RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 KRT76Q01546 638 aa12.43□□□□□ -0.42
AC027458.1-201ENST00000563639 TLR1Q15399 786 aa12.43□□□□□ -0.42
AC027458.1-201ENST00000563639 USP17L2Q6R6M4 530 aa12.43□□□□□ -0.42
AC027458.1-201ENST00000563639 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
AC027458.1-201ENST00000563639 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
AC027458.1-201ENST00000563639 SV2AQ7L0J3 742 aa12.42□□□□□ -0.42
AC027458.1-201ENST00000563639 TIMMDC1Q9NPL8 285 aa12.42□□□□□ -0.42
AC027458.1-201ENST00000563639 PHKA2P46019 1235 aa12.41□□□□□ -0.42
AC027458.1-201ENST00000563639 C4orf17Q53FE4 359 aa12.41□□□□□ -0.42
AC027458.1-201ENST00000563639 TMEM214Q6NUQ4 689 aaKnown RBP12.41□□□□□ -0.42
AC027458.1-201ENST00000563639 PPARGC1BQ86YN6 1023 aaKnown RBP12.41□□□□□ -0.42
AC027458.1-201ENST00000563639 ZNF837Q96EG3 531 aaPredicted RBP12.4□□□□□ -0.42
AC027458.1-201ENST00000563639 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
AC027458.1-201ENST00000563639 COL25A1Q9BXS0 654 aaPredicted RBP12.4□□□□□ -0.42
AC027458.1-201ENST00000563639 SERTAD1Q9UHV2 236 aa12.4□□□□□ -0.42
AC027458.1-201ENST00000563639 DBN1Q16643 649 aa12.39□□□□□ -0.43
AC027458.1-201ENST00000563639 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
AC027458.1-201ENST00000563639 RNFT1Q5M7Z0 435 aa12.39□□□□□ -0.43
AC027458.1-201ENST00000563639 RIPOR1Q6ZS17 1223 aa12.39□□□□□ -0.43
AC027458.1-201ENST00000563639 TRIM22Q8IYM9 498 aa12.39□□□□□ -0.43
AC027458.1-201ENST00000563639 SMTNP53814 917 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 RHBDD1Q8TEB9 315 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 CNTNAP3BQ96NU0 1288 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 CNTNAP3Q9BZ76 1288 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 KIAA1024Q9UPX6 916 aa12.38□□□□□ -0.43
AC027458.1-201ENST00000563639 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
AC027458.1-201ENST00000563639 CLDN10P78369 228 aa12.37□□□□□ -0.43
AC027458.1-201ENST00000563639 PSME1Q06323 249 aa12.37□□□□□ -0.43
AC027458.1-201ENST00000563639 ZSCAN1Q8NBB4 408 aa12.37□□□□□ -0.43
AC027458.1-201ENST00000563639 TFIP11Q9UBB9 837 aaKnown RBP12.37□□□□□ -0.43
AC027458.1-201ENST00000563639 ZBTB7BO15156 539 aaPredicted RBP12.36□□□□□ -0.43
AC027458.1-201ENST00000563639 F11P03951 625 aa12.36□□□□□ -0.43
AC027458.1-201ENST00000563639 MTFR1Q15390 333 aa12.36□□□□□ -0.43
AC027458.1-201ENST00000563639 A0A1B0GTH6 734 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 TRIM50Q86XT4 487 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 ZNF295-AS1Q8N0V1 137 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 GMCL1Q96IK5 515 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 ZNF358Q9NW07 568 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 IQSEC3Q9UPP2 1182 aaPredicted RBP12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 USP3Q9Y6I4 520 aa12.35□□□□□ -0.43
AC027458.1-201ENST00000563639 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
AC027458.1-201ENST00000563639 A6NJY4 79 aa12.34□□□□□ -0.43
AC027458.1-201ENST00000563639 STK17AQ9UEE5 414 aa12.34□□□□□ -0.43
AC027458.1-201ENST00000563639 MKRN1Q9UHC7 482 aaKnown RBP12.34□□□□□ -0.43
AC027458.1-201ENST00000563639 H7C1W4 665 aa12.33□□□□□ -0.44
AC027458.1-201ENST00000563639 THBS1P07996 1170 aa12.33□□□□□ -0.44
AC027458.1-201ENST00000563639 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
AC027458.1-201ENST00000563639 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
AC027458.1-201ENST00000563639 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
AC027458.1-201ENST00000563639 GPR25O00155 361 aa12.32□□□□□ -0.44
AC027458.1-201ENST00000563639 GAS6Q14393 721 aa12.32□□□□□ -0.44
AC027458.1-201ENST00000563639 OGFOD1Q8N543 542 aa12.32□□□□□ -0.44
AC027458.1-201ENST00000563639 TPCN2Q8NHX9 752 aa12.32□□□□□ -0.44
AC027458.1-201ENST00000563639 CDK2AP1O14519 115 aa12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 BACH1O14867 736 aa12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 MSX1P28360 303 aa12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 PLA2G4AP47712 749 aa12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 ATP1A2P50993 1020 aa12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 GTPBP3Q969Y2 492 aaKnown RBP12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 NIFKQ9BYG3 293 aaKnown RBP12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 DNAAF2Q9NVR5 837 aaKnown RBP12.31□□□□□ -0.44
AC027458.1-201ENST00000563639 EPHA4P54764 986 aa12.3□□□□□ -0.44
AC027458.1-201ENST00000563639 CCDC102BQ68D86 513 aa12.3□□□□□ -0.44
AC027458.1-201ENST00000563639 NUCKS1Q9H1E3 243 aaKnown RBP12.3□□□□□ -0.44
AC027458.1-201ENST00000563639 SCHIP1Q9P0W5 487 aaPredicted RBP12.29□□□□□ -0.44
AC027458.1-201ENST00000563639 GTF3C3Q9Y5Q9 886 aa12.29□□□□□ -0.44
AC027458.1-201ENST00000563639 DKK1O94907 266 aa12.28□□□□□ -0.44
AC027458.1-201ENST00000563639 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
AC027458.1-201ENST00000563639 RUBCNLQ9H714 662 aa12.28□□□□□ -0.44
AC027458.1-201ENST00000563639 FOXK2Q01167 660 aa12.27□□□□□ -0.45
AC027458.1-201ENST00000563639 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
AC027458.1-201ENST00000563639 SIX5Q8N196 739 aa12.27□□□□□ -0.45
AC027458.1-201ENST00000563639 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.45
AC027458.1-201ENST00000563639 ATP4AP20648 1035 aa12.26□□□□□ -0.45
AC027458.1-201ENST00000563639 UBAP2LQ14157 1087 aaKnown RBP12.26□□□□□ -0.45
AC027458.1-201ENST00000563639 FOXR1Q6PIV2 292 aa12.26□□□□□ -0.45
AC027458.1-201ENST00000563639 SLURP2P0DP57 97 aa12.25□□□□□ -0.45
AC027458.1-201ENST00000563639 RASA1P20936 1047 aa12.25□□□□□ -0.45
AC027458.1-201ENST00000563639 KANK4Q5T7N3 995 aaPredicted RBP12.25□□□□□ -0.45
AC027458.1-201ENST00000563639 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
AC027458.1-201ENST00000563639 CABP1Q9NZU7 370 aa12.25□□□□□ -0.45
AC027458.1-201ENST00000563639 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
AC027458.1-201ENST00000563639 CRISPLD1Q9H336 500 aa12.24□□□□□ -0.45
AC027458.1-201ENST00000563639 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 LMOD1P29536 600 aaPredicted RBP12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 LBRQ14739 615 aaKnown RBP12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 SLC9A9Q8IVB4 645 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 PGBD3Q8N328 593 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 ZDHHC1Q8WTX9 485 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 TRERF1Q96PN7 1200 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 PARP3Q9Y6F1 533 aa12.23□□□□□ -0.45
AC027458.1-201ENST00000563639 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
AC027458.1-201ENST00000563639 ADAMTS2O95450 1211 aa12.22□□□□□ -0.45
AC027458.1-201ENST00000563639 SRSF11Q05519 484 aaKnown RBP12.22□□□□□ -0.45
AC027458.1-201ENST00000563639 CRTC2Q53ET0 693 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms