RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 KNSTRNQ9Y448 316 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CICQ96RK0 1608 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-229ENST00000583697 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 GRIN3BO60391 1043 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AMOTQ4VCS5 1084 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 PLEKHO1Q53GL0 409 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 C1orf141Q5JVX7 400 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ZNF530Q6P9A1 599 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 DCAF5Q96JK2 942 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
CDK5RAP3-229ENST00000583697 TJP1Q07157 1748 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ATG3Q9NT62 314 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CD2APQ9Y5K6 639 aa11.87□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIF13BQ9NQT8 1826 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 ITPK1Q13572 414 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AMIGO3Q86WK7 504 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
CDK5RAP3-229ENST00000583697 GIGYF1O75420 1035 aaPredicted RBP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 YBX3P16989 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CABP4P57796 275 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 AEBP1Q8IUX7 1158 aa11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
CDK5RAP3-229ENST00000583697 KIAA1551Q9HCM1 1747 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 MTHFSP49914 203 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
CDK5RAP3-229ENST00000583697 MRC1P22897 1456 aa11.83□□□□□ -0.52
CDK5RAP3-229ENST00000583697 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 SENP3-EIF4A1A0A087X0R7 540 aa11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 AMER1Q5JTC6 1135 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADAMTS7Q9UKP4 1686 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 MMP10P09238 476 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADRA2BP18089 450 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 IL13P35225 146 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 TRAPPC3LQ5T215 181 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 WWC3Q9ULE0 1092 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
CDK5RAP3-229ENST00000583697 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RFC4P35249 363 aa11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-229ENST00000583697 UBR2Q8IWV8 1755 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 NLGN1Q8N2Q7 840 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 SLC4A9Q96Q91 983 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 ADCY9O60503 1353 aa11.79□□□□□ -0.52
CDK5RAP3-229ENST00000583697 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 HMOX1P09601 288 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 CCDC87Q9NVE4 849 aa11.78□□□□□ -0.52
CDK5RAP3-229ENST00000583697 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.52
CDK5RAP3-229ENST00000583697 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.52
CDK5RAP3-229ENST00000583697 DIAPH1O60610 1272 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ARHGEF1Q92888 912 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GYS1P13807 737 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TGFB2P61812 414 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CNGB1Q14028 1251 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 NPC1L1Q9UHC9 1359 aa11.76□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 BCS1LQ9Y276 419 aa11.75□□□□□ -0.53
CDK5RAP3-229ENST00000583697 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 COL15A1P39059 1388 aa11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
CDK5RAP3-229ENST00000583697 PER1O15534 1290 aaPredicted RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 RNMTO43148 476 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 MTHFSDQ2M296 383 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
CDK5RAP3-229ENST00000583697 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 A0A0G2JLW4 131 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZPR1O75312 459 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 FCHSD2O94868 740 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 TEFQ10587 303 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 CFAP53Q96M91 514 aa11.71□□□□□ -0.53
CDK5RAP3-229ENST00000583697 DPEP1P16444 411 aa11.7□□□□□ -0.54
CDK5RAP3-229ENST00000583697 FKBP8Q14318 412 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms