731 aa8.78□□□□□ -1
SMAD4-203ENST00000585448 FHDC1Q9C0D6 1143 aaPredicted RBP8.78□□□□□ -1
SMAD4-203ENST00000585448 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
SMAD4-203ENST00000585448 POTECB2RU33 542 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 BACH1O14867 736 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.77□□□□□ -1.01
SMAD4-203ENST00000585448 WDR44Q5JSH3 913 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 PKNOX2Q96KN3 472 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 NLRP3Q96P20 1036 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 POLMQ9NP87 494 aaPredicted RBP8.77□□□□□ -1.01
SMAD4-203ENST00000585448 PODXL2Q9NZ53 605 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 DNMT3LQ9UJW3 386 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L15C9J2P7 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L13C9JLJ4 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L12C9JPN9 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L11C9JVI0 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L21D6R901 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L18D6R9N7 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L22D6RA61 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L17D6RBQ6 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L19D6RCP7 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L20D6RJB6 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 RASA1P20936 1047 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 USP17L24Q0WX57 530 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 CRTC2Q53ET0 693 aaPredicted RBP8.76□□□□□ -1.01
SMAD4-203ENST00000585448 DIEXFQ68CQ4 756 aaKnown RBP8.76□□□□□ -1.01
SMAD4-203ENST00000585448 CCDC102BQ68D86 513 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 ZNF787Q6DD87 383 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
SMAD4-203ENST00000585448 RAB6BQ9NRW1 208 aa8.76□□□□□ -1.01
SMAD4-203ENST00000585448 MEN1O00255 615 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 ATG7O95352 703 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 SNRPBP14678 240 aaKnown RBP8.75□□□□□ -1.01
SMAD4-203ENST00000585448 SMTNP53814 917 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 CENPCQ03188 943 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 TPCN2Q8NHX9 752 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 ZNF358Q9NW07 568 aa8.75□□□□□ -1.01
SMAD4-203ENST00000585448 MAN1A2O60476 641 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 EPHA4P54764 986 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 PSME1Q06323 249 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 LYSMD3Q7Z3D4 306 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 NPAS3Q8IXF0 933 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 ARXQ96QS3 562 aa8.74□□□□□ -1.01
SMAD4-203ENST00000585448 SUPT5HO00267 1087 aaKnown RBP8.73□□□□□ -1.01
SMAD4-203ENST00000585448 SEC13P55735 322 aa8.73□□□□□ -1.01
SMAD4-203ENST00000585448 ANKMY2Q8IV38 441 aa8.73□□□□□ -1.01
SMAD4-203ENST00000585448 ZSCAN10Q96SZ4 725 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-203ENST00000585448 A6NJY4 79 aa8.72□□□□□ -1.01
SMAD4-203ENST00000585448 CDK2AP1O14519 115 aa8.72□□□□□ -1.01
SMAD4-203ENST00000585448 RFX1P22670 979 aa8.72□□□□□ -1.01
SMAD4-203ENST00000585448 IQSEC3Q9UPP2 1182 aaPredicted RBP8.72□□□□□ -1.01
SMAD4-203ENST00000585448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 STAU1O95793 577 aaKnown RBP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 FOXK2Q01167 660 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 TLR1Q15399 786 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 SLC27A3Q5K4L6 730 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 ZNF295-AS1Q8N0V1 137 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 RHBDD1Q8TEB9 315 aa8.71□□□□□ -1.02
SMAD4-203ENST00000585448 ZNF594Q96JF6 807 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 SCHIP1Q9P0W5 487 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.02
SMAD4-203ENST00000585448 POTEAQ6S8J7 498 aa8.7□□□□□ -1.02
SMAD4-203ENST00000585448 SLC35F4A4IF30 521 aa8.69□□□□□ -1.02
SMAD4-203ENST00000585448 DPYDQ12882 1025 aa8.69□□□□□ -1.02
SMAD4-203ENST00000585448 NBPF10Q6P3W6 841 aaKnown RBP8.69□□□□□ -1.02
SMAD4-203ENST00000585448 TAS1R3Q7RTX0 852 aa8.69□□□□□ -1.02
SMAD4-203ENST00000585448 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
SMAD4-203ENST00000585448 SENP3-EIF4A1A0A087X0R7 540 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 FIGNL2A6NMB9 653 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 NEFLP07196 543 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
SMAD4-203ENST00000585448 PTSQ03393 145 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 SWI5Q1ZZU3 235 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
SMAD4-203ENST00000585448 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
SMAD4-203ENST00000585448 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-203ENST00000585448 GNASQ5JWF2 1037 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 PRICKLE2Q7Z3G6 844 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 STAG2Q8N3U4 1231 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 FAM200AQ8TCP9 573 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 NXF1Q9UBU9 619 aaKnown RBP8.67□□□□□ -1.02
SMAD4-203ENST00000585448 SERTAD1Q9UHV2 236 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 DYRK1BQ9Y463 629 aa8.67□□□□□ -1.02
SMAD4-203ENST00000585448 SOBPA7XYQ1 873 aa8.66□□□□□ -1.02
SMAD4-203ENST00000585448 SFI1A8K8P3 1242 aa8.66□□□□□ -1.02
SMAD4-203ENST00000585448 HIRAP54198 1017 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-203ENST00000585448 TMEM214Q6NUQ4 689 aaKnown RBP8.66□□□□□ -1.02
SMAD4-203ENST00000585448 TEAD4Q15561 434 aa8.65□□□□□ -1.02
SMAD4-203ENST00000585448 C4orf17Q53FE4 359 aa8.65□□□□□ -1.02
SMAD4-203ENST00000585448 TSEN2Q8NCE0 465 aaKnown RBP8.65□□□□□ -1.02
SMAD4-203ENST00000585448 C1orf216Q8TAB5 229 aa8.65□□□□□ -1.02
SMAD4-203ENST00000585448 GMCL1Q96IK5 515 aa8.65□□□□□ -1.02
SMAD4-203ENST00000585448 NIFKQ9BYG3 293 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 248.3 ms