RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
SPG7-221ENST00000569720 GNPATO15228 680 aa17.91■□□□□ 0.46
SPG7-221ENST00000569720 ZNF530Q6P9A1 599 aaPredicted RBP17.91■□□□□ 0.46
SPG7-221ENST00000569720 ATG3Q9NT62 314 aa17.91■□□□□ 0.46
SPG7-221ENST00000569720 GOLGB1Q14789 3259 aaKnown RBP17.91■□□□□ 0.46
SPG7-221ENST00000569720 ITPK1Q13572 414 aa17.9■□□□□ 0.46
SPG7-221ENST00000569720 ZNF831Q5JPB2 1677 aa17.9■□□□□ 0.46
SPG7-221ENST00000569720 YBX3P16989 372 aaKnown RBP eCLIP17.89■□□□□ 0.45
SPG7-221ENST00000569720 C1orf141Q5JVX7 400 aa17.89■□□□□ 0.45
SPG7-221ENST00000569720 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
SPG7-221ENST00000569720 CABP4P57796 275 aa17.88■□□□□ 0.45
SPG7-221ENST00000569720 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
SPG7-221ENST00000569720 MTHFSP49914 203 aa17.87■□□□□ 0.45
SPG7-221ENST00000569720 SMIM5Q71RC9 77 aa17.87■□□□□ 0.45
SPG7-221ENST00000569720 SULT6B1Q6IMI4 303 aa17.86■□□□□ 0.45
SPG7-221ENST00000569720 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
SPG7-221ENST00000569720 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
SPG7-221ENST00000569720 KDRP35968 1356 aa17.86■□□□□ 0.45
SPG7-221ENST00000569720 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
SPG7-221ENST00000569720 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
SPG7-221ENST00000569720 TRAPPC3LQ5T215 181 aa17.85■□□□□ 0.45
SPG7-221ENST00000569720 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
SPG7-221ENST00000569720 KIF7Q2M1P5 1343 aa17.83■□□□□ 0.44
SPG7-221ENST00000569720 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
SPG7-221ENST00000569720 IL13P35225 146 aa17.83■□□□□ 0.44
SPG7-221ENST00000569720 C1QTNF8P60827 252 aa17.83■□□□□ 0.44
SPG7-221ENST00000569720 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
SPG7-221ENST00000569720 SCN11AQ9UI33 1791 aa17.83■□□□□ 0.44
SPG7-221ENST00000569720 ADRA2BP18089 450 aa17.82■□□□□ 0.44
SPG7-221ENST00000569720 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
SPG7-221ENST00000569720 SLC4A9Q96Q91 983 aa17.82■□□□□ 0.44
SPG7-221ENST00000569720 CNTNAP4Q9C0A0 1308 aa17.81■□□□□ 0.44
SPG7-221ENST00000569720 MMP10P09238 476 aa17.81■□□□□ 0.44
SPG7-221ENST00000569720 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
SPG7-221ENST00000569720 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
SPG7-221ENST00000569720 RPS6KA4O75676 772 aa17.8■□□□□ 0.44
SPG7-221ENST00000569720 RFC4P35249 363 aa17.8■□□□□ 0.44
SPG7-221ENST00000569720 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
SPG7-221ENST00000569720 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
SPG7-221ENST00000569720 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
SPG7-221ENST00000569720 AKAP4Q5JQC9 854 aa17.79■□□□□ 0.44
SPG7-221ENST00000569720 ARHGEF1Q92888 912 aaKnown RBP17.79■□□□□ 0.44
SPG7-221ENST00000569720 KIF13BQ9NQT8 1826 aa17.79■□□□□ 0.44
SPG7-221ENST00000569720 SENP3-EIF4A1A0A087X0R7 540 aa17.78■□□□□ 0.44
SPG7-221ENST00000569720 CICQ96RK0 1608 aaPredicted RBP17.77■□□□□ 0.44
SPG7-221ENST00000569720 WWC3Q9ULE0 1092 aa17.77■□□□□ 0.44
SPG7-221ENST00000569720 C4AP0C0L4 1744 aa17.77■□□□□ 0.44
SPG7-221ENST00000569720 ATP10DQ9P241 1426 aa17.76■□□□□ 0.43
SPG7-221ENST00000569720 TGFB2P61812 414 aa17.76■□□□□ 0.43
SPG7-221ENST00000569720 CC2D1BQ5T0F9 858 aaKnown RBP17.76■□□□□ 0.43
SPG7-221ENST00000569720 CCDC87Q9NVE4 849 aa17.76■□□□□ 0.43
SPG7-221ENST00000569720 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
SPG7-221ENST00000569720 TJP1Q07157 1748 aa17.75■□□□□ 0.43
SPG7-221ENST00000569720 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
SPG7-221ENST00000569720 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
SPG7-221ENST00000569720 HMOX1P09601 288 aa17.75■□□□□ 0.43
SPG7-221ENST00000569720 GYS1P13807 737 aa17.75■□□□□ 0.43
SPG7-221ENST00000569720 CRKLP46109 303 aaKnown RBP17.75■□□□□ 0.43
SPG7-221ENST00000569720 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
SPG7-221ENST00000569720 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
SPG7-221ENST00000569720 GPBP1L1Q9HC44 474 aaPredicted RBP17.73■□□□□ 0.43
SPG7-221ENST00000569720 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
SPG7-221ENST00000569720 KIAA1551Q9HCM1 1747 aa17.72■□□□□ 0.43
SPG7-221ENST00000569720 PXDNLA1KZ92 1463 aa17.72■□□□□ 0.43
SPG7-221ENST00000569720 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
SPG7-221ENST00000569720 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
SPG7-221ENST00000569720 MRC1P22897 1456 aa17.71■□□□□ 0.43
SPG7-221ENST00000569720 ADCY9O60503 1353 aa17.71■□□□□ 0.43
SPG7-221ENST00000569720 NPC1L1Q9UHC9 1359 aa17.71■□□□□ 0.43
SPG7-221ENST00000569720 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
SPG7-221ENST00000569720 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
SPG7-221ENST00000569720 BCS1LQ9Y276 419 aa17.7■□□□□ 0.42
SPG7-221ENST00000569720 USP42Q9H9J4 1324 aaKnown RBP17.7■□□□□ 0.42
SPG7-221ENST00000569720 ADAMTS7Q9UKP4 1686 aa17.69■□□□□ 0.42
SPG7-221ENST00000569720 CNGB1Q14028 1251 aaPredicted RBP17.69■□□□□ 0.42
SPG7-221ENST00000569720 DNAJC10Q8IXB1 793 aa17.69■□□□□ 0.42
SPG7-221ENST00000569720 SRP68Q9UHB9 627 aaKnown RBP17.69■□□□□ 0.42
SPG7-221ENST00000569720 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SPG7-221ENST00000569720 ZPR1O75312 459 aa17.68■□□□□ 0.42
SPG7-221ENST00000569720 BRCA1P38398 1863 aaKnown RBP17.68■□□□□ 0.42
SPG7-221ENST00000569720 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
SPG7-221ENST00000569720 ZNF526Q8TF50 670 aaPredicted RBP17.68■□□□□ 0.42
SPG7-221ENST00000569720 DPEP1P16444 411 aa17.67■□□□□ 0.42
SPG7-221ENST00000569720 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
SPG7-221ENST00000569720 FKBP8Q14318 412 aa17.67■□□□□ 0.42
SPG7-221ENST00000569720 ARFGEF1Q9Y6D6 1849 aa17.66■□□□□ 0.42
SPG7-221ENST00000569720 FCHSD2O94868 740 aa17.66■□□□□ 0.42
SPG7-221ENST00000569720 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
SPG7-221ENST00000569720 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
SPG7-221ENST00000569720 CYP19A1P11511 503 aaPredicted RBP17.65■□□□□ 0.42
SPG7-221ENST00000569720 ARHGAP27Q6ZUM4 889 aa17.65■□□□□ 0.42
SPG7-221ENST00000569720 VSIG10Q8N0Z9 540 aa17.65■□□□□ 0.42
SPG7-221ENST00000569720 GAS2L2Q8NHY3 880 aa17.65■□□□□ 0.42
SPG7-221ENST00000569720 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
SPG7-221ENST00000569720 UBR2Q8IWV8 1755 aa17.65■□□□□ 0.42
SPG7-221ENST00000569720 SOS1Q07889 1333 aaPredicted RBP17.65■□□□□ 0.42
SPG7-221ENST00000569720 TEFQ10587 303 aa17.64■□□□□ 0.41
SPG7-221ENST00000569720 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
SPG7-221ENST00000569720 PIM2Q9P1W9 311 aa17.64■□□□□ 0.41
SPG7-221ENST00000569720 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms