RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
ABCD1P3-201ENST00000562927 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
ABCD1P3-201ENST00000562927 PHF14O94880 888 aa17.26■□□□□ 0.35
ABCD1P3-201ENST00000562927 TAF1LQ8IZX4 1826 aa17.26■□□□□ 0.35
ABCD1P3-201ENST00000562927 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
ABCD1P3-201ENST00000562927 YBX3P16989 372 aaKnown RBP eCLIP17.25■□□□□ 0.35
ABCD1P3-201ENST00000562927 GNPATO15228 680 aa17.24■□□□□ 0.35
ABCD1P3-201ENST00000562927 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
ABCD1P3-201ENST00000562927 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
ABCD1P3-201ENST00000562927 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
ABCD1P3-201ENST00000562927 IL13P35225 146 aa17.23■□□□□ 0.35
ABCD1P3-201ENST00000562927 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
ABCD1P3-201ENST00000562927 KDRP35968 1356 aa17.23■□□□□ 0.35
ABCD1P3-201ENST00000562927 KIF7Q2M1P5 1343 aa17.22■□□□□ 0.35
ABCD1P3-201ENST00000562927 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
ABCD1P3-201ENST00000562927 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
ABCD1P3-201ENST00000562927 MTHFSP49914 203 aa17.21■□□□□ 0.35
ABCD1P3-201ENST00000562927 CABP4P57796 275 aa17.21■□□□□ 0.35
ABCD1P3-201ENST00000562927 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
ABCD1P3-201ENST00000562927 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
ABCD1P3-201ENST00000562927 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
ABCD1P3-201ENST00000562927 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
ABCD1P3-201ENST00000562927 PER1O15534 1290 aaPredicted RBP17.19■□□□□ 0.34
ABCD1P3-201ENST00000562927 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
ABCD1P3-201ENST00000562927 RTCBQ9Y3I0 505 aaKnown RBP17.19■□□□□ 0.34
ABCD1P3-201ENST00000562927 CHD4Q14839 1912 aa17.19■□□□□ 0.34
ABCD1P3-201ENST00000562927 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
ABCD1P3-201ENST00000562927 CNTNAP4Q9C0A0 1308 aa17.17■□□□□ 0.34
ABCD1P3-201ENST00000562927 RPS6KA4O75676 772 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 MMP10P09238 476 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 ADRA2BP18089 450 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 C1QTNF8P60827 252 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
ABCD1P3-201ENST00000562927 PTCD1O75127 700 aaKnown RBP17.15■□□□□ 0.34
ABCD1P3-201ENST00000562927 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
ABCD1P3-201ENST00000562927 GYS1P13807 737 aa17.13■□□□□ 0.33
ABCD1P3-201ENST00000562927 RFC4P35249 363 aa17.12■□□□□ 0.33
ABCD1P3-201ENST00000562927 CC2D1BQ5T0F9 858 aaKnown RBP17.12■□□□□ 0.33
ABCD1P3-201ENST00000562927 LGR6Q9HBX8 967 aa17.12■□□□□ 0.33
ABCD1P3-201ENST00000562927 DIAPH1O60610 1272 aaKnown RBP17.11■□□□□ 0.33
ABCD1P3-201ENST00000562927 GIGYF1O75420 1035 aaPredicted RBP17.11■□□□□ 0.33
ABCD1P3-201ENST00000562927 HMOX1P09601 288 aa17.11■□□□□ 0.33
ABCD1P3-201ENST00000562927 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
ABCD1P3-201ENST00000562927 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
ABCD1P3-201ENST00000562927 TGFB2P61812 414 aa17.1■□□□□ 0.33
ABCD1P3-201ENST00000562927 NPC1L1Q9UHC9 1359 aa17.1■□□□□ 0.33
ABCD1P3-201ENST00000562927 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
ABCD1P3-201ENST00000562927 WWC3Q9ULE0 1092 aa17.09■□□□□ 0.33
ABCD1P3-201ENST00000562927 COL5A3P25940 1745 aaPredicted RBP17.09■□□□□ 0.33
ABCD1P3-201ENST00000562927 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
ABCD1P3-201ENST00000562927 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
ABCD1P3-201ENST00000562927 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
ABCD1P3-201ENST00000562927 PXDNLA1KZ92 1463 aa17.07■□□□□ 0.32
ABCD1P3-201ENST00000562927 C10orf71Q711Q0 1435 aa17.07■□□□□ 0.32
ABCD1P3-201ENST00000562927 ADCY9O60503 1353 aa17.07■□□□□ 0.32
ABCD1P3-201ENST00000562927 SENP3-EIF4A1A0A087X0R7 540 aa17.07■□□□□ 0.32
ABCD1P3-201ENST00000562927 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
ABCD1P3-201ENST00000562927 A0A0G2JLW4 131 aa17.06■□□□□ 0.32
ABCD1P3-201ENST00000562927 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
ABCD1P3-201ENST00000562927 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
ABCD1P3-201ENST00000562927 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
ABCD1P3-201ENST00000562927 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
ABCD1P3-201ENST00000562927 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
ABCD1P3-201ENST00000562927 MRC1P22897 1456 aa17.05■□□□□ 0.32
ABCD1P3-201ENST00000562927 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
ABCD1P3-201ENST00000562927 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
ABCD1P3-201ENST00000562927 FKBP8Q14318 412 aa17.04■□□□□ 0.32
ABCD1P3-201ENST00000562927 GPBP1L1Q9HC44 474 aaPredicted RBP17.04■□□□□ 0.32
ABCD1P3-201ENST00000562927 SCN11AQ9UI33 1791 aa17.03■□□□□ 0.32
ABCD1P3-201ENST00000562927 DPEP1P16444 411 aa17.03■□□□□ 0.32
ABCD1P3-201ENST00000562927 TJP1Q07157 1748 aa17.03■□□□□ 0.32
ABCD1P3-201ENST00000562927 COL3A1P02461 1466 aaPredicted RBP17.03■□□□□ 0.32
ABCD1P3-201ENST00000562927 CEP350Q5VT06 3117 aa17.03■□□□□ 0.32
ABCD1P3-201ENST00000562927 C4AP0C0L4 1744 aa17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 KCNA3P22001 575 aa17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 DDR1Q08345 913 aa17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
ABCD1P3-201ENST00000562927 MYH14Q7Z406 1995 aaKnown RBP17.02■□□□□ 0.31
ABCD1P3-201ENST00000562927 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
ABCD1P3-201ENST00000562927 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
ABCD1P3-201ENST00000562927 TM4SF1P30408 202 aa17.01■□□□□ 0.31
ABCD1P3-201ENST00000562927 KCPQ6ZWJ8 1503 aa17.01■□□□□ 0.31
ABCD1P3-201ENST00000562927 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
ABCD1P3-201ENST00000562927 ZPR1O75312 459 aa17■□□□□ 0.31
ABCD1P3-201ENST00000562927 USPL1Q5W0Q7 1092 aa17■□□□□ 0.31
ABCD1P3-201ENST00000562927 IL17REQ8NFR9 667 aa17■□□□□ 0.31
ABCD1P3-201ENST00000562927 ZNF526Q8TF50 670 aaPredicted RBP17■□□□□ 0.31
ABCD1P3-201ENST00000562927 KIAA1551Q9HCM1 1747 aa17■□□□□ 0.31
ABCD1P3-201ENST00000562927 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
ABCD1P3-201ENST00000562927 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
ABCD1P3-201ENST00000562927 GNAT3A8MTJ3 354 aa16.98■□□□□ 0.31
ABCD1P3-201ENST00000562927 FCHSD2O94868 740 aa16.98■□□□□ 0.31
ABCD1P3-201ENST00000562927 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
ABCD1P3-201ENST00000562927 GAS2L2Q8NHY3 880 aa16.98■□□□□ 0.31
ABCD1P3-201ENST00000562927 PIM2Q9P1W9 311 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms