RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 NLGN2Q8NFZ4 835 aa22.84■■□□□ 1.25
CCNF-203ENST00000564236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.83■■□□□ 1.25
CCNF-203ENST00000564236 CD2APQ9Y5K6 639 aa22.83■■□□□ 1.25
CCNF-203ENST00000564236 GPR162Q16538 588 aa22.82■■□□□ 1.24
CCNF-203ENST00000564236 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
CCNF-203ENST00000564236 AEBP1Q8IUX7 1158 aa22.82■■□□□ 1.24
CCNF-203ENST00000564236 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
CCNF-203ENST00000564236 NPC1L1Q9UHC9 1359 aa22.81■■□□□ 1.24
CCNF-203ENST00000564236 ATP6V1AP38606 617 aa22.81■■□□□ 1.24
CCNF-203ENST00000564236 ZNF530Q6P9A1 599 aaPredicted RBP22.81■■□□□ 1.24
CCNF-203ENST00000564236 SULT6B1Q6IMI4 303 aa22.8■■□□□ 1.24
CCNF-203ENST00000564236 KLHL34Q8N239 644 aa22.79■■□□□ 1.24
CCNF-203ENST00000564236 SLC4A9Q96Q91 983 aa22.79■■□□□ 1.24
CCNF-203ENST00000564236 RC3H1Q5TC82 1133 aaKnown RBP22.78■■□□□ 1.24
CCNF-203ENST00000564236 CHD4Q14839 1912 aa22.78■■□□□ 1.24
CCNF-203ENST00000564236 GNPATO15228 680 aa22.76■■□□□ 1.23
CCNF-203ENST00000564236 PHF14O94880 888 aa22.76■■□□□ 1.23
CCNF-203ENST00000564236 MTHFSP49914 203 aa22.76■■□□□ 1.23
CCNF-203ENST00000564236 C1orf141Q5JVX7 400 aa22.76■■□□□ 1.23
CCNF-203ENST00000564236 CNTNAP4Q9C0A0 1308 aa22.76■■□□□ 1.23
CCNF-203ENST00000564236 GRIN3BO60391 1043 aa22.75■■□□□ 1.23
CCNF-203ENST00000564236 CABP4P57796 275 aa22.75■■□□□ 1.23
CCNF-203ENST00000564236 SMIM5Q71RC9 77 aa22.75■■□□□ 1.23
CCNF-203ENST00000564236 CICQ96RK0 1608 aaPredicted RBP22.75■■□□□ 1.23
CCNF-203ENST00000564236 YBX3P16989 372 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCNF-203ENST00000564236 ADRA2BP18089 450 aa22.74■■□□□ 1.23
CCNF-203ENST00000564236 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
CCNF-203ENST00000564236 COL5A3P25940 1745 aaPredicted RBP22.73■■□□□ 1.23
CCNF-203ENST00000564236 RTCBQ9Y3I0 505 aaKnown RBP22.72■■□□□ 1.23
CCNF-203ENST00000564236 MRC1P22897 1456 aa22.71■■□□□ 1.23
CCNF-203ENST00000564236 RPS6KA4O75676 772 aa22.7■■□□□ 1.22
CCNF-203ENST00000564236 NFATC2IPQ8NCF5 419 aa22.7■■□□□ 1.22
CCNF-203ENST00000564236 RBM42Q9BTD8 480 aaKnown RBP22.7■■□□□ 1.22
CCNF-203ENST00000564236 COL3A1P02461 1466 aaPredicted RBP22.69■■□□□ 1.22
CCNF-203ENST00000564236 TRAPPC3LQ5T215 181 aa22.69■■□□□ 1.22
CCNF-203ENST00000564236 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
CCNF-203ENST00000564236 DIAPH1O60610 1272 aaKnown RBP22.68■■□□□ 1.22
CCNF-203ENST00000564236 PELP1Q8IZL8 1130 aaKnown RBP22.68■■□□□ 1.22
CCNF-203ENST00000564236 CC2D1BQ5T0F9 858 aaKnown RBP22.67■■□□□ 1.22
CCNF-203ENST00000564236 NLGN1Q8N2Q7 840 aa22.67■■□□□ 1.22
CCNF-203ENST00000564236 ARHGEF1Q92888 912 aaKnown RBP22.67■■□□□ 1.22
CCNF-203ENST00000564236 SLC52A2Q9HAB3 445 aa22.67■■□□□ 1.22
CCNF-203ENST00000564236 SCN11AQ9UI33 1791 aa22.67■■□□□ 1.22
CCNF-203ENST00000564236 MMP10P09238 476 aa22.65■■□□□ 1.22
CCNF-203ENST00000564236 PTCD1O75127 700 aaKnown RBP22.64■■□□□ 1.21
CCNF-203ENST00000564236 HMOX1P09601 288 aa22.64■■□□□ 1.21
CCNF-203ENST00000564236 GYS1P13807 737 aa22.64■■□□□ 1.21
CCNF-203ENST00000564236 TJP1Q07157 1748 aa22.63■■□□□ 1.21
CCNF-203ENST00000564236 RNMTO43148 476 aaKnown RBP22.63■■□□□ 1.21
CCNF-203ENST00000564236 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
CCNF-203ENST00000564236 MTHFSDQ2M296 383 aaKnown RBP22.63■■□□□ 1.21
CCNF-203ENST00000564236 LGR6Q9HBX8 967 aa22.63■■□□□ 1.21
CCNF-203ENST00000564236 C10orf71Q711Q0 1435 aa22.62■■□□□ 1.21
CCNF-203ENST00000564236 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
CCNF-203ENST00000564236 RFC4P35249 363 aa22.61■■□□□ 1.21
CCNF-203ENST00000564236 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
CCNF-203ENST00000564236 PXDNLA1KZ92 1463 aa22.6■■□□□ 1.21
CCNF-203ENST00000564236 TGFB2P61812 414 aa22.6■■□□□ 1.21
CCNF-203ENST00000564236 ADCY9O60503 1353 aa22.6■■□□□ 1.21
CCNF-203ENST00000564236 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
CCNF-203ENST00000564236 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
CCNF-203ENST00000564236 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
CCNF-203ENST00000564236 USP42Q9H9J4 1324 aaKnown RBP22.58■■□□□ 1.21
CCNF-203ENST00000564236 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.21
CCNF-203ENST00000564236 VSIG10Q8N0Z9 540 aa22.58■■□□□ 1.21
CCNF-203ENST00000564236 C1QTNF8P60827 252 aa22.57■■□□□ 1.2
CCNF-203ENST00000564236 CYP19A1P11511 503 aaPredicted RBP22.55■■□□□ 1.2
CCNF-203ENST00000564236 DNAJC10Q8IXB1 793 aa22.55■■□□□ 1.2
CCNF-203ENST00000564236 CCDC87Q9NVE4 849 aa22.55■■□□□ 1.2
CCNF-203ENST00000564236 SOS1Q07889 1333 aaPredicted RBP22.55■■□□□ 1.2
CCNF-203ENST00000564236 GAS2L2Q8NHY3 880 aa22.54■■□□□ 1.2
CCNF-203ENST00000564236 PARP3Q9Y6F1 533 aa22.54■■□□□ 1.2
CCNF-203ENST00000564236 SLC39A6Q13433 755 aa22.53■■□□□ 1.2
CCNF-203ENST00000564236 ATP10DQ9P241 1426 aa22.53■■□□□ 1.2
CCNF-203ENST00000564236 GIGYF1O75420 1035 aaPredicted RBP22.52■■□□□ 1.2
CCNF-203ENST00000564236 FKBP8Q14318 412 aa22.52■■□□□ 1.2
CCNF-203ENST00000564236 UBR2Q8IWV8 1755 aa22.52■■□□□ 1.2
CCNF-203ENST00000564236 CEMIPQ8WUJ3 1361 aa22.51■■□□□ 1.19
CCNF-203ENST00000564236 U2SURPO15042 1029 aaKnown RBP22.51■■□□□ 1.19
CCNF-203ENST00000564236 SRP68Q9UHB9 627 aaKnown RBP22.51■■□□□ 1.19
CCNF-203ENST00000564236 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
CCNF-203ENST00000564236 TM4SF1P30408 202 aa22.5■■□□□ 1.19
CCNF-203ENST00000564236 IL17REQ8NFR9 667 aa22.5■■□□□ 1.19
CCNF-203ENST00000564236 DDR1Q08345 913 aa22.49■■□□□ 1.19
CCNF-203ENST00000564236 CFAP53Q96M91 514 aa22.49■■□□□ 1.19
CCNF-203ENST00000564236 RSPH6AQ9H0K4 717 aa22.49■■□□□ 1.19
CCNF-203ENST00000564236 A0A0G2JLW4 131 aa22.48■■□□□ 1.19
CCNF-203ENST00000564236 KCNA3P22001 575 aa22.48■■□□□ 1.19
CCNF-203ENST00000564236 COL15A1P39059 1388 aa22.48■■□□□ 1.19
CCNF-203ENST00000564236 VIRMAQ69YN4 1812 aaKnown RBP22.47■■□□□ 1.19
CCNF-203ENST00000564236 POLRMTO00411 1230 aaKnown RBP22.47■■□□□ 1.19
CCNF-203ENST00000564236 DPEP1P16444 411 aa22.47■■□□□ 1.19
CCNF-203ENST00000564236 NARFQ9UHQ1 456 aa22.47■■□□□ 1.19
CCNF-203ENST00000564236 ZBTB1Q9Y2K1 713 aa22.47■■□□□ 1.19
CCNF-203ENST00000564236 PPP2R1AP30153 589 aa22.46■■□□□ 1.19
CCNF-203ENST00000564236 ZNF790Q6PG37 636 aa22.46■■□□□ 1.19
CCNF-203ENST00000564236 SIPA1L3O60292 1781 aaPredicted RBP22.45■■□□□ 1.19
CCNF-203ENST00000564236 ZPR1O75312 459 aa22.45■■□□□ 1.18
CCNF-203ENST00000564236 TEFQ10587 303 aa22.45■■□□□ 1.18
CCNF-203ENST00000564236 USPL1Q5W0Q7 1092 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms