RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
TOP2A-202ENST00000577541 SEPT12Q8IYM1 358 aa7.55□□□□□ -1.2
TOP2A-202ENST00000577541 WASLO00401 505 aaPredicted RBP7.54□□□□□ -1.2
TOP2A-202ENST00000577541 EPS8L1Q8TE68 723 aa7.54□□□□□ -1.2
TOP2A-202ENST00000577541 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
TOP2A-202ENST00000577541 TRIM66O15016 1216 aa7.52□□□□□ -1.21
TOP2A-202ENST00000577541 DYRK3O43781 588 aa7.52□□□□□ -1.21
TOP2A-202ENST00000577541 RNF135Q8IUD6 432 aa7.52□□□□□ -1.21
TOP2A-202ENST00000577541 ATXN7L1Q9ULK2 861 aaPredicted RBP7.52□□□□□ -1.21
TOP2A-202ENST00000577541 CTBSQ01459 385 aa7.51□□□□□ -1.21
TOP2A-202ENST00000577541 CLN3Q13286 438 aa7.51□□□□□ -1.21
TOP2A-202ENST00000577541 LBRQ14739 615 aaKnown RBP7.51□□□□□ -1.21
TOP2A-202ENST00000577541 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
TOP2A-202ENST00000577541 SPATA31C1P0DKV0 1188 aa7.5□□□□□ -1.21
TOP2A-202ENST00000577541 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
TOP2A-202ENST00000577541 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
TOP2A-202ENST00000577541 ARAFP10398 606 aa7.49□□□□□ -1.21
TOP2A-202ENST00000577541 FGFR3P22607 806 aa7.49□□□□□ -1.21
TOP2A-202ENST00000577541 CLK2P49760 499 aaKnown RBP7.49□□□□□ -1.21
TOP2A-202ENST00000577541 CHSY3Q70JA7 882 aa7.49□□□□□ -1.21
TOP2A-202ENST00000577541 A0A1B0GTH6 734 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 NEURL1BA8MQ27 555 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 LRP8Q14114 963 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 TRIM11Q96F44 468 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 ABHD17AQ96GS6 310 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 PLVAPQ9BX97 442 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 POLR3EQ9NVU0 708 aa7.48□□□□□ -1.21
TOP2A-202ENST00000577541 GIGYF1O75420 1035 aaPredicted RBP7.47□□□□□ -1.21
TOP2A-202ENST00000577541 CSB-PGBD3P0DP91 1061 aa7.47□□□□□ -1.21
TOP2A-202ENST00000577541 PLCB2Q00722 1185 aa7.47□□□□□ -1.21
TOP2A-202ENST00000577541 PGBD3Q8N328 593 aa7.47□□□□□ -1.21
TOP2A-202ENST00000577541 NDFIP2Q9NV92 336 aa7.47□□□□□ -1.21
TOP2A-202ENST00000577541 BNIP3LO60238 219 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 PHKA2P46019 1235 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 SCTRP47872 440 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 ERVK-9P63128 1117 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 PNMA1Q8ND90 353 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 ZC3H15Q8WU90 426 aaKnown RBP7.46□□□□□ -1.22
TOP2A-202ENST00000577541 HCN2Q9UL51 889 aa7.46□□□□□ -1.22
TOP2A-202ENST00000577541 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
TOP2A-202ENST00000577541 COBLO75128 1261 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 EFHC2Q5JST6 749 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 LCE1DQ5T752 114 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 RUBCNLQ9H714 662 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 KLF15Q9UIH9 416 aa7.45□□□□□ -1.22
TOP2A-202ENST00000577541 CCDC125Q86Z20 511 aa7.44□□□□□ -1.22
TOP2A-202ENST00000577541 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
TOP2A-202ENST00000577541 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
TOP2A-202ENST00000577541 APBA3O96018 575 aa7.42□□□□□ -1.22
TOP2A-202ENST00000577541 SPDYE3A6NKU9 549 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 ADH6P28332 368 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 MSX1P28360 303 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 CENPCQ03188 943 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 PRRT3Q5FWE3 981 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 RSPH6AQ9H0K4 717 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 OSBPL3Q9H4L5 887 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 RAB6BQ9NRW1 208 aa7.41□□□□□ -1.22
TOP2A-202ENST00000577541 TRAK2O60296 914 aa7.4□□□□□ -1.22
TOP2A-202ENST00000577541 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
TOP2A-202ENST00000577541 IL2RAP01589 272 aa7.39□□□□□ -1.23
TOP2A-202ENST00000577541 MCTP1Q6DN14 999 aa7.39□□□□□ -1.23
TOP2A-202ENST00000577541 CNKSR1Q969H4 720 aa7.39□□□□□ -1.23
TOP2A-202ENST00000577541 ZSCAN10Q96SZ4 725 aaPredicted RBP7.39□□□□□ -1.23
TOP2A-202ENST00000577541 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
TOP2A-202ENST00000577541 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.231e-8■□□□□ 10.6
TOP2A-202ENST00000577541 GTF2E1P29083 439 aaPredicted RBP7.38□□□□□ -1.23
TOP2A-202ENST00000577541 TXKP42681 527 aa7.38□□□□□ -1.23
TOP2A-202ENST00000577541 GNASQ5JWF2 1037 aa7.38□□□□□ -1.23
TOP2A-202ENST00000577541 ESF1Q9H501 851 aaKnown RBP7.38□□□□□ -1.23
TOP2A-202ENST00000577541 HRH3Q9Y5N1 445 aa7.38□□□□□ -1.23
TOP2A-202ENST00000577541 PAX4O43316 350 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 C4orf17Q53FE4 359 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 RNF20Q5VTR2 975 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 FIGNL1Q6PIW4 674 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 CRISPLD1Q9H336 500 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 AVENQ9NQS1 362 aaPredicted RBP7.37□□□□□ -1.23
TOP2A-202ENST00000577541 DNAAF2Q9NVR5 837 aaKnown RBP7.37□□□□□ -1.23
TOP2A-202ENST00000577541 PCDHGC4Q9Y5F7 938 aa7.37□□□□□ -1.23
TOP2A-202ENST00000577541 GNRH1P01148 92 aa7.36□□□□□ -1.23
TOP2A-202ENST00000577541 PDE4DQ08499 809 aa7.36□□□□□ -1.23
TOP2A-202ENST00000577541 TMEM214Q6NUQ4 689 aaKnown RBP7.36□□□□□ -1.23
TOP2A-202ENST00000577541 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
TOP2A-202ENST00000577541 AK7Q96M32 723 aa7.36□□□□□ -1.23
TOP2A-202ENST00000577541 NACC1Q96RE7 527 aa7.36□□□□□ -1.23
TOP2A-202ENST00000577541 FHDC1Q9C0D6 1143 aaPredicted RBP7.36□□□□□ -1.23
TOP2A-202ENST00000577541 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
TOP2A-202ENST00000577541 ZCCHC2Q9C0B9 1178 aaKnown RBP7.35□□□□□ -1.23
TOP2A-202ENST00000577541 AP1G2O75843 785 aa7.34□□□□□ -1.23
TOP2A-202ENST00000577541 HAP1P54257 671 aaPredicted RBP7.34□□□□□ -1.23
TOP2A-202ENST00000577541 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
TOP2A-202ENST00000577541 FAM182BQ5T319 152 aa7.33□□□□□ -1.24
TOP2A-202ENST00000577541 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
TOP2A-202ENST00000577541 COL17A1Q9UMD9 1497 aaPredicted RBP7.32□□□□□ -1.24
TOP2A-202ENST00000577541 COL9A3Q14050 684 aaPredicted RBP7.32□□□□□ -1.24
TOP2A-202ENST00000577541 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.32□□□□□ -1.24
TOP2A-202ENST00000577541 PCDHB11Q9Y5F2 797 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms