RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 IQCEQ6IPM2 695 aa14.07□□□□□ -0.16
NEK9-210ENST00000557026 STXBP4Q6ZWJ1 553 aa14.07□□□□□ -0.16
NEK9-210ENST00000557026 PLCH2O75038 1416 aa14.07□□□□□ -0.16
NEK9-210ENST00000557026 IL16Q14005 1332 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 C14orf93Q9H972 538 aaKnown RBP14.06□□□□□ -0.16
NEK9-210ENST00000557026 PLEKHH1Q9ULM0 1364 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 CTCFLQ8NI51 663 aaPredicted RBP14.06□□□□□ -0.16
NEK9-210ENST00000557026 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
NEK9-210ENST00000557026 NOB1Q9ULX3 412 aaKnown RBP14.06□□□□□ -0.16
NEK9-210ENST00000557026 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 CCDC39Q9UFE4 941 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 NUP160Q12769 1436 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
NEK9-210ENST00000557026 UBAP1LF5GYI3 381 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
NEK9-210ENST00000557026 MKNK2Q9HBH9 465 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 ABCC10Q5T3U5 1492 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
NEK9-210ENST00000557026 NEK4P51957 841 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 CCDC150Q8NCX0 1101 aa14.05□□□□□ -0.16
NEK9-210ENST00000557026 BCL11BQ9C0K0 894 aaPredicted RBP14.05□□□□□ -0.16
NEK9-210ENST00000557026 BAG4O95429 457 aaKnown RBP14.04□□□□□ -0.16
NEK9-210ENST00000557026 KIF5BP33176 963 aa14.04□□□□□ -0.16
NEK9-210ENST00000557026 RFC4P35249 363 aa14.04□□□□□ -0.16
NEK9-210ENST00000557026 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
NEK9-210ENST00000557026 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
NEK9-210ENST00000557026 FKBP4Q02790 459 aaKnown RBP eCLIP14.04□□□□□ -0.16
NEK9-210ENST00000557026 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.04□□□□□ -0.16
NEK9-210ENST00000557026 LRRC59Q96AG4 307 aaKnown RBP14.04□□□□□ -0.16
NEK9-210ENST00000557026 KDM5BQ9UGL1 1544 aa14.04□□□□□ -0.16
NEK9-210ENST00000557026 SMTNL1A8MU46 457 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 SNRPA1P09661 255 aaKnown RBP14.03□□□□□ -0.16
NEK9-210ENST00000557026 DUSP27Q5VZP5 1158 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 PPFIBP1Q86W92 1011 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 PANK1Q8TE04 598 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
NEK9-210ENST00000557026 CCDC152Q4G0S7 254 aa14.03□□□□□ -0.16
NEK9-210ENST00000557026 GTPBP4Q9BZE4 634 aaKnown RBP14.03□□□□□ -0.16
NEK9-210ENST00000557026 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
NEK9-210ENST00000557026 PTPN23Q9H3S7 1636 aa14.02□□□□□ -0.16
NEK9-210ENST00000557026 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.16
NEK9-210ENST00000557026 NEBLO76041 1014 aa14.02□□□□□ -0.16
NEK9-210ENST00000557026 TTLL12Q14166 644 aaPredicted RBP14.02□□□□□ -0.16
NEK9-210ENST00000557026 HOOK2Q96ED9 719 aa14.02□□□□□ -0.16
NEK9-210ENST00000557026 NAPBQ9H115 298 aa14.02□□□□□ -0.16
NEK9-210ENST00000557026 A2MP01023 1474 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 EYA3Q99504 573 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 C19orf44Q9H6X5 657 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 IDI1Q13907 227 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 DNAAF4Q8WXU2 420 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 TSG101Q99816 390 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 NAIPQ13075 1403 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 WDR7Q9Y4E6 1490 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 TRPM2O94759 1503 aa14.02□□□□□ -0.17
NEK9-210ENST00000557026 SLC4A3P48751 1232 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 PDE4BQ07343 736 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 MTERF4Q7Z6M4 381 aaKnown RBP14.01□□□□□ -0.17
NEK9-210ENST00000557026 CWC25Q9NXE8 425 aaPredicted RBP14.01□□□□□ -0.17
NEK9-210ENST00000557026 PIK3R4Q99570 1358 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 ABCC5O15440 1437 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 PLCG2P16885 1265 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 MTMR7Q9Y216 660 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 IDH1O75874 414 aaKnown RBP14.01□□□□□ -0.17
NEK9-210ENST00000557026 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 ZFYP08048 801 aaPredicted RBP14.01□□□□□ -0.17
NEK9-210ENST00000557026 CCDC192P0DO97 292 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 TMEM87AQ8NBN3 555 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 KIF4AO95239 1232 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 CERS3Q8IU89 383 aa14.01□□□□□ -0.17
NEK9-210ENST00000557026 RBM27Q9P2N5 1060 aaKnown RBP14□□□□□ -0.17
NEK9-210ENST00000557026 FANCIQ9NVI1 1328 aa14□□□□□ -0.17
NEK9-210ENST00000557026 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
NEK9-210ENST00000557026 CETN1Q12798 172 aa14□□□□□ -0.17
NEK9-210ENST00000557026 BICDL1Q6ZP65 573 aa14□□□□□ -0.17
NEK9-210ENST00000557026 VPS36Q86VN1 386 aa14□□□□□ -0.17
NEK9-210ENST00000557026 BICRAQ9NZM4 1560 aa14□□□□□ -0.17
NEK9-210ENST00000557026 PDRG1Q9NUG6 133 aa14□□□□□ -0.17
NEK9-210ENST00000557026 PPIP5K1Q6PFW1 1433 aa14□□□□□ -0.17
NEK9-210ENST00000557026 ASXL2Q76L83 1435 aa14□□□□□ -0.17
NEK9-210ENST00000557026 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 CHD1LQ86WJ1 897 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 PDZRN3Q9UPQ7 1066 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 FOXO3O43524 673 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 BMP15O95972 392 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 GNAQP50148 359 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 GSE1Q14687 1217 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 MRE11P49959 708 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 ABCF2Q9UG63 623 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 EZRP15311 586 aaKnown RBP13.99□□□□□ -0.17
NEK9-210ENST00000557026 USP37Q86T82 979 aa13.99□□□□□ -0.17
NEK9-210ENST00000557026 ZNF397Q8NF99 534 aaPredicted RBP13.99□□□□□ -0.17
NEK9-210ENST00000557026 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
NEK9-210ENST00000557026 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
NEK9-210ENST00000557026 FERMT2Q96AC1 680 aa13.98□□□□□ -0.17
NEK9-210ENST00000557026 DEF6Q9H4E7 631 aa13.98□□□□□ -0.17
NEK9-210ENST00000557026 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms