RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
LITAF-219ENST00000576334 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
LITAF-219ENST00000576334 AMOTQ4VCS5 1084 aa16.12■□□□□ 0.17
LITAF-219ENST00000576334 AK7Q96M32 723 aa16.12■□□□□ 0.17
LITAF-219ENST00000576334 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
LITAF-219ENST00000576334 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
LITAF-219ENST00000576334 CABP4P57796 275 aa16.11■□□□□ 0.17
LITAF-219ENST00000576334 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
LITAF-219ENST00000576334 LGR6Q9HBX8 967 aa16.11■□□□□ 0.17
LITAF-219ENST00000576334 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
LITAF-219ENST00000576334 POLD1P28340 1107 aa16.1■□□□□ 0.17
LITAF-219ENST00000576334 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
LITAF-219ENST00000576334 NLGN2Q8NFZ4 835 aa16.1■□□□□ 0.17
LITAF-219ENST00000576334 PLEKHG2Q9H7P9 1386 aa16.1■□□□□ 0.17
LITAF-219ENST00000576334 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
LITAF-219ENST00000576334 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
LITAF-219ENST00000576334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.09■□□□□ 0.17
LITAF-219ENST00000576334 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
LITAF-219ENST00000576334 MTHFSDQ2M296 383 aaKnown RBP16.09■□□□□ 0.17
LITAF-219ENST00000576334 U2SURPO15042 1029 aaKnown RBP16.08■□□□□ 0.16
LITAF-219ENST00000576334 GNPATO15228 680 aa16.08■□□□□ 0.16
LITAF-219ENST00000576334 PTCD1O75127 700 aaKnown RBP16.08■□□□□ 0.16
LITAF-219ENST00000576334 MYH14Q7Z406 1995 aaKnown RBP16.06■□□□□ 0.16
LITAF-219ENST00000576334 COL5A3P25940 1745 aaPredicted RBP16.06■□□□□ 0.16
LITAF-219ENST00000576334 YY1P25490 414 aa16.06■□□□□ 0.16
LITAF-219ENST00000576334 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
LITAF-219ENST00000576334 MAP3K5Q99683 1374 aa16.05■□□□□ 0.16
LITAF-219ENST00000576334 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
LITAF-219ENST00000576334 RNMTO43148 476 aaKnown RBP16.04■□□□□ 0.16
LITAF-219ENST00000576334 PPP2R1AP30153 589 aa16.04■□□□□ 0.16
LITAF-219ENST00000576334 SLC39A6Q13433 755 aa16.04■□□□□ 0.16
LITAF-219ENST00000576334 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
LITAF-219ENST00000576334 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
LITAF-219ENST00000576334 TJP1Q07157 1748 aa16.03■□□□□ 0.16
LITAF-219ENST00000576334 SSFA2P28290 1259 aa16.03■□□□□ 0.16
LITAF-219ENST00000576334 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
LITAF-219ENST00000576334 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.16
LITAF-219ENST00000576334 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.16
LITAF-219ENST00000576334 GPR162Q16538 588 aa16.01■□□□□ 0.15
LITAF-219ENST00000576334 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
LITAF-219ENST00000576334 WWC3Q9ULE0 1092 aa16.01■□□□□ 0.15
LITAF-219ENST00000576334 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
LITAF-219ENST00000576334 MRC1P22897 1456 aa16■□□□□ 0.15
LITAF-219ENST00000576334 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
LITAF-219ENST00000576334 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.15
LITAF-219ENST00000576334 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
LITAF-219ENST00000576334 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 DNAJC10Q8IXB1 793 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 RSPH6AQ9H0K4 717 aa15.99■□□□□ 0.15
LITAF-219ENST00000576334 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
LITAF-219ENST00000576334 RC3H1Q5TC82 1133 aaKnown RBP15.98■□□□□ 0.15
LITAF-219ENST00000576334 SRP68Q9UHB9 627 aaKnown RBP15.98■□□□□ 0.15
LITAF-219ENST00000576334 KCPQ6ZWJ8 1503 aa15.98■□□□□ 0.15
LITAF-219ENST00000576334 HMGB2P26583 209 aaKnown RBP15.97■□□□□ 0.15
LITAF-219ENST00000576334 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
LITAF-219ENST00000576334 CFAP53Q96M91 514 aa15.97■□□□□ 0.15
LITAF-219ENST00000576334 CHD4Q14839 1912 aa15.96■□□□□ 0.15
LITAF-219ENST00000576334 MMP10P09238 476 aa15.96■□□□□ 0.15
LITAF-219ENST00000576334 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
LITAF-219ENST00000576334 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
LITAF-219ENST00000576334 CICQ96RK0 1608 aaPredicted RBP15.95■□□□□ 0.14
LITAF-219ENST00000576334 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
LITAF-219ENST00000576334 GYS1P13807 737 aa15.95■□□□□ 0.14
LITAF-219ENST00000576334 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
LITAF-219ENST00000576334 RFC4P35249 363 aa15.94■□□□□ 0.14
LITAF-219ENST00000576334 GAS2L2Q8NHY3 880 aa15.94■□□□□ 0.14
LITAF-219ENST00000576334 CD2APQ9Y5K6 639 aa15.94■□□□□ 0.14
LITAF-219ENST00000576334 UBR2Q8IWV8 1755 aa15.94■□□□□ 0.14
LITAF-219ENST00000576334 KCNQ3O43525 872 aa15.93■□□□□ 0.14
LITAF-219ENST00000576334 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
LITAF-219ENST00000576334 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
LITAF-219ENST00000576334 DCTN1Q14203 1278 aa15.92■□□□□ 0.14
LITAF-219ENST00000576334 FKBP8Q14318 412 aa15.92■□□□□ 0.14
LITAF-219ENST00000576334 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
LITAF-219ENST00000576334 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
LITAF-219ENST00000576334 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
LITAF-219ENST00000576334 N4BP2Q86UW6 1770 aaPredicted RBP15.91■□□□□ 0.14
LITAF-219ENST00000576334 ADRA2BP18089 450 aa15.91■□□□□ 0.14
LITAF-219ENST00000576334 TEFQ10587 303 aa15.91■□□□□ 0.14
LITAF-219ENST00000576334 MCM10Q7L590 875 aa15.91■□□□□ 0.14
LITAF-219ENST00000576334 ZNF784Q8NCA9 323 aaPredicted RBP15.91■□□□□ 0.14
LITAF-219ENST00000576334 ZNF496Q96IT1 587 aaPredicted RBP15.91■□□□□ 0.14
LITAF-219ENST00000576334 KIAA1551Q9HCM1 1747 aa15.91■□□□□ 0.14
LITAF-219ENST00000576334 NLGN1Q8N2Q7 840 aa15.9■□□□□ 0.14
LITAF-219ENST00000576334 SOS1Q07889 1333 aaPredicted RBP15.9■□□□□ 0.14
LITAF-219ENST00000576334 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
LITAF-219ENST00000576334 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
LITAF-219ENST00000576334 FCHSD2O94868 740 aa15.89■□□□□ 0.13
LITAF-219ENST00000576334 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
LITAF-219ENST00000576334 USPL1Q5W0Q7 1092 aa15.89■□□□□ 0.13
LITAF-219ENST00000576334 ZNF790Q6PG37 636 aa15.89■□□□□ 0.13
LITAF-219ENST00000576334 KIF13BQ9NQT8 1826 aa15.89■□□□□ 0.13
LITAF-219ENST00000576334 PRAMEF22A3QJZ6 481 aa15.88■□□□□ 0.13
LITAF-219ENST00000576334 DDR1Q08345 913 aa15.88■□□□□ 0.13
LITAF-219ENST00000576334 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
LITAF-219ENST00000576334 PXDNLA1KZ92 1463 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms