RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 PER1O15534 1290 aaPredicted RBP15.95■□□□□ 0.14
PRPF8-206ENST00000572723 IL13P35225 146 aa15.95■□□□□ 0.14
PRPF8-206ENST00000572723 ITPK1Q13572 414 aa15.95■□□□□ 0.14
PRPF8-206ENST00000572723 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
PRPF8-206ENST00000572723 ZNF784Q8NCA9 323 aaPredicted RBP15.95■□□□□ 0.14
PRPF8-206ENST00000572723 GRIN3BO60391 1043 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 MTHFSP49914 203 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 UBR3Q6ZT12 1888 aa15.94■□□□□ 0.14
PRPF8-206ENST00000572723 PHF14O94880 888 aa15.93■□□□□ 0.14
PRPF8-206ENST00000572723 CABP4P57796 275 aa15.93■□□□□ 0.14
PRPF8-206ENST00000572723 PELP1Q8IZL8 1130 aaKnown RBP15.93■□□□□ 0.14
PRPF8-206ENST00000572723 KDRP35968 1356 aa15.92■□□□□ 0.14
PRPF8-206ENST00000572723 GNPATO15228 680 aa15.92■□□□□ 0.14
PRPF8-206ENST00000572723 RC3H1Q5TC82 1133 aaKnown RBP15.92■□□□□ 0.14
PRPF8-206ENST00000572723 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
PRPF8-206ENST00000572723 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
PRPF8-206ENST00000572723 TRAPPC3LQ5T215 181 aa15.9■□□□□ 0.14
PRPF8-206ENST00000572723 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
PRPF8-206ENST00000572723 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
PRPF8-206ENST00000572723 RTCBQ9Y3I0 505 aaKnown RBP15.9■□□□□ 0.14
PRPF8-206ENST00000572723 AKAP4Q5JQC9 854 aa15.89■□□□□ 0.13
PRPF8-206ENST00000572723 KDM6AO15550 1401 aaPredicted RBP15.88■□□□□ 0.13
PRPF8-206ENST00000572723 YBX3P16989 372 aaKnown RBP eCLIP15.88■□□□□ 0.132e-8■■□□□ 13.3
PRPF8-206ENST00000572723 ADRA2BP18089 450 aa15.88■□□□□ 0.13
PRPF8-206ENST00000572723 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
PRPF8-206ENST00000572723 ZNF831Q5JPB2 1677 aa15.88■□□□□ 0.13
PRPF8-206ENST00000572723 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
PRPF8-206ENST00000572723 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
PRPF8-206ENST00000572723 CNTNAP4Q9C0A0 1308 aa15.87■□□□□ 0.13
PRPF8-206ENST00000572723 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
PRPF8-206ENST00000572723 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
PRPF8-206ENST00000572723 ARHGEF1Q92888 912 aaKnown RBP15.86■□□□□ 0.13
PRPF8-206ENST00000572723 NPC1L1Q9UHC9 1359 aa15.86■□□□□ 0.13
PRPF8-206ENST00000572723 RFC4P35249 363 aa15.85■□□□□ 0.13
PRPF8-206ENST00000572723 GOLGB1Q14789 3259 aaKnown RBP15.85■□□□□ 0.13
PRPF8-206ENST00000572723 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
PRPF8-206ENST00000572723 MMP10P09238 476 aa15.84■□□□□ 0.13
PRPF8-206ENST00000572723 HMOX1P09601 288 aa15.84■□□□□ 0.13
PRPF8-206ENST00000572723 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
PRPF8-206ENST00000572723 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
PRPF8-206ENST00000572723 SCN11AQ9UI33 1791 aa15.83■□□□□ 0.12
PRPF8-206ENST00000572723 RNMTO43148 476 aaKnown RBP15.83■□□□□ 0.12
PRPF8-206ENST00000572723 GYS1P13807 737 aa15.81■□□□□ 0.12
PRPF8-206ENST00000572723 COL5A3P25940 1745 aaPredicted RBP15.81■□□□□ 0.12
PRPF8-206ENST00000572723 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
PRPF8-206ENST00000572723 TGFB2P61812 414 aa15.81■□□□□ 0.12
PRPF8-206ENST00000572723 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
PRPF8-206ENST00000572723 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
PRPF8-206ENST00000572723 PARP3Q9Y6F1 533 aa15.79■□□□□ 0.12
PRPF8-206ENST00000572723 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
PRPF8-206ENST00000572723 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
PRPF8-206ENST00000572723 CCDC87Q9NVE4 849 aa15.78■□□□□ 0.12
PRPF8-206ENST00000572723 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
PRPF8-206ENST00000572723 SLC39A6Q13433 755 aa15.77■□□□□ 0.12
PRPF8-206ENST00000572723 DNAJC10Q8IXB1 793 aa15.77■□□□□ 0.12
PRPF8-206ENST00000572723 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
PRPF8-206ENST00000572723 GIGYF1O75420 1035 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-206ENST00000572723 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
PRPF8-206ENST00000572723 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
PRPF8-206ENST00000572723 GAS2L2Q8NHY3 880 aa15.76■□□□□ 0.11
PRPF8-206ENST00000572723 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
PRPF8-206ENST00000572723 USP42Q9H9J4 1324 aaKnown RBP15.75■□□□□ 0.11
PRPF8-206ENST00000572723 A0A0G2JLW4 131 aa15.75■□□□□ 0.11
PRPF8-206ENST00000572723 CFAP53Q96M91 514 aa15.75■□□□□ 0.11
PRPF8-206ENST00000572723 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
PRPF8-206ENST00000572723 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
PRPF8-206ENST00000572723 MRC1P22897 1456 aa15.74■□□□□ 0.11
PRPF8-206ENST00000572723 GNAT3A8MTJ3 354 aa15.74■□□□□ 0.11
PRPF8-206ENST00000572723 ZPR1O75312 459 aa15.74■□□□□ 0.11
PRPF8-206ENST00000572723 FKBP8Q14318 412 aa15.74■□□□□ 0.11
PRPF8-206ENST00000572723 IL17REQ8NFR9 667 aa15.74■□□□□ 0.11
PRPF8-206ENST00000572723 CICQ96RK0 1608 aaPredicted RBP15.74■□□□□ 0.11
PRPF8-206ENST00000572723 COL3A1P02461 1466 aaPredicted RBP15.73■□□□□ 0.11
PRPF8-206ENST00000572723 TM4SF1P30408 202 aa15.73■□□□□ 0.11
PRPF8-206ENST00000572723 NUDCQ9Y266 331 aa15.73■□□□□ 0.11
PRPF8-206ENST00000572723 TJP1Q07157 1748 aa15.73■□□□□ 0.11
PRPF8-206ENST00000572723 ADAMTS7Q9UKP4 1686 aa15.73■□□□□ 0.11
PRPF8-206ENST00000572723 SOS1Q07889 1333 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-206ENST00000572723 C4AP0C0L4 1744 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 STARD3NLO95772 234 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 DPEP1P16444 411 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 TEFQ10587 303 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 TTC5Q8N0Z6 440 aa15.72■□□□□ 0.11
PRPF8-206ENST00000572723 TEX13AQ9BXU3 409 aaPredicted RBP15.72■□□□□ 0.11
PRPF8-206ENST00000572723 PXDNLA1KZ92 1463 aa15.71■□□□□ 0.11
PRPF8-206ENST00000572723 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
PRPF8-206ENST00000572723 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
PRPF8-206ENST00000572723 NARFQ9UHQ1 456 aa15.71■□□□□ 0.11
PRPF8-206ENST00000572723 BCS1LQ9Y276 419 aa15.71■□□□□ 0.11
PRPF8-206ENST00000572723 N4BP2Q86UW6 1770 aaPredicted RBP15.71■□□□□ 0.11
PRPF8-206ENST00000572723 ATP10DQ9P241 1426 aa15.7■□□□□ 0.1
PRPF8-206ENST00000572723 KCNA3P22001 575 aa15.7■□□□□ 0.1
PRPF8-206ENST00000572723 DDR1Q08345 913 aa15.7■□□□□ 0.1
PRPF8-206ENST00000572723 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
PRPF8-206ENST00000572723 PHACTR3Q96KR7 559 aa15.7■□□□□ 0.1
PRPF8-206ENST00000572723 KCPQ6ZWJ8 1503 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms