RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 PLEKHO1Q53GL0 409 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-205ENST00000562707 RTCBQ9Y3I0 505 aaKnown RBP22.78■■□□□ 1.24
CMTM3-205ENST00000562707 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
CMTM3-205ENST00000562707 EIF4G2P78344 907 aaKnown RBP eCLIP22.77■■□□□ 1.24
CMTM3-205ENST00000562707 TRAPPC3LQ5T215 181 aa22.77■■□□□ 1.24
CMTM3-205ENST00000562707 DCAF5Q96JK2 942 aa22.77■■□□□ 1.24
CMTM3-205ENST00000562707 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.24
CMTM3-205ENST00000562707 ITGB4P16144 1822 aa22.77■■□□□ 1.24
CMTM3-205ENST00000562707 MMP10P09238 476 aa22.76■■□□□ 1.23
CMTM3-205ENST00000562707 ZNF526Q8TF50 670 aaPredicted RBP22.76■■□□□ 1.23
CMTM3-205ENST00000562707 PANK3Q9H999 370 aa22.76■■□□□ 1.23
CMTM3-205ENST00000562707 AMOTQ4VCS5 1084 aa22.75■■□□□ 1.23
CMTM3-205ENST00000562707 NLGN1Q8N2Q7 840 aa22.75■■□□□ 1.23
CMTM3-205ENST00000562707 ANKRD26Q9UPS8 1709 aa22.74■■□□□ 1.23
CMTM3-205ENST00000562707 CABP4P57796 275 aa22.74■■□□□ 1.23
CMTM3-205ENST00000562707 RC3H1Q5TC82 1133 aaKnown RBP22.73■■□□□ 1.23
CMTM3-205ENST00000562707 ZNF530Q6P9A1 599 aaPredicted RBP22.73■■□□□ 1.23
CMTM3-205ENST00000562707 HSPA5P11021 654 aaKnown RBP22.72■■□□□ 1.23
CMTM3-205ENST00000562707 ADCY9O60503 1353 aa22.72■■□□□ 1.23
CMTM3-205ENST00000562707 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
CMTM3-205ENST00000562707 ADRA2BP18089 450 aa22.71■■□□□ 1.23
CMTM3-205ENST00000562707 TGFB2P61812 414 aa22.71■■□□□ 1.23
CMTM3-205ENST00000562707 MORC1Q86VD1 984 aa22.71■■□□□ 1.23
CMTM3-205ENST00000562707 ARHGEF1Q92888 912 aaKnown RBP22.71■■□□□ 1.23
CMTM3-205ENST00000562707 SLC4A9Q96Q91 983 aa22.71■■□□□ 1.23
CMTM3-205ENST00000562707 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
CMTM3-205ENST00000562707 RPS6KA4O75676 772 aa22.7■■□□□ 1.22
CMTM3-205ENST00000562707 RFC4P35249 363 aa22.7■■□□□ 1.22
CMTM3-205ENST00000562707 MTHFSP49914 203 aa22.7■■□□□ 1.22
CMTM3-205ENST00000562707 C1orf141Q5JVX7 400 aa22.7■■□□□ 1.22
CMTM3-205ENST00000562707 KDRP35968 1356 aa22.7■■□□□ 1.22
CMTM3-205ENST00000562707 CNTNAP4Q9C0A0 1308 aa22.68■■□□□ 1.22
CMTM3-205ENST00000562707 CCDC87Q9NVE4 849 aa22.68■■□□□ 1.22
CMTM3-205ENST00000562707 BCS1LQ9Y276 419 aa22.67■■□□□ 1.22
CMTM3-205ENST00000562707 PARP3Q9Y6F1 533 aa22.67■■□□□ 1.22
CMTM3-205ENST00000562707 A0A0G2JLW4 131 aa22.66■■□□□ 1.22
CMTM3-205ENST00000562707 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
CMTM3-205ENST00000562707 GYS1P13807 737 aa22.66■■□□□ 1.22
CMTM3-205ENST00000562707 HSPA6P17066 643 aa22.65■■□□□ 1.22
CMTM3-205ENST00000562707 SULT6B1Q6IMI4 303 aa22.65■■□□□ 1.22
CMTM3-205ENST00000562707 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
CMTM3-205ENST00000562707 KNSTRNQ9Y448 316 aa22.65■■□□□ 1.22
CMTM3-205ENST00000562707 NFATC2IPQ8NCF5 419 aa22.64■■□□□ 1.21
CMTM3-205ENST00000562707 PXDNLA1KZ92 1463 aa22.64■■□□□ 1.21
CMTM3-205ENST00000562707 KDM6AO15550 1401 aaPredicted RBP22.64■■□□□ 1.21
CMTM3-205ENST00000562707 ARHGAP27Q6ZUM4 889 aa22.63■■□□□ 1.21
CMTM3-205ENST00000562707 DPEP1P16444 411 aa22.62■■□□□ 1.21
CMTM3-205ENST00000562707 FCHSD2O94868 740 aa22.61■■□□□ 1.21
CMTM3-205ENST00000562707 CRKLP46109 303 aaKnown RBP22.61■■□□□ 1.21
CMTM3-205ENST00000562707 C10orf71Q711Q0 1435 aa22.6■■□□□ 1.21
CMTM3-205ENST00000562707 KIF3CO14782 793 aa22.6■■□□□ 1.21
CMTM3-205ENST00000562707 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
CMTM3-205ENST00000562707 IL13P35225 146 aa22.59■■□□□ 1.21
CMTM3-205ENST00000562707 SRP68Q9UHB9 627 aaKnown RBP22.57■■□□□ 1.2
CMTM3-205ENST00000562707 ZNF831Q5JPB2 1677 aa22.57■■□□□ 1.2
CMTM3-205ENST00000562707 AKAP4Q5JQC9 854 aa22.56■■□□□ 1.2
CMTM3-205ENST00000562707 CCER1Q8TC90 406 aaPredicted RBP22.56■■□□□ 1.2
CMTM3-205ENST00000562707 PIM2Q9P1W9 311 aa22.56■■□□□ 1.2
CMTM3-205ENST00000562707 FKBP8Q14318 412 aa22.55■■□□□ 1.2
CMTM3-205ENST00000562707 USP42Q9H9J4 1324 aaKnown RBP22.55■■□□□ 1.2
CMTM3-205ENST00000562707 KCNA3P22001 575 aa22.54■■□□□ 1.2
CMTM3-205ENST00000562707 IFFO2Q5TF58 517 aa22.54■■□□□ 1.2
CMTM3-205ENST00000562707 INTS5Q6P9B9 1019 aaKnown RBP22.54■■□□□ 1.2
CMTM3-205ENST00000562707 CEP350Q5VT06 3117 aa22.53■■□□□ 1.2
CMTM3-205ENST00000562707 TOMM70O94826 608 aa22.53■■□□□ 1.2
CMTM3-205ENST00000562707 SLC52A2Q9HAB3 445 aa22.53■■□□□ 1.2
CMTM3-205ENST00000562707 ZPR1O75312 459 aa22.52■■□□□ 1.2
CMTM3-205ENST00000562707 DALRD3Q5D0E6 543 aaKnown RBP22.52■■□□□ 1.2
CMTM3-205ENST00000562707 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
CMTM3-205ENST00000562707 DDR1Q08345 913 aa22.51■■□□□ 1.19
CMTM3-205ENST00000562707 AMER1Q5JTC6 1135 aaPredicted RBP22.51■■□□□ 1.19
CMTM3-205ENST00000562707 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
CMTM3-205ENST00000562707 DNAJC10Q8IXB1 793 aa22.51■■□□□ 1.19
CMTM3-205ENST00000562707 LGR6Q9HBX8 967 aa22.51■■□□□ 1.19
CMTM3-205ENST00000562707 COL5A3P25940 1745 aaPredicted RBP22.49■■□□□ 1.19
CMTM3-205ENST00000562707 RNMTO43148 476 aaKnown RBP22.49■■□□□ 1.19
CMTM3-205ENST00000562707 HMOX1P09601 288 aa22.49■■□□□ 1.19
CMTM3-205ENST00000562707 TM4SF1P30408 202 aa22.49■■□□□ 1.19
CMTM3-205ENST00000562707 APLP1P51693 650 aa22.49■■□□□ 1.19
CMTM3-205ENST00000562707 KIF13BQ9NQT8 1826 aa22.49■■□□□ 1.19
CMTM3-205ENST00000562707 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
CMTM3-205ENST00000562707 NMRK2Q9NPI5 230 aa22.48■■□□□ 1.19
CMTM3-205ENST00000562707 POLRMTO00411 1230 aaKnown RBP22.47■■□□□ 1.19
CMTM3-205ENST00000562707 CYP19A1P11511 503 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-205ENST00000562707 CHRNA5P30532 468 aa22.47■■□□□ 1.19
CMTM3-205ENST00000562707 SLC39A6Q13433 755 aa22.47■■□□□ 1.19
CMTM3-205ENST00000562707 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
CMTM3-205ENST00000562707 KIAA1551Q9HCM1 1747 aa22.46■■□□□ 1.19
CMTM3-205ENST00000562707 C16orf71Q8IYS4 520 aaPredicted RBP22.46■■□□□ 1.19
CMTM3-205ENST00000562707 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
CMTM3-205ENST00000562707 DIAPH1O60610 1272 aaKnown RBP22.45■■□□□ 1.18
CMTM3-205ENST00000562707 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
CMTM3-205ENST00000562707 KIF7Q2M1P5 1343 aa22.44■■□□□ 1.18
CMTM3-205ENST00000562707 MTHFSDQ2M296 383 aaKnown RBP22.44■■□□□ 1.18
CMTM3-205ENST00000562707 RNF181Q9P0P0 153 aa22.44■■□□□ 1.18
CMTM3-205ENST00000562707 MYH14Q7Z406 1995 aaKnown RBP22.43■■□□□ 1.18
CMTM3-205ENST00000562707 KDM2BQ8NHM5 1336 aa22.43■■□□□ 1.18
CMTM3-205ENST00000562707 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
CMTM3-205ENST00000562707 CC2D1BQ5T0F9 858 aaKnown RBP22.42■■□□□ 1.18
CMTM3-205ENST00000562707 RBM46Q8TBY0 533 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms