RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 GMCL1Q96IK5 515 aa6.13□□□□□ -1.43
HMGB3P26-201ENST00000560051 PRDM16Q9HAZ2 1276 aa6.13□□□□□ -1.43
HMGB3P26-201ENST00000560051 A0A0U1RQG5 324 aaPredicted RBP6.12□□□□□ -1.43
HMGB3P26-201ENST00000560051 PTGIRP43119 386 aa6.12□□□□□ -1.43
HMGB3P26-201ENST00000560051 NEDD1Q8NHV4 660 aa6.12□□□□□ -1.43
HMGB3P26-201ENST00000560051 LRRN4Q8WUT4 740 aa6.12□□□□□ -1.43
HMGB3P26-201ENST00000560051 LYPD4Q6UWN0 246 aa6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 BEND7Q8N7W2 519 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 GPATCH11Q8N954 259 aa6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 ZNF784Q8NCA9 323 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 TMPRSS4Q9NRS4 437 aa6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 IGSF5Q9NSI5 407 aa6.11□□□□□ -1.43
HMGB3P26-201ENST00000560051 UNCXA6NJT0 531 aa6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 H7C1W4 665 aa6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 MSTNO14793 375 aa6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 AP1G2O75843 785 aa6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 CELA2BP08218 269 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 PRICKLE2Q7Z3G6 844 aa6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 PROSER2Q86WR7 435 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 FNBP4Q8N3X1 1017 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 NSFL1CQ9UNZ2 370 aaKnown RBP6.1□□□□□ -1.43
HMGB3P26-201ENST00000560051 SENP3-EIF4A1A0A087X0R7 540 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 ERVH48-1M5A8F1 160 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 PPP2R2DQ66LE6 453 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 RIPOR1Q6ZS17 1223 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 ZNF526Q8TF50 670 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 TRERF1Q96PN7 1200 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 MYH16Q9H6N6 1097 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 MBIPQ9NS73 344 aa6.09□□□□□ -1.43
HMGB3P26-201ENST00000560051 RBM10P98175 930 aaKnown RBP6.08□□□□□ -1.44
HMGB3P26-201ENST00000560051 TMED8Q6PL24 325 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P26-201ENST00000560051 SEPT12Q8IYM1 358 aa6.08□□□□□ -1.44
HMGB3P26-201ENST00000560051 GALNT6Q8NCL4 622 aa6.08□□□□□ -1.44
HMGB3P26-201ENST00000560051 CADPSQ9ULU8 1353 aa6.07□□□□□ -1.44
HMGB3P26-201ENST00000560051 RNF144AP50876 292 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P26-201ENST00000560051 IRX6P78412 446 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P26-201ENST00000560051 TRIM22Q8IYM9 498 aa6.07□□□□□ -1.44
HMGB3P26-201ENST00000560051 ESF1Q9H501 851 aaKnown RBP6.07□□□□□ -1.44
HMGB3P26-201ENST00000560051 ATP5J2-PTCD1G3V325 749 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 MEN1O00255 615 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 LILRA1O75019 489 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 BCRP11274 1271 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 RHOQP17081 205 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 ADD1P35611 737 aaKnown RBP6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 MCM6Q14566 821 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 SLC27A3Q5K4L6 730 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 NOL8Q76FK4 1167 aaKnown RBP6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 POM121Q96HA1 1249 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 DDRGK1Q96HY6 314 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 NLRP3Q96P20 1036 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 CYLDQ9NQC7 956 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 RIPOR2Q9Y4F9 1068 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 IGF1RP08069 1367 aa6.06□□□□□ -1.44
HMGB3P26-201ENST00000560051 CNTNAP5Q8WYK1 1306 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 GPC1P35052 558 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 GAS6Q14393 721 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 SH3D19Q5HYK7 790 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 CNPY4Q8N129 248 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 IPO4Q8TEX9 1081 aaKnown RBP6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 ZNF837Q96EG3 531 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 DCAF5Q96JK2 942 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 SPATA32Q96LK8 384 aa6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 GAS2L1Q99501 681 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P26-201ENST00000560051 GPR25O00155 361 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 ERCC3P19447 782 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 MX2P20592 715 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 KCNA1Q09470 495 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 PLA2G4EQ3MJ16 856 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 GORABQ5T7V8 394 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 OCSTAMPQ9BR26 566 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 CUEDC1Q9NWM3 386 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 DYRK1BQ9Y463 629 aa6.04□□□□□ -1.44
HMGB3P26-201ENST00000560051 ESPNB1AK53 854 aa6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 SMARCA5O60264 1052 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 RNF20Q5VTR2 975 aa6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 PROCA1Q8NCQ7 364 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 GTPBP3Q969Y2 492 aaKnown RBP6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 LRRC4BQ9NT99 713 aa6.03□□□□□ -1.44
HMGB3P26-201ENST00000560051 ADAM23O75077 832 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 PPP1R15AO75807 674 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 USP17L8P0C7I0 530 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 DBN1Q16643 649 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 KDF1Q8NAX2 398 aaPredicted RBP6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 PRDM10Q9NQV6 1147 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 PCDHB9Q9Y5E1 797 aa6.02□□□□□ -1.45
HMGB3P26-201ENST00000560051 A0A1W2PRU2 124 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 BRD1O95696 1058 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 POU4F2Q12837 409 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 SPTY2D1Q68D10 685 aaPredicted RBP6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 EPS8L1Q8TE68 723 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 GOPCQ9HD26 462 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 PHF24Q9UPV7 400 aa6.01□□□□□ -1.45
HMGB3P26-201ENST00000560051 CALRP27797 417 aaKnown RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 GTF2E1P29083 439 aaPredicted RBP6□□□□□ -1.45
HMGB3P26-201ENST00000560051 MAP2K3P46734 347 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms