RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 ZNF784Q8NCA9 323 aaPredicted RBP28■■■□□ 2.07
TSPAN3-206ENST00000559373 SCN11AQ9UI33 1791 aa28■■■□□ 2.07
TSPAN3-206ENST00000559373 MYH14Q7Z406 1995 aaKnown RBP28■■■□□ 2.07
TSPAN3-206ENST00000559373 COL5A3P25940 1745 aaPredicted RBP27.99■■■□□ 2.07
TSPAN3-206ENST00000559373 FLAD1Q8NFF5 587 aa27.99■■■□□ 2.07
TSPAN3-206ENST00000559373 AMER1Q5JTC6 1135 aaPredicted RBP27.98■■■□□ 2.07
TSPAN3-206ENST00000559373 SULT6B1Q6IMI4 303 aa27.98■■■□□ 2.07
TSPAN3-206ENST00000559373 RBM42Q9BTD8 480 aaKnown RBP27.98■■■□□ 2.07
TSPAN3-206ENST00000559373 KDM6AO15550 1401 aaPredicted RBP27.98■■■□□ 2.07
TSPAN3-206ENST00000559373 GNPATO15228 680 aa27.96■■■□□ 2.07
TSPAN3-206ENST00000559373 YBX3P16989 372 aaKnown RBP eCLIP27.95■■■□□ 2.06
TSPAN3-206ENST00000559373 CC2D1BQ5T0F9 858 aaKnown RBP27.95■■■□□ 2.06
TSPAN3-206ENST00000559373 SLC4A9Q96Q91 983 aa27.95■■■□□ 2.06
TSPAN3-206ENST00000559373 IL13P35225 146 aa27.94■■■□□ 2.06
TSPAN3-206ENST00000559373 DCAF5Q96JK2 942 aa27.94■■■□□ 2.06
TSPAN3-206ENST00000559373 WWC3Q9ULE0 1092 aa27.94■■■□□ 2.06
TSPAN3-206ENST00000559373 ERVV-2B6SEH9 535 aa27.93■■■□□ 2.06
TSPAN3-206ENST00000559373 CABP4P57796 275 aa27.93■■■□□ 2.06
TSPAN3-206ENST00000559373 MTHFSP49914 203 aa27.92■■■□□ 2.06
TSPAN3-206ENST00000559373 ZNF831Q5JPB2 1677 aa27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 HSP90AB1P08238 724 aaKnown RBP27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 HMGB2P26583 209 aaKnown RBP27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 SSFA2P28290 1259 aa27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 AMOTQ4VCS5 1084 aa27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 C1orf141Q5JVX7 400 aa27.91■■■□□ 2.06
TSPAN3-206ENST00000559373 KDRP35968 1356 aa27.9■■■□□ 2.06
TSPAN3-206ENST00000559373 HMOX1P09601 288 aa27.9■■■□□ 2.06
TSPAN3-206ENST00000559373 N4BP2Q86UW6 1770 aaPredicted RBP27.9■■■□□ 2.06
TSPAN3-206ENST00000559373 C4AP0C0L4 1744 aa27.89■■■□□ 2.06
TSPAN3-206ENST00000559373 PER1O15534 1290 aaPredicted RBP27.88■■■□□ 2.05
TSPAN3-206ENST00000559373 PTCD1O75127 700 aaKnown RBP27.88■■■□□ 2.05
TSPAN3-206ENST00000559373 NFATC2IPQ8NCF5 419 aa27.88■■■□□ 2.05
TSPAN3-206ENST00000559373 PLEKHG2Q9H7P9 1386 aa27.87■■■□□ 2.05
TSPAN3-206ENST00000559373 TJP1Q07157 1748 aa27.87■■■□□ 2.05
TSPAN3-206ENST00000559373 CD2APQ9Y5K6 639 aa27.86■■■□□ 2.05
TSPAN3-206ENST00000559373 RTCBQ9Y3I0 505 aaKnown RBP27.84■■■□□ 2.05
TSPAN3-206ENST00000559373 LGR6Q9HBX8 967 aa27.83■■■□□ 2.05
TSPAN3-206ENST00000559373 TRAPPC3LQ5T215 181 aa27.82■■■□□ 2.04
TSPAN3-206ENST00000559373 KIF13BQ9NQT8 1826 aa27.82■■■□□ 2.04
TSPAN3-206ENST00000559373 MMP10P09238 476 aa27.8■■■□□ 2.04
TSPAN3-206ENST00000559373 ARHGEF1Q92888 912 aaKnown RBP27.8■■■□□ 2.04
TSPAN3-206ENST00000559373 KIAA1551Q9HCM1 1747 aa27.8■■■□□ 2.04
TSPAN3-206ENST00000559373 CICQ96RK0 1608 aaPredicted RBP27.79■■■□□ 2.04
TSPAN3-206ENST00000559373 GRIN3BO60391 1043 aa27.79■■■□□ 2.04
TSPAN3-206ENST00000559373 DIAPH1O60610 1272 aaKnown RBP27.78■■■□□ 2.04
TSPAN3-206ENST00000559373 AKAP4Q5JQC9 854 aa27.77■■■□□ 2.04
TSPAN3-206ENST00000559373 CNTNAP4Q9C0A0 1308 aa27.76■■■□□ 2.03
TSPAN3-206ENST00000559373 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
TSPAN3-206ENST00000559373 RC3H1Q5TC82 1133 aaKnown RBP27.76■■■□□ 2.03
TSPAN3-206ENST00000559373 RPS6KA4O75676 772 aa27.75■■■□□ 2.03
TSPAN3-206ENST00000559373 RFC4P35249 363 aa27.75■■■□□ 2.03
TSPAN3-206ENST00000559373 CRKLP46109 303 aaKnown RBP27.75■■■□□ 2.03
TSPAN3-206ENST00000559373 MTHFSDQ2M296 383 aaKnown RBP27.75■■■□□ 2.03
TSPAN3-206ENST00000559373 RNMTO43148 476 aaKnown RBP27.73■■■□□ 2.03
TSPAN3-206ENST00000559373 SLC52A2Q9HAB3 445 aa27.73■■■□□ 2.03
TSPAN3-206ENST00000559373 SRP68Q9UHB9 627 aaKnown RBP27.73■■■□□ 2.03
TSPAN3-206ENST00000559373 BRCA1P38398 1863 aaKnown RBP27.72■■■□□ 2.03
TSPAN3-206ENST00000559373 COL3A1P02461 1466 aaPredicted RBP27.72■■■□□ 2.03
TSPAN3-206ENST00000559373 GYS1P13807 737 aa27.72■■■□□ 2.03
TSPAN3-206ENST00000559373 ADAMTS7Q9UKP4 1686 aa27.72■■■□□ 2.03
TSPAN3-206ENST00000559373 U2SURPO15042 1029 aaKnown RBP27.71■■■□□ 2.03
TSPAN3-206ENST00000559373 DNAJC10Q8IXB1 793 aa27.71■■■□□ 2.03
TSPAN3-206ENST00000559373 NLGN1Q8N2Q7 840 aa27.7■■■□□ 2.02
TSPAN3-206ENST00000559373 ADRA2BP18089 450 aa27.69■■■□□ 2.02
TSPAN3-206ENST00000559373 UBR2Q8IWV8 1755 aa27.68■■■□□ 2.02
TSPAN3-206ENST00000559373 C1QTNF8P60827 252 aa27.68■■■□□ 2.02
TSPAN3-206ENST00000559373 MRC1P22897 1456 aa27.68■■■□□ 2.02
TSPAN3-206ENST00000559373 AFDNP55196 1824 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 A0A0G2JLW4 131 aa27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 INTS5Q6P9B9 1019 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 PXDNLA1KZ92 1463 aa27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 SIPA1L3O60292 1781 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 KCPQ6ZWJ8 1503 aa27.67■■■□□ 2.02
TSPAN3-206ENST00000559373 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
TSPAN3-206ENST00000559373 FKBP8Q14318 412 aa27.65■■■□□ 2.02
TSPAN3-206ENST00000559373 ZNF526Q8TF50 670 aaPredicted RBP27.65■■■□□ 2.02
TSPAN3-206ENST00000559373 PARP3Q9Y6F1 533 aa27.65■■■□□ 2.02
TSPAN3-206ENST00000559373 ATP10DQ9P241 1426 aa27.65■■■□□ 2.02
TSPAN3-206ENST00000559373 NPC1L1Q9UHC9 1359 aa27.64■■■□□ 2.02
TSPAN3-206ENST00000559373 C10orf71Q711Q0 1435 aa27.63■■■□□ 2.01
TSPAN3-206ENST00000559373 SENP3-EIF4A1A0A087X0R7 540 aa27.62■■■□□ 2.01
TSPAN3-206ENST00000559373 CCDC87Q9NVE4 849 aa27.62■■■□□ 2.01
TSPAN3-206ENST00000559373 USP42Q9H9J4 1324 aaKnown RBP27.62■■■□□ 2.01
TSPAN3-206ENST00000559373 DPEP1P16444 411 aa27.61■■■□□ 2.01
TSPAN3-206ENST00000559373 BCS1LQ9Y276 419 aa27.61■■■□□ 2.01
TSPAN3-206ENST00000559373 ARFGEF1Q9Y6D6 1849 aa27.6■■■□□ 2.01
TSPAN3-206ENST00000559373 CYP19A1P11511 503 aaPredicted RBP27.6■■■□□ 2.01
TSPAN3-206ENST00000559373 DDR1Q08345 913 aa27.59■■■□□ 2.01
TSPAN3-206ENST00000559373 USPL1Q5W0Q7 1092 aa27.59■■■□□ 2.01
TSPAN3-206ENST00000559373 TGFB2P61812 414 aa27.58■■■□□ 2.01
TSPAN3-206ENST00000559373 IL17REQ8NFR9 667 aa27.58■■■□□ 2.01
TSPAN3-206ENST00000559373 ZBTB1Q9Y2K1 713 aa27.58■■■□□ 2.01
TSPAN3-206ENST00000559373 SOS1Q07889 1333 aaPredicted RBP27.57■■■□□ 2
TSPAN3-206ENST00000559373 PHACTR3Q96KR7 559 aa27.56■■■□□ 2
TSPAN3-206ENST00000559373 GNAT3A8MTJ3 354 aa27.55■■■□□ 2
TSPAN3-206ENST00000559373 ZPR1O75312 459 aa27.55■■■□□ 2
TSPAN3-206ENST00000559373 ADCY9O60503 1353 aa27.55■■■□□ 2
TSPAN3-206ENST00000559373 FCHSD2O94868 740 aa27.54■■■□□ 2
TSPAN3-206ENST00000559373 KCNA3P22001 575 aa27.54■■■□□ 2
TSPAN3-206ENST00000559373 CANXP27824 592 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms