RNA–Protein interactions for RNA: ENST00000566426.1

PDXDC1-213, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 283 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-213ENST00000566426 TRAPPC3LQ5T215 181 aa28.03■■■□□ 2.08
PDXDC1-213ENST00000566426 NLGN1Q8N2Q7 840 aa28.03■■■□□ 2.08
PDXDC1-213ENST00000566426 RTCBQ9Y3I0 505 aaKnown RBP28.03■■■□□ 2.08
PDXDC1-213ENST00000566426 ATG3Q9NT62 314 aa28.02■■■□□ 2.08
PDXDC1-213ENST00000566426 APLP1P51693 650 aa28.01■■■□□ 2.07
PDXDC1-213ENST00000566426 BCS1LQ9Y276 419 aa28■■■□□ 2.07
PDXDC1-213ENST00000566426 CICQ96RK0 1608 aaPredicted RBP28■■■□□ 2.07
PDXDC1-213ENST00000566426 PXDNLA1KZ92 1463 aa27.98■■■□□ 2.07
PDXDC1-213ENST00000566426 TOMM70O94826 608 aa27.98■■■□□ 2.07
PDXDC1-213ENST00000566426 ADRA2BP18089 450 aa27.97■■■□□ 2.07
PDXDC1-213ENST00000566426 PLEKHG2Q9H7P9 1386 aa27.97■■■□□ 2.07
PDXDC1-213ENST00000566426 ANKRD26Q9UPS8 1709 aa27.96■■■□□ 2.07
PDXDC1-213ENST00000566426 A0A0G2JLW4 131 aa27.96■■■□□ 2.07
PDXDC1-213ENST00000566426 RC3H1Q5TC82 1133 aaKnown RBP27.96■■■□□ 2.07
PDXDC1-213ENST00000566426 CCDC87Q9NVE4 849 aa27.96■■■□□ 2.07
PDXDC1-213ENST00000566426 POLKQ9UBT6 870 aa27.96■■■□□ 2.07
PDXDC1-213ENST00000566426 ERVV-2B6SEH9 535 aa27.95■■■□□ 2.06
PDXDC1-213ENST00000566426 ARHGAP27Q6ZUM4 889 aa27.95■■■□□ 2.06
PDXDC1-213ENST00000566426 KIF13BQ9NQT8 1826 aa27.95■■■□□ 2.06
PDXDC1-213ENST00000566426 HSP90AB1P08238 724 aaKnown RBP27.94■■■□□ 2.06
PDXDC1-213ENST00000566426 RBM42Q9BTD8 480 aaKnown RBP27.94■■■□□ 2.06
PDXDC1-213ENST00000566426 RFC4P35249 363 aa27.93■■■□□ 2.06
PDXDC1-213ENST00000566426 ARHGEF1Q92888 912 aaKnown RBP27.93■■■□□ 2.06
PDXDC1-213ENST00000566426 KDRP35968 1356 aa27.92■■■□□ 2.06
PDXDC1-213ENST00000566426 PARP3Q9Y6F1 533 aa27.92■■■□□ 2.06
PDXDC1-213ENST00000566426 C10orf71Q711Q0 1435 aa27.92■■■□□ 2.06
PDXDC1-213ENST00000566426 FCHSD2O94868 740 aa27.91■■■□□ 2.06
PDXDC1-213ENST00000566426 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
PDXDC1-213ENST00000566426 DCAF5Q96JK2 942 aa27.91■■■□□ 2.06
PDXDC1-213ENST00000566426 CNTNAP4Q9C0A0 1308 aa27.91■■■□□ 2.06
PDXDC1-213ENST00000566426 RPS6KA4O75676 772 aa27.9■■■□□ 2.06
PDXDC1-213ENST00000566426 DPEP1P16444 411 aa27.9■■■□□ 2.06
PDXDC1-213ENST00000566426 N4BP2Q86UW6 1770 aaPredicted RBP27.9■■■□□ 2.06
PDXDC1-213ENST00000566426 GYS1P13807 737 aa27.89■■■□□ 2.06
PDXDC1-213ENST00000566426 SLC4A9Q96Q91 983 aa27.89■■■□□ 2.06
PDXDC1-213ENST00000566426 PLEKHO1Q53GL0 409 aaPredicted RBP27.88■■■□□ 2.05
PDXDC1-213ENST00000566426 ZNF831Q5JPB2 1677 aa27.87■■■□□ 2.05
PDXDC1-213ENST00000566426 KIAA1551Q9HCM1 1747 aa27.87■■■□□ 2.05
PDXDC1-213ENST00000566426 CABP4P57796 275 aa27.86■■■□□ 2.05
PDXDC1-213ENST00000566426 DNAJC5GQ8N7S2 189 aa27.86■■■□□ 2.05
PDXDC1-213ENST00000566426 NMRK2Q9NPI5 230 aa27.86■■■□□ 2.05
PDXDC1-213ENST00000566426 TNNT2P45379 298 aaPredicted RBP27.85■■■□□ 2.05
PDXDC1-213ENST00000566426 C16orf71Q8IYS4 520 aaPredicted RBP27.85■■■□□ 2.05
PDXDC1-213ENST00000566426 C4AP0C0L4 1744 aa27.84■■■□□ 2.05
PDXDC1-213ENST00000566426 AMOTQ4VCS5 1084 aa27.84■■■□□ 2.05
PDXDC1-213ENST00000566426 PIM2Q9P1W9 311 aa27.84■■■□□ 2.05
PDXDC1-213ENST00000566426 C9orf131Q5VYM1 1079 aa27.83■■■□□ 2.05
PDXDC1-213ENST00000566426 RBM46Q8TBY0 533 aaKnown RBP27.83■■■□□ 2.05
PDXDC1-213ENST00000566426 ZNF530Q6P9A1 599 aaPredicted RBP27.82■■■□□ 2.04
PDXDC1-213ENST00000566426 KCNA3P22001 575 aa27.81■■■□□ 2.04
PDXDC1-213ENST00000566426 COL5A3P25940 1745 aaPredicted RBP27.8■■■□□ 2.04
PDXDC1-213ENST00000566426 MTHFSP49914 203 aa27.79■■■□□ 2.04
PDXDC1-213ENST00000566426 DALRD3Q5D0E6 543 aaKnown RBP27.79■■■□□ 2.04
PDXDC1-213ENST00000566426 POLR3GLQ9BT43 218 aa27.79■■■□□ 2.04
PDXDC1-213ENST00000566426 KDM2BQ8NHM5 1336 aa27.78■■■□□ 2.04
PDXDC1-213ENST00000566426 PTCD1O75127 700 aaKnown RBP27.78■■■□□ 2.04
PDXDC1-213ENST00000566426 C1orf141Q5JVX7 400 aa27.78■■■□□ 2.04
PDXDC1-213ENST00000566426 BRCA1P38398 1863 aaKnown RBP27.77■■■□□ 2.04
PDXDC1-213ENST00000566426 CRKLP46109 303 aaKnown RBP27.77■■■□□ 2.04
PDXDC1-213ENST00000566426 FSTL1Q12841 308 aa27.77■■■□□ 2.04
PDXDC1-213ENST00000566426 KDM6AO15550 1401 aaPredicted RBP27.76■■■□□ 2.04
PDXDC1-213ENST00000566426 TIMELESSQ9UNS1 1208 aa27.76■■■□□ 2.03
PDXDC1-213ENST00000566426 ARFGEF1Q9Y6D6 1849 aa27.76■■■□□ 2.03
PDXDC1-213ENST00000566426 MYH14Q7Z406 1995 aaKnown RBP27.75■■■□□ 2.03
PDXDC1-213ENST00000566426 USP42Q9H9J4 1324 aaKnown RBP27.74■■■□□ 2.03
PDXDC1-213ENST00000566426 NFATC2IPQ8NCF5 419 aa27.74■■■□□ 2.03
PDXDC1-213ENST00000566426 FKBP8Q14318 412 aa27.73■■■□□ 2.03
PDXDC1-213ENST00000566426 RNF181Q9P0P0 153 aa27.73■■■□□ 2.03
PDXDC1-213ENST00000566426 SRP68Q9UHB9 627 aaKnown RBP27.73■■■□□ 2.03
PDXDC1-213ENST00000566426 KLRG1Q96E93 195 aa27.72■■■□□ 2.03
PDXDC1-213ENST00000566426 WDR90Q96KV7 1748 aa27.71■■■□□ 2.03
PDXDC1-213ENST00000566426 DDR1Q08345 913 aa27.7■■■□□ 2.02
PDXDC1-213ENST00000566426 KCPQ6ZWJ8 1503 aa27.69■■■□□ 2.02
PDXDC1-213ENST00000566426 ZPR1O75312 459 aa27.69■■■□□ 2.02
PDXDC1-213ENST00000566426 RRAGCQ9HB90 399 aa27.69■■■□□ 2.02
PDXDC1-213ENST00000566426 CHRNA5P30532 468 aa27.68■■■□□ 2.02
PDXDC1-213ENST00000566426 TM4SF1P30408 202 aa27.67■■■□□ 2.02
PDXDC1-213ENST00000566426 AEBP1Q8IUX7 1158 aa27.67■■■□□ 2.02
PDXDC1-213ENST00000566426 JMYQ8N9B5 988 aa27.67■■■□□ 2.02
PDXDC1-213ENST00000566426 POLRMTO00411 1230 aaKnown RBP27.66■■■□□ 2.02
PDXDC1-213ENST00000566426 SULT6B1Q6IMI4 303 aa27.66■■■□□ 2.02
PDXDC1-213ENST00000566426 INTS5Q6P9B9 1019 aaKnown RBP27.66■■■□□ 2.02
PDXDC1-213ENST00000566426 PANK3Q9H999 370 aa27.66■■■□□ 2.02
PDXDC1-213ENST00000566426 HTRA3P83110 453 aa27.65■■■□□ 2.02
PDXDC1-213ENST00000566426 MORC1Q86VD1 984 aa27.65■■■□□ 2.02
PDXDC1-213ENST00000566426 SMC1BQ8NDV3 1235 aa27.64■■■□□ 2.02
PDXDC1-213ENST00000566426 ZC3H4Q9UPT8 1303 aaKnown RBP27.64■■■□□ 2.01
PDXDC1-213ENST00000566426 USPL1Q5W0Q7 1092 aa27.62■■■□□ 2.01
PDXDC1-213ENST00000566426 TNRC6CQ9HCJ0 1690 aaKnown RBP27.6■■■□□ 2.01
PDXDC1-213ENST00000566426 AKAP4Q5JQC9 854 aa27.6■■■□□ 2.01
PDXDC1-213ENST00000566426 DNAJC10Q8IXB1 793 aa27.6■■■□□ 2.01
PDXDC1-213ENST00000566426 TJP1Q07157 1748 aa27.6■■■□□ 2.01
PDXDC1-213ENST00000566426 SBF1O95248 1867 aa27.59■■■□□ 2.01
PDXDC1-213ENST00000566426 TRIM26Q12899 539 aaPredicted RBP27.59■■■□□ 2.01
PDXDC1-213ENST00000566426 SLC52A2Q9HAB3 445 aa27.59■■■□□ 2.01
PDXDC1-213ENST00000566426 SOS1Q07889 1333 aaPredicted RBP27.59■■■□□ 2.01
PDXDC1-213ENST00000566426 LMNB1P20700 586 aa27.58■■■□□ 2.01
PDXDC1-213ENST00000566426 EIF4G2P78344 907 aaKnown RBP eCLIP27.58■■■□□ 2.01
PDXDC1-213ENST00000566426 COL13A1Q5TAT6 717 aaPredicted RBP27.58■■■□□ 2.01
PDXDC1-213ENST00000566426 NARFQ9UHQ1 456 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms