RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 MYOM1P52179 1685 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 NAIPQ13075 1403 aa9.13□□□□□ -0.95
UBFD1-204ENST00000565634 SPATA31A5Q5VU36 1347 aa9.12□□□□□ -0.95
UBFD1-204ENST00000565634 SPATA31A7Q8IWB4 1347 aa9.12□□□□□ -0.95
UBFD1-204ENST00000565634 ABCA3Q99758 1704 aa9.12□□□□□ -0.95
UBFD1-204ENST00000565634 PTF1AQ7RTS3 328 aa9.12□□□□□ -0.95
UBFD1-204ENST00000565634 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
UBFD1-204ENST00000565634 PPP4CP60510 307 aa9.11□□□□□ -0.95
UBFD1-204ENST00000565634 CHRNA2Q15822 529 aa9.11□□□□□ -0.95
UBFD1-204ENST00000565634 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
UBFD1-204ENST00000565634 LRPPRCP42704 1394 aaKnown RBP9.11□□□□□ -0.95
UBFD1-204ENST00000565634 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
UBFD1-204ENST00000565634 PSME1Q06323 249 aa9.1□□□□□ -0.95
UBFD1-204ENST00000565634 TMEM132EQ6IEE7 984 aa9.1□□□□□ -0.95
UBFD1-204ENST00000565634 NPDC1Q9NQX5 325 aaPredicted RBP9.1□□□□□ -0.95
UBFD1-204ENST00000565634 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
UBFD1-204ENST00000565634 NUP155O75694 1391 aa9.1□□□□□ -0.95
UBFD1-204ENST00000565634 ROCK1Q13464 1354 aa9.1□□□□□ -0.95
UBFD1-204ENST00000565634 GPR162Q16538 588 aa9.09□□□□□ -0.95
UBFD1-204ENST00000565634 TJAP1Q5JTD0 557 aa9.09□□□□□ -0.95
UBFD1-204ENST00000565634 KIF1BO60333 1816 aa9.09□□□□□ -0.95
UBFD1-204ENST00000565634 NEXMIFQ5QGS0 1516 aa9.09□□□□□ -0.95
UBFD1-204ENST00000565634 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
UBFD1-204ENST00000565634 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBFD1-204ENST00000565634 NUDT18Q6ZVK8 323 aa9.08□□□□□ -0.96
UBFD1-204ENST00000565634 TTC13Q8NBP0 860 aa9.08□□□□□ -0.96
UBFD1-204ENST00000565634 IQGAP3Q86VI3 1631 aa9.08□□□□□ -0.96
UBFD1-204ENST00000565634 RAB3GAP2Q9H2M9 1393 aa9.08□□□□□ -0.96
UBFD1-204ENST00000565634 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
UBFD1-204ENST00000565634 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
UBFD1-204ENST00000565634 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
UBFD1-204ENST00000565634 SPATA31A1Q5TZJ5 1347 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 HFM1A2PYH4 1435 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 TNS3Q68CZ2 1445 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 NUTM2GQ5VZR2 741 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 ADGRB2O60241 1585 aa9.06□□□□□ -0.96
UBFD1-204ENST00000565634 CLTCL1P53675 1640 aa9.05□□□□□ -0.96
UBFD1-204ENST00000565634 FMN2Q9NZ56 1722 aa9.05□□□□□ -0.96
UBFD1-204ENST00000565634 SBF2Q86WG5 1849 aa9.05□□□□□ -0.96
UBFD1-204ENST00000565634 ZC3H6P61129 1189 aaKnown RBP9.05□□□□□ -0.96
UBFD1-204ENST00000565634 ZNF526Q8TF50 670 aaPredicted RBP9.05□□□□□ -0.96
UBFD1-204ENST00000565634 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
UBFD1-204ENST00000565634 TECPR2O15040 1411 aa9.05□□□□□ -0.96
UBFD1-204ENST00000565634 COL14A1Q05707 1796 aaKnown RBP9.04□□□□□ -0.96
UBFD1-204ENST00000565634 EVA1CP58658 441 aa9.04□□□□□ -0.96
UBFD1-204ENST00000565634 PADI6Q6TGC4 694 aa9.04□□□□□ -0.96
UBFD1-204ENST00000565634 PRDM11Q9NQV5 511 aa9.04□□□□□ -0.96
UBFD1-204ENST00000565634 CCDC144AA2RUR9 1427 aa9.04□□□□□ -0.96
UBFD1-204ENST00000565634 CDC42BPGQ6DT37 1551 aa9.03□□□□□ -0.96
UBFD1-204ENST00000565634 MLLT3P42568 568 aaPredicted RBP9.03□□□□□ -0.96
UBFD1-204ENST00000565634 APLP1P51693 650 aa9.03□□□□□ -0.96
UBFD1-204ENST00000565634 MTRQ99707 1265 aa9.03□□□□□ -0.96
UBFD1-204ENST00000565634 SHANK3Q9BYB0 1731 aa9.02□□□□□ -0.96
UBFD1-204ENST00000565634 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.97
UBFD1-204ENST00000565634 COL13A1Q5TAT6 717 aaPredicted RBP9.02□□□□□ -0.97
UBFD1-204ENST00000565634 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
UBFD1-204ENST00000565634 ZNF516Q92618 1163 aa9.02□□□□□ -0.97
UBFD1-204ENST00000565634 MPHOSPH9Q99550 1183 aa9.02□□□□□ -0.97
UBFD1-204ENST00000565634 IFT172Q9UG01 1749 aa9.02□□□□□ -0.97
UBFD1-204ENST00000565634 ADGRF5Q8IZF2 1346 aa9.02□□□□□ -0.97
UBFD1-204ENST00000565634 KIF1AQ12756 1690 aa9.01□□□□□ -0.97
UBFD1-204ENST00000565634 RGL3Q3MIN7 710 aa9.01□□□□□ -0.97
UBFD1-204ENST00000565634 ARXQ96QS3 562 aa9.01□□□□□ -0.97
UBFD1-204ENST00000565634 PPLO60437 1756 aa9□□□□□ -0.97
UBFD1-204ENST00000565634 HSPA6P17066 643 aa9□□□□□ -0.97
UBFD1-204ENST00000565634 SWT1Q5T5J6 900 aaKnown RBP9□□□□□ -0.97
UBFD1-204ENST00000565634 ARHGEF1Q92888 912 aaKnown RBP9□□□□□ -0.97
UBFD1-204ENST00000565634 EYA1Q99502 592 aa9□□□□□ -0.97
UBFD1-204ENST00000565634 IL21Q9HBE4 155 aa9□□□□□ -0.97
UBFD1-204ENST00000565634 SBNO1A3KN83 1393 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 RNF40O75150 1001 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 NLGN2Q8NFZ4 835 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 KCNV2Q8TDN2 545 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
UBFD1-204ENST00000565634 STK32BQ9NY57 414 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 ARHGEF10O15013 1369 aa8.99□□□□□ -0.97
UBFD1-204ENST00000565634 GOLGB1Q14789 3259 aaKnown RBP8.98□□□□□ -0.97
UBFD1-204ENST00000565634 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
UBFD1-204ENST00000565634 ZBTB7CA1YPR0 619 aa8.98□□□□□ -0.97
UBFD1-204ENST00000565634 SLC15A2Q16348 729 aa8.98□□□□□ -0.97
UBFD1-204ENST00000565634 PPP1R18Q6NYC8 613 aa8.98□□□□□ -0.97
UBFD1-204ENST00000565634 SIN3AQ96ST3 1273 aa8.98□□□□□ -0.97
UBFD1-204ENST00000565634 NRXN1Q9ULB1 1477 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 DLC1Q96QB1 1528 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 PLSCR1O15162 318 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 YBX3P16989 372 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBFD1-204ENST00000565634 TXNRD1Q16881 649 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 MTFR1LQ9H019 292 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 ALS2Q96Q42 1657 aa8.97□□□□□ -0.97
UBFD1-204ENST00000565634 DHX57Q6P158 1386 aaKnown RBP8.97□□□□□ -0.97
UBFD1-204ENST00000565634 HTRA3P83110 453 aa8.96□□□□□ -0.98
UBFD1-204ENST00000565634 Q6ZNB5 142 aa8.96□□□□□ -0.98
UBFD1-204ENST00000565634 BARGINQ6ZT62 677 aa8.96□□□□□ -0.98
UBFD1-204ENST00000565634 TCP11L2Q8N4U5 519 aa8.96□□□□□ -0.98
UBFD1-204ENST00000565634 CRYBG1Q9Y4K1 1723 aa8.96□□□□□ -0.98
UBFD1-204ENST00000565634 GPBP1L1Q9HC44 474 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms