RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 RFX1P22670 979 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 PSME1Q06323 249 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 TRIM50Q86XT4 487 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 CCDC155Q8N6L0 562 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 ZNF594Q96JF6 807 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 ZSCAN10Q96SZ4 725 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 ZNF358Q9NW07 568 aa6.72□□□□□ -1.33
HMGB1P6-201ENST00000569046 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 H3BM21 787 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 SMTNP53814 917 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 TLR1Q15399 786 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 CCDC102BQ68D86 513 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 TREML4Q6UXN2 200 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 NBPF15Q8N660 670 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 SLC4A9Q96Q91 983 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP3Q9Y6I4 520 aa6.71□□□□□ -1.34
HMGB1P6-201ENST00000569046 RASA1P20936 1047 aa6.7□□□□□ -1.34
HMGB1P6-201ENST00000569046 ATP1A2P50993 1020 aa6.7□□□□□ -1.34
HMGB1P6-201ENST00000569046 LARGE2Q8N3Y3 721 aa6.7□□□□□ -1.34
HMGB1P6-201ENST00000569046 ERBB4Q15303 1308 aa6.7□□□□□ -1.34
HMGB1P6-201ENST00000569046 A6NJY4 79 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 SFI1A8K8P3 1242 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 WFS1O76024 890 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 PHKA2P46019 1235 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 EPHA4P54764 986 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 SRPK2P78362 688 aaKnown RBP6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 PTK7Q13308 1070 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 MTFR1Q15390 333 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 C4orf17Q53FE4 359 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 PPARGC1BQ86YN6 1023 aaKnown RBP6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 NPAS3Q8IXF0 933 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 ZNF295-AS1Q8N0V1 137 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 SIX5Q8N196 739 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 CCDC82Q8N4S0 544 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 VRTNQ9H8Y1 702 aa6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 CUEDC1Q9NWM3 386 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 IQSEC3Q9UPP2 1182 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P6-201ENST00000569046 ABCC9O60706 1549 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L15C9J2P7 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L10C9JJH3 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L13C9JLJ4 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L12C9JPN9 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L11C9JVI0 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L21D6R901 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L18D6R9N7 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L22D6RA61 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L17D6RBQ6 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L19D6RCP7 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L20D6RJB6 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 USP17L24Q0WX57 530 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 TMEM214Q6NUQ4 689 aaKnown RBP6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 TAS1R3Q7RTX0 852 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 TNS4Q8IZW8 715 aa6.68□□□□□ -1.34
HMGB1P6-201ENST00000569046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 FAM196BA6NMK8 535 aa6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 ITGA6P23229 1130 aa6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 DPYDQ12882 1025 aa6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 WDR44Q5JSH3 913 aa6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 TSEN2Q8NCE0 465 aaKnown RBP6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 RHBDD1Q8TEB9 315 aa6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 CCDC97Q96F63 343 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P6-201ENST00000569046 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 CDK2AP1O14519 115 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 BACH1O14867 736 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 FOXK2Q01167 660 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 TBCELQ5QJ74 424 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 GPR161Q8N6U8 529 aaKnown RBP6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 SLC16A10Q8TF71 515 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 ARXQ96QS3 562 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 TIMMDC1Q9NPL8 285 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 SCHIP1Q9P0W5 487 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 SERPINA10Q9UK55 444 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 DYRK1BQ9Y463 629 aa6.66□□□□□ -1.34
HMGB1P6-201ENST00000569046 LGR5O75473 907 aa6.65□□□□□ -1.34
HMGB1P6-201ENST00000569046 VSIG8P0DPA2 414 aa6.65□□□□□ -1.34
HMGB1P6-201ENST00000569046 GNASQ5JWF2 1037 aa6.65□□□□□ -1.34
HMGB1P6-201ENST00000569046 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.34
HMGB1P6-201ENST00000569046 GAS2L1Q99501 681 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P6-201ENST00000569046 M0R2N6 131 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 THBS1P07996 1170 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 GTF2E1P29083 439 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 PLA2G4AP47712 749 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 SEC13P55735 322 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 DBN1Q16643 649 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 VWA5B2Q8N398 1253 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 ZDHHC1Q8WTX9 485 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 NANOS1Q8WY41 292 aaKnown RBP6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 IRF7Q92985 503 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 TSPAN10Q9H1Z9 355 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 ZMIZ1Q9ULJ6 1067 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 PARP3Q9Y6F1 533 aa6.64□□□□□ -1.35
HMGB1P6-201ENST00000569046 GMPRP36959 345 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms