RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
TRIM25-209ENST00000574997 RTCBQ9Y3I0 505 aaKnown RBP8.88□□□□□ -0.99
TRIM25-209ENST00000574997 ADCY9O60503 1353 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 EIF4A2Q14240 407 aaKnown RBP8.87□□□□□ -0.99
TRIM25-209ENST00000574997 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 ATG3Q9NT62 314 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 ASAP1Q9ULH1 1129 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 ZNF831Q5JPB2 1677 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 UBR3Q6ZT12 1888 aa8.87□□□□□ -0.99
TRIM25-209ENST00000574997 IGSF1Q8N6C5 1336 aa8.86□□□□□ -0.99
TRIM25-209ENST00000574997 GNPATO15228 680 aa8.86□□□□□ -0.99
TRIM25-209ENST00000574997 PHF14O94880 888 aa8.86□□□□□ -0.99
TRIM25-209ENST00000574997 LINC00116Q8NCU8 138 aa8.86□□□□□ -0.99
TRIM25-209ENST00000574997 CNTNAP4Q9C0A0 1308 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 RPS6KA4O75676 772 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 RFC4P35249 363 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 MTHFSP49914 203 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 CABP4P57796 275 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 C1orf141Q5JVX7 400 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 ZNF526Q8TF50 670 aaPredicted RBP8.85□□□□□ -0.99
TRIM25-209ENST00000574997 PANK3Q9H999 370 aa8.85□□□□□ -0.99
TRIM25-209ENST00000574997 HSPA6P17066 643 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 ITPK1Q13572 414 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 MORC1Q86VD1 984 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 CCDC87Q9NVE4 849 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 KNSTRNQ9Y448 316 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 TOGARAM1Q9Y4F4 1720 aa8.84□□□□□ -0.99
TRIM25-209ENST00000574997 MMP10P09238 476 aa8.83□□□□□ -1
TRIM25-209ENST00000574997 TNNT2P45379 298 aaPredicted RBP8.83□□□□□ -1
TRIM25-209ENST00000574997 ARHGEF1Q92888 912 aaKnown RBP8.83□□□□□ -1
TRIM25-209ENST00000574997 POLR3GLQ9BT43 218 aa8.83□□□□□ -1
TRIM25-209ENST00000574997 RBM42Q9BTD8 480 aaKnown RBP8.83□□□□□ -1
TRIM25-209ENST00000574997 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
TRIM25-209ENST00000574997 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
TRIM25-209ENST00000574997 AMIGO3Q86WK7 504 aa8.82□□□□□ -1
TRIM25-209ENST00000574997 WWC3Q9ULE0 1092 aa8.82□□□□□ -1
TRIM25-209ENST00000574997 KDRP35968 1356 aa8.82□□□□□ -1
TRIM25-209ENST00000574997 KIF13BQ9NQT8 1826 aa8.82□□□□□ -1
TRIM25-209ENST00000574997 CICQ96RK0 1608 aaPredicted RBP8.81□□□□□ -1
TRIM25-209ENST00000574997 GYS1P13807 737 aa8.81□□□□□ -1
TRIM25-209ENST00000574997 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
TRIM25-209ENST00000574997 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
TRIM25-209ENST00000574997 PCGF6Q9BYE7 350 aa8.81□□□□□ -1
TRIM25-209ENST00000574997 TOMM70O94826 608 aa8.8□□□□□ -1
TRIM25-209ENST00000574997 HSPA5P11021 654 aaKnown RBP8.8□□□□□ -1
TRIM25-209ENST00000574997 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
TRIM25-209ENST00000574997 PPP4R3CPQ6ZMV5 832 aa8.8□□□□□ -1
TRIM25-209ENST00000574997 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
TRIM25-209ENST00000574997 PIM2Q9P1W9 311 aa8.8□□□□□ -1
TRIM25-209ENST00000574997 IL13P35225 146 aa8.79□□□□□ -1
TRIM25-209ENST00000574997 APLP1P51693 650 aa8.79□□□□□ -1
TRIM25-209ENST00000574997 ARHGAP27Q6ZUM4 889 aa8.79□□□□□ -1
TRIM25-209ENST00000574997 SLC4A9Q96Q91 983 aa8.79□□□□□ -1
TRIM25-209ENST00000574997 BCS1LQ9Y276 419 aa8.79□□□□□ -1
TRIM25-209ENST00000574997 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
TRIM25-209ENST00000574997 A0A0G2JLW4 131 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 KIF3CO14782 793 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 PTCD1O75127 700 aaKnown RBP8.78□□□□□ -1
TRIM25-209ENST00000574997 ZPR1O75312 459 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 FCHSD2O94868 740 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 CRKLP46109 303 aaKnown RBP8.78□□□□□ -1
TRIM25-209ENST00000574997 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 C10orf71Q711Q0 1435 aa8.78□□□□□ -1
TRIM25-209ENST00000574997 PXDNLA1KZ92 1463 aa8.77□□□□□ -1
TRIM25-209ENST00000574997 C4AP0C0L4 1744 aa8.77□□□□□ -1
TRIM25-209ENST00000574997 DPEP1P16444 411 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 TM4SF1P30408 202 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 DALRD3Q5D0E6 543 aaKnown RBP8.77□□□□□ -1.01
TRIM25-209ENST00000574997 SMIM5Q71RC9 77 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 TEX13AQ9BXU3 409 aaPredicted RBP8.77□□□□□ -1.01
TRIM25-209ENST00000574997 SLC52A2Q9HAB3 445 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 KDM6AO15550 1401 aaPredicted RBP8.77□□□□□ -1.01
TRIM25-209ENST00000574997 KDM2BQ8NHM5 1336 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
TRIM25-209ENST00000574997 ZC3H4Q9UPT8 1303 aaKnown RBP8.77□□□□□ -1.01
TRIM25-209ENST00000574997 KIAA1551Q9HCM1 1747 aa8.77□□□□□ -1.01
TRIM25-209ENST00000574997 DIAPH1O60610 1272 aaKnown RBP8.76□□□□□ -1.01
TRIM25-209ENST00000574997 KCNA3P22001 575 aa8.76□□□□□ -1.01
TRIM25-209ENST00000574997 AMER1Q5JTC6 1135 aaPredicted RBP8.76□□□□□ -1.01
TRIM25-209ENST00000574997 INTS5Q6P9B9 1019 aaKnown RBP8.76□□□□□ -1.01
TRIM25-209ENST00000574997 RBM46Q8TBY0 533 aaKnown RBP8.76□□□□□ -1.01
TRIM25-209ENST00000574997 CCER1Q8TC90 406 aaPredicted RBP8.76□□□□□ -1.01
TRIM25-209ENST00000574997 NARFQ9UHQ1 456 aa8.76□□□□□ -1.01
TRIM25-209ENST00000574997 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
TRIM25-209ENST00000574997 WDR90Q96KV7 1748 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 A0A087WZG4 1122 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 STARD3NLO95772 234 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 FSTL1Q12841 308 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 AEBP1Q8IUX7 1158 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 C16orf71Q8IYS4 520 aaPredicted RBP8.75□□□□□ -1.01
TRIM25-209ENST00000574997 MYH14Q7Z406 1995 aaKnown RBP8.75□□□□□ -1.01
TRIM25-209ENST00000574997 ARFGEF1Q9Y6D6 1849 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 PCNTO95613 3336 aa8.75□□□□□ -1.01
TRIM25-209ENST00000574997 N4BP2Q86UW6 1770 aaPredicted RBP8.74□□□□□ -1.01
TRIM25-209ENST00000574997 POLRMTO00411 1230 aaKnown RBP8.74□□□□□ -1.01
TRIM25-209ENST00000574997 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
TRIM25-209ENST00000574997 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
TRIM25-209ENST00000574997 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
TRIM25-209ENST00000574997 FKBP8Q14318 412 aa8.74□□□□□ -1.01
TRIM25-209ENST00000574997 BRCA1P38398 1863 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms