RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 LINC00116Q8NCU8 138 aa19.15■□□□□ 0.66
ERBB2-213ENST00000582818 PLEKHO1Q53GL0 409 aaPredicted RBP19.14■□□□□ 0.65
ERBB2-213ENST00000582818 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
ERBB2-213ENST00000582818 ADRA2BP18089 450 aa19.13■□□□□ 0.65
ERBB2-213ENST00000582818 RC3H1Q5TC82 1133 aaKnown RBP19.13■□□□□ 0.65
ERBB2-213ENST00000582818 AMIGO3Q86WK7 504 aa19.13■□□□□ 0.65
ERBB2-213ENST00000582818 PANK3Q9H999 370 aa19.13■□□□□ 0.65
ERBB2-213ENST00000582818 KDRP35968 1356 aa19.13■□□□□ 0.65
ERBB2-213ENST00000582818 KIF13BQ9NQT8 1826 aa19.12■□□□□ 0.65
ERBB2-213ENST00000582818 GNPATO15228 680 aa19.12■□□□□ 0.65
ERBB2-213ENST00000582818 PHF14O94880 888 aa19.12■□□□□ 0.65
ERBB2-213ENST00000582818 ITPK1Q13572 414 aa19.12■□□□□ 0.65
ERBB2-213ENST00000582818 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
ERBB2-213ENST00000582818 SENP3-EIF4A1A0A087X0R7 540 aa19.11■□□□□ 0.65
ERBB2-213ENST00000582818 TNNT2P45379 298 aaPredicted RBP19.11■□□□□ 0.65
ERBB2-213ENST00000582818 NLGN1Q8N2Q7 840 aa19.1■□□□□ 0.65
ERBB2-213ENST00000582818 RTCBQ9Y3I0 505 aaKnown RBP19.1■□□□□ 0.65
ERBB2-213ENST00000582818 COL5A3P25940 1745 aaPredicted RBP19.1■□□□□ 0.65
ERBB2-213ENST00000582818 CEP350Q5VT06 3117 aa19.1■□□□□ 0.65
ERBB2-213ENST00000582818 ADCY9O60503 1353 aa19.09■□□□□ 0.65
ERBB2-213ENST00000582818 CNTNAP4Q9C0A0 1308 aa19.09■□□□□ 0.65
ERBB2-213ENST00000582818 TRAPPC3LQ5T215 181 aa19.09■□□□□ 0.65
ERBB2-213ENST00000582818 MORC1Q86VD1 984 aa19.08■□□□□ 0.64
ERBB2-213ENST00000582818 ATP10DQ9P241 1426 aa19.08■□□□□ 0.64
ERBB2-213ENST00000582818 TGFB2P61812 414 aa19.07■□□□□ 0.64
ERBB2-213ENST00000582818 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
ERBB2-213ENST00000582818 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
ERBB2-213ENST00000582818 MYH14Q7Z406 1995 aaKnown RBP19.06■□□□□ 0.64
ERBB2-213ENST00000582818 CABP4P57796 275 aa19.06■□□□□ 0.64
ERBB2-213ENST00000582818 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
ERBB2-213ENST00000582818 CICQ96RK0 1608 aaPredicted RBP19.06■□□□□ 0.64
ERBB2-213ENST00000582818 RPS6KA4O75676 772 aa19.05■□□□□ 0.64
ERBB2-213ENST00000582818 MMP10P09238 476 aa19.05■□□□□ 0.64
ERBB2-213ENST00000582818 MTHFSP49914 203 aa19.05■□□□□ 0.64
ERBB2-213ENST00000582818 KDM6AO15550 1401 aaPredicted RBP19.05■□□□□ 0.64
ERBB2-213ENST00000582818 SCN11AQ9UI33 1791 aa19.04■□□□□ 0.64
ERBB2-213ENST00000582818 SLC4A9Q96Q91 983 aa19.04■□□□□ 0.64
ERBB2-213ENST00000582818 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
ERBB2-213ENST00000582818 GPBP1L1Q9HC44 474 aaPredicted RBP19.04■□□□□ 0.64
ERBB2-213ENST00000582818 RFC4P35249 363 aa19.02■□□□□ 0.64
ERBB2-213ENST00000582818 SMIM5Q71RC9 77 aa19.02■□□□□ 0.64
ERBB2-213ENST00000582818 ARHGEF1Q92888 912 aaKnown RBP19.02■□□□□ 0.64
ERBB2-213ENST00000582818 C10orf71Q711Q0 1435 aa19.01■□□□□ 0.63
ERBB2-213ENST00000582818 C4AP0C0L4 1744 aa19.01■□□□□ 0.63
ERBB2-213ENST00000582818 KIAA1551Q9HCM1 1747 aa19.01■□□□□ 0.63
ERBB2-213ENST00000582818 IL13P35225 146 aa19.01■□□□□ 0.63
ERBB2-213ENST00000582818 PXDNLA1KZ92 1463 aa19.01■□□□□ 0.63
ERBB2-213ENST00000582818 GYS1P13807 737 aa19■□□□□ 0.63
ERBB2-213ENST00000582818 SULT6B1Q6IMI4 303 aa19■□□□□ 0.63
ERBB2-213ENST00000582818 CCDC87Q9NVE4 849 aa19■□□□□ 0.63
ERBB2-213ENST00000582818 BRCA1P38398 1863 aaKnown RBP19■□□□□ 0.63
ERBB2-213ENST00000582818 AKAP4Q5JQC9 854 aa18.99■□□□□ 0.63
ERBB2-213ENST00000582818 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
ERBB2-213ENST00000582818 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
ERBB2-213ENST00000582818 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
ERBB2-213ENST00000582818 PARP3Q9Y6F1 533 aa18.98■□□□□ 0.63
ERBB2-213ENST00000582818 N4BP2Q86UW6 1770 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-213ENST00000582818 ARFGEF1Q9Y6D6 1849 aa18.97■□□□□ 0.63
ERBB2-213ENST00000582818 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
ERBB2-213ENST00000582818 VIRMAQ69YN4 1812 aaKnown RBP18.97■□□□□ 0.63
ERBB2-213ENST00000582818 PTCD1O75127 700 aaKnown RBP18.96■□□□□ 0.63
ERBB2-213ENST00000582818 CRKLP46109 303 aaKnown RBP18.96■□□□□ 0.63
ERBB2-213ENST00000582818 TJP1Q07157 1748 aa18.95■□□□□ 0.62
ERBB2-213ENST00000582818 MRC1P22897 1456 aa18.95■□□□□ 0.62
ERBB2-213ENST00000582818 SLC52A2Q9HAB3 445 aa18.94■□□□□ 0.62
ERBB2-213ENST00000582818 USP42Q9H9J4 1324 aaKnown RBP18.94■□□□□ 0.62
ERBB2-213ENST00000582818 ADAMTS7Q9UKP4 1686 aa18.93■□□□□ 0.62
ERBB2-213ENST00000582818 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
ERBB2-213ENST00000582818 HSPA6P17066 643 aa18.92■□□□□ 0.62
ERBB2-213ENST00000582818 VSIG10Q8N0Z9 540 aa18.92■□□□□ 0.62
ERBB2-213ENST00000582818 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
ERBB2-213ENST00000582818 NPC1L1Q9UHC9 1359 aa18.92■□□□□ 0.62
ERBB2-213ENST00000582818 DPEP1P16444 411 aa18.91■□□□□ 0.62
ERBB2-213ENST00000582818 INTS5Q6P9B9 1019 aaKnown RBP18.91■□□□□ 0.62
ERBB2-213ENST00000582818 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
ERBB2-213ENST00000582818 KIF3CO14782 793 aa18.89■□□□□ 0.61
ERBB2-213ENST00000582818 RNMTO43148 476 aaKnown RBP18.89■□□□□ 0.61
ERBB2-213ENST00000582818 ZPR1O75312 459 aa18.89■□□□□ 0.61
ERBB2-213ENST00000582818 FCHSD2O94868 740 aa18.89■□□□□ 0.61
ERBB2-213ENST00000582818 KCNA3P22001 575 aa18.89■□□□□ 0.61
ERBB2-213ENST00000582818 ZNF526Q8TF50 670 aaPredicted RBP18.89■□□□□ 0.61
ERBB2-213ENST00000582818 WWC3Q9ULE0 1092 aa18.89■□□□□ 0.61
ERBB2-213ENST00000582818 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
ERBB2-213ENST00000582818 TM4SF1P30408 202 aa18.88■□□□□ 0.61
ERBB2-213ENST00000582818 FKBP8Q14318 412 aa18.88■□□□□ 0.61
ERBB2-213ENST00000582818 ARHGAP27Q6ZUM4 889 aa18.88■□□□□ 0.61
ERBB2-213ENST00000582818 ZNF316A6NFI3 1004 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-213ENST00000582818 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-213ENST00000582818 SOS1Q07889 1333 aaPredicted RBP18.87■□□□□ 0.61
ERBB2-213ENST00000582818 UBR2Q8IWV8 1755 aa18.87■□□□□ 0.61
ERBB2-213ENST00000582818 DDR1Q08345 913 aa18.86■□□□□ 0.61
ERBB2-213ENST00000582818 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
ERBB2-213ENST00000582818 DNAJC10Q8IXB1 793 aa18.86■□□□□ 0.61
ERBB2-213ENST00000582818 LGR6Q9HBX8 967 aa18.86■□□□□ 0.61
ERBB2-213ENST00000582818 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
ERBB2-213ENST00000582818 KCPQ6ZWJ8 1503 aa18.85■□□□□ 0.61
ERBB2-213ENST00000582818 POLRMTO00411 1230 aaKnown RBP18.85■□□□□ 0.61
ERBB2-213ENST00000582818 TOMM70O94826 608 aa18.85■□□□□ 0.61
ERBB2-213ENST00000582818 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
ERBB2-213ENST00000582818 SBF1O95248 1867 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms