RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 TRIM34Q9BYJ4 488 aa7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 GPBP1L1Q9HC44 474 aaPredicted RBP7.9□□□□□ -1.14
HDGFL3-202ENST00000562702 KRBA1A5PL33 1030 aa7.89□□□□□ -1.15
HDGFL3-202ENST00000562702 GNASQ5JWF2 1037 aa7.89□□□□□ -1.15
HDGFL3-202ENST00000562702 EDARADDQ8WWZ3 215 aa7.89□□□□□ -1.15
HDGFL3-202ENST00000562702 PCMTD1Q96MG8 357 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-202ENST00000562702 GPAMQ9HCL2 828 aa7.89□□□□□ -1.15
HDGFL3-202ENST00000562702 MYCP01106 439 aaPredicted RBP7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 EFHC2Q5JST6 749 aa7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 CNKSR1Q969H4 720 aa7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 ESYT1Q9BSJ8 1104 aa7.88□□□□□ -1.15
HDGFL3-202ENST00000562702 BMP4P12644 408 aa7.87□□□□□ -1.15
HDGFL3-202ENST00000562702 NR1H3Q13133 447 aa7.87□□□□□ -1.15
HDGFL3-202ENST00000562702 TMEM214Q6NUQ4 689 aaKnown RBP7.87□□□□□ -1.15
HDGFL3-202ENST00000562702 OSBPL3Q9H4L5 887 aa7.87□□□□□ -1.15
HDGFL3-202ENST00000562702 ATXN7L1Q9ULK2 861 aaPredicted RBP7.87□□□□□ -1.15
HDGFL3-202ENST00000562702 SHISA8B8ZZ34 492 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 TRAK2O60296 914 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 FURINP09958 794 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 PHKA2P46019 1235 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 SCTRP47872 440 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 CENPCQ03188 943 aa7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 NOP53Q9NZM5 478 aaKnown RBP7.86□□□□□ -1.15
HDGFL3-202ENST00000562702 GNB5O14775 395 aa7.85□□□□□ -1.15
HDGFL3-202ENST00000562702 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
HDGFL3-202ENST00000562702 Q8N3U1 123 aa7.85□□□□□ -1.15
HDGFL3-202ENST00000562702 GOPCQ9HD26 462 aa7.85□□□□□ -1.15
HDGFL3-202ENST00000562702 RAB6BQ9NRW1 208 aa7.85□□□□□ -1.15
HDGFL3-202ENST00000562702 SLCO4C1Q6ZQN7 724 aa7.84□□□□□ -1.15
HDGFL3-202ENST00000562702 APBB1O00213 710 aa7.83□□□□□ -1.16
HDGFL3-202ENST00000562702 COL8A1P27658 744 aa7.83□□□□□ -1.16
HDGFL3-202ENST00000562702 FGFR3P22607 806 aa7.82□□□□□ -1.16
HDGFL3-202ENST00000562702 FIGNL1Q6PIW4 674 aa7.82□□□□□ -1.16
HDGFL3-202ENST00000562702 RUBCNLQ9H714 662 aa7.82□□□□□ -1.16
HDGFL3-202ENST00000562702 IL2RAP01589 272 aa7.81□□□□□ -1.16
HDGFL3-202ENST00000562702 C1orf229Q6ZS94 237 aaPredicted RBP7.81□□□□□ -1.16
HDGFL3-202ENST00000562702 GJD4Q96KN9 370 aaPredicted RBP7.81□□□□□ -1.16
HDGFL3-202ENST00000562702 GGA1Q9UJY5 639 aa7.81□□□□□ -1.16
HDGFL3-202ENST00000562702 MSX1P28360 303 aa7.8□□□□□ -1.16
HDGFL3-202ENST00000562702 ABHD17AQ96GS6 310 aa7.8□□□□□ -1.16
HDGFL3-202ENST00000562702 XAGE2Q96GT9 111 aa7.8□□□□□ -1.16
HDGFL3-202ENST00000562702 C1QTNF9BB2RNN3 333 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 THBS1P07996 1170 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 EPXP11678 715 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 C4orf17Q53FE4 359 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 LINC00114Q6XXX2 140 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 RHBDD1Q8TEB9 315 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 BTBD6Q96KE9 485 aa7.79□□□□□ -1.16
HDGFL3-202ENST00000562702 ARAFP10398 606 aa7.78□□□□□ -1.16
HDGFL3-202ENST00000562702 SUV39H2Q9H5I1 410 aa7.78□□□□□ -1.16
HDGFL3-202ENST00000562702 NDUFB9Q9Y6M9 179 aa7.78□□□□□ -1.16
HDGFL3-202ENST00000562702 USP4Q13107 963 aa7.77□□□□□ -1.17
HDGFL3-202ENST00000562702 TBC1D9Q6ZT07 1266 aa7.77□□□□□ -1.17
HDGFL3-202ENST00000562702 RNF135Q8IUD6 432 aa7.77□□□□□ -1.17
HDGFL3-202ENST00000562702 CRISPLD1Q9H336 500 aa7.77□□□□□ -1.17
HDGFL3-202ENST00000562702 BNIP3LO60238 219 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 CTBSQ01459 385 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 UBAP2LQ14157 1087 aaKnown RBP7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 CD163Q86VB7 1156 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 C1orf216Q8TAB5 229 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 SIRT1Q96EB6 747 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 FHDC1Q9C0D6 1143 aaPredicted RBP7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 PCDHGC4Q9Y5F7 938 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 HRH3Q9Y5N1 445 aa7.76□□□□□ -1.17
HDGFL3-202ENST00000562702 NEURL1BA8MQ27 555 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 SOCS7O14512 581 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 C2CD2LO14523 706 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 ADH6P28332 368 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 TLR1Q15399 786 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 PPARGC1BQ86YN6 1023 aaKnown RBP7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 BANK1Q8NDB2 785 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 NDFIP2Q9NV92 336 aa7.75□□□□□ -1.17
HDGFL3-202ENST00000562702 DGKGP49619 791 aa7.74□□□□□ -1.17
HDGFL3-202ENST00000562702 NLRP8Q86W28 1048 aa7.74□□□□□ -1.17
HDGFL3-202ENST00000562702 PSMG3-AS1Q96PY0 264 aa7.74□□□□□ -1.17
HDGFL3-202ENST00000562702 CEP126Q9P2H0 1117 aa7.74□□□□□ -1.17
HDGFL3-202ENST00000562702 HOXB4P17483 251 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 CHSY3Q70JA7 882 aa7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 KRTAP4-8Q9BYQ9 185 aa7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 SEMA6BQ9H3T3 888 aa7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 AVENQ9NQS1 362 aaPredicted RBP7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 DOLKQ9UPQ8 538 aa7.73□□□□□ -1.17
HDGFL3-202ENST00000562702 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 CHRNA4P43681 627 aa7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 GATA4P43694 442 aa7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 PLA2G4AP47712 749 aa7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 CCDC85AQ96PX6 553 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 CDCA7Q9BWT1 371 aaPredicted RBP7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 ZCCHC2Q9C0B9 1178 aaKnown RBP7.72□□□□□ -1.17
HDGFL3-202ENST00000562702 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 EIF4G2P78344 907 aaKnown RBP eCLIP7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 DOC2BQ14184 412 aa7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 SLFNL1Q499Z3 407 aa7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 ZMYM1Q5SVZ6 1142 aa7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 AIDAQ96BJ3 306 aa7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 NIFKQ9BYG3 293 aaKnown RBP7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 PRM3Q9NNZ6 103 aa7.71□□□□□ -1.18
HDGFL3-202ENST00000562702 PRR12Q9ULL5 1215 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms