RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 ATG3Q9NT62 314 aa16.66■□□□□ 0.26
TRIM25-207ENST00000573108 GNPATO15228 680 aa16.65■□□□□ 0.26
TRIM25-207ENST00000573108 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
TRIM25-207ENST00000573108 ADCY9O60503 1353 aa16.64■□□□□ 0.25
TRIM25-207ENST00000573108 KDRP35968 1356 aa16.63■□□□□ 0.25
TRIM25-207ENST00000573108 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
TRIM25-207ENST00000573108 KIAA1551Q9HCM1 1747 aa16.62■□□□□ 0.25
TRIM25-207ENST00000573108 ZNF526Q8TF50 670 aaPredicted RBP16.61■□□□□ 0.25
TRIM25-207ENST00000573108 COL5A3P25940 1745 aaPredicted RBP16.61■□□□□ 0.25
TRIM25-207ENST00000573108 ZNF831Q5JPB2 1677 aa16.6■□□□□ 0.25
TRIM25-207ENST00000573108 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-207ENST00000573108 MMP10P09238 476 aa16.6■□□□□ 0.25
TRIM25-207ENST00000573108 GPBP1L1Q9HC44 474 aaPredicted RBP16.6■□□□□ 0.25
TRIM25-207ENST00000573108 KIF13BQ9NQT8 1826 aa16.6■□□□□ 0.25
TRIM25-207ENST00000573108 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
TRIM25-207ENST00000573108 KDM6AO15550 1401 aaPredicted RBP16.59■□□□□ 0.25
TRIM25-207ENST00000573108 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
TRIM25-207ENST00000573108 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.24
TRIM25-207ENST00000573108 PANK3Q9H999 370 aa16.58■□□□□ 0.24
TRIM25-207ENST00000573108 PLEKHG2Q9H7P9 1386 aa16.58■□□□□ 0.24
TRIM25-207ENST00000573108 PXDNLA1KZ92 1463 aa16.58■□□□□ 0.24
TRIM25-207ENST00000573108 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
TRIM25-207ENST00000573108 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
TRIM25-207ENST00000573108 RTCBQ9Y3I0 505 aaKnown RBP16.57■□□□□ 0.24
TRIM25-207ENST00000573108 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
TRIM25-207ENST00000573108 C4AP0C0L4 1744 aa16.56■□□□□ 0.24
TRIM25-207ENST00000573108 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
TRIM25-207ENST00000573108 ZNF530Q6P9A1 599 aaPredicted RBP16.56■□□□□ 0.24
TRIM25-207ENST00000573108 AEBP1Q8IUX7 1158 aa16.56■□□□□ 0.24
TRIM25-207ENST00000573108 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
TRIM25-207ENST00000573108 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
TRIM25-207ENST00000573108 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
TRIM25-207ENST00000573108 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
TRIM25-207ENST00000573108 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
TRIM25-207ENST00000573108 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRIM25-207ENST00000573108 RC3H1Q5TC82 1133 aaKnown RBP16.54■□□□□ 0.24
TRIM25-207ENST00000573108 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
TRIM25-207ENST00000573108 GYS1P13807 737 aa16.53■□□□□ 0.24
TRIM25-207ENST00000573108 CABP4P57796 275 aa16.53■□□□□ 0.24
TRIM25-207ENST00000573108 NLGN1Q8N2Q7 840 aa16.53■□□□□ 0.24
TRIM25-207ENST00000573108 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.24
TRIM25-207ENST00000573108 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 ADRA2BP18089 450 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 TGFB2P61812 414 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 AMOTQ4VCS5 1084 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 MORC1Q86VD1 984 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 TJP1Q07157 1748 aa16.52■□□□□ 0.24
TRIM25-207ENST00000573108 KIF3CO14782 793 aa16.51■□□□□ 0.23
TRIM25-207ENST00000573108 PTCD1O75127 700 aaKnown RBP16.51■□□□□ 0.23
TRIM25-207ENST00000573108 HSPA6P17066 643 aa16.51■□□□□ 0.23
TRIM25-207ENST00000573108 RFC4P35249 363 aa16.51■□□□□ 0.23
TRIM25-207ENST00000573108 MTHFSP49914 203 aa16.51■□□□□ 0.23
TRIM25-207ENST00000573108 DPEP1P16444 411 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 NFATC2IPQ8NCF5 419 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
TRIM25-207ENST00000573108 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
TRIM25-207ENST00000573108 PARP3Q9Y6F1 533 aa16.49■□□□□ 0.23
TRIM25-207ENST00000573108 IL13P35225 146 aa16.48■□□□□ 0.23
TRIM25-207ENST00000573108 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
TRIM25-207ENST00000573108 ADAMTS7Q9UKP4 1686 aa16.47■□□□□ 0.23
TRIM25-207ENST00000573108 FCHSD2O94868 740 aa16.47■□□□□ 0.23
TRIM25-207ENST00000573108 KCNA3P22001 575 aa16.47■□□□□ 0.23
TRIM25-207ENST00000573108 ARHGAP27Q6ZUM4 889 aa16.47■□□□□ 0.23
TRIM25-207ENST00000573108 DDR1Q08345 913 aa16.46■□□□□ 0.23
TRIM25-207ENST00000573108 FKBP8Q14318 412 aa16.46■□□□□ 0.23
TRIM25-207ENST00000573108 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
TRIM25-207ENST00000573108 VIRMAQ69YN4 1812 aaKnown RBP16.46■□□□□ 0.23
TRIM25-207ENST00000573108 ARFGEF1Q9Y6D6 1849 aa16.46■□□□□ 0.23
TRIM25-207ENST00000573108 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
TRIM25-207ENST00000573108 IFFO2Q5TF58 517 aa16.44■□□□□ 0.22
TRIM25-207ENST00000573108 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
TRIM25-207ENST00000573108 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
TRIM25-207ENST00000573108 AKAP4Q5JQC9 854 aa16.43■□□□□ 0.22
TRIM25-207ENST00000573108 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
TRIM25-207ENST00000573108 DNAJC10Q8IXB1 793 aa16.43■□□□□ 0.22
TRIM25-207ENST00000573108 SLC52A2Q9HAB3 445 aa16.42■□□□□ 0.22
TRIM25-207ENST00000573108 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
TRIM25-207ENST00000573108 HMOX1P09601 288 aa16.41■□□□□ 0.22
TRIM25-207ENST00000573108 CHRNA5P30532 468 aa16.41■□□□□ 0.22
TRIM25-207ENST00000573108 SLC39A6Q13433 755 aa16.41■□□□□ 0.22
TRIM25-207ENST00000573108 PIM2Q9P1W9 311 aa16.41■□□□□ 0.22
TRIM25-207ENST00000573108 MRC1P22897 1456 aa16.41■□□□□ 0.22
TRIM25-207ENST00000573108 KCPQ6ZWJ8 1503 aa16.4■□□□□ 0.22
TRIM25-207ENST00000573108 POLRMTO00411 1230 aaKnown RBP16.4■□□□□ 0.22
TRIM25-207ENST00000573108 TM4SF1P30408 202 aa16.4■□□□□ 0.22
TRIM25-207ENST00000573108 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
TRIM25-207ENST00000573108 USPL1Q5W0Q7 1092 aa16.4■□□□□ 0.22
TRIM25-207ENST00000573108 SOS1Q07889 1333 aaPredicted RBP16.4■□□□□ 0.22
TRIM25-207ENST00000573108 AFDNP55196 1824 aaKnown RBP16.4■□□□□ 0.22
TRIM25-207ENST00000573108 RNMTO43148 476 aaKnown RBP16.39■□□□□ 0.21
TRIM25-207ENST00000573108 TOMM70O94826 608 aa16.39■□□□□ 0.21
TRIM25-207ENST00000573108 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
TRIM25-207ENST00000573108 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
TRIM25-207ENST00000573108 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
TRIM25-207ENST00000573108 SBF1O95248 1867 aa16.37■□□□□ 0.21
TRIM25-207ENST00000573108 ZPR1O75312 459 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms