RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ITPK1Q13572 414 aa25.76■■□□□ 1.71
CDKN3-209ENST00000556102 PLEKHO1Q53GL0 409 aaPredicted RBP25.76■■□□□ 1.71
CDKN3-209ENST00000556102 KNSTRNQ9Y448 316 aa25.76■■□□□ 1.71
CDKN3-209ENST00000556102 YBX3P16989 372 aaKnown RBP eCLIP25.75■■□□□ 1.711e-6■■□□□ 14.5
CDKN3-209ENST00000556102 SMIM5Q71RC9 77 aa25.75■■□□□ 1.71
CDKN3-209ENST00000556102 DCAF5Q96JK2 942 aa25.75■■□□□ 1.71
CDKN3-209ENST00000556102 ZNF831Q5JPB2 1677 aa25.74■■□□□ 1.71
CDKN3-209ENST00000556102 KDRP35968 1356 aa25.73■■□□□ 1.71
CDKN3-209ENST00000556102 GNPATO15228 680 aa25.73■■□□□ 1.71
CDKN3-209ENST00000556102 AMOTQ4VCS5 1084 aa25.73■■□□□ 1.71
CDKN3-209ENST00000556102 ZNF530Q6P9A1 599 aaPredicted RBP25.73■■□□□ 1.71
CDKN3-209ENST00000556102 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
CDKN3-209ENST00000556102 AEBP1Q8IUX7 1158 aa25.71■■□□□ 1.71
CDKN3-209ENST00000556102 COL5A3P25940 1745 aaPredicted RBP25.68■■□□□ 1.7
CDKN3-209ENST00000556102 AMER1Q5JTC6 1135 aaPredicted RBP25.68■■□□□ 1.7
CDKN3-209ENST00000556102 SLC4A9Q96Q91 983 aa25.68■■□□□ 1.7
CDKN3-209ENST00000556102 RBM42Q9BTD8 480 aaKnown RBP25.68■■□□□ 1.7
CDKN3-209ENST00000556102 CABP4P57796 275 aa25.67■■□□□ 1.7
CDKN3-209ENST00000556102 C1orf141Q5JVX7 400 aa25.67■■□□□ 1.7
CDKN3-209ENST00000556102 SULT6B1Q6IMI4 303 aa25.67■■□□□ 1.7
CDKN3-209ENST00000556102 KIF7Q2M1P5 1343 aa25.66■■□□□ 1.7
CDKN3-209ENST00000556102 IL13P35225 146 aa25.66■■□□□ 1.7
CDKN3-209ENST00000556102 MTHFSP49914 203 aa25.66■■□□□ 1.7
CDKN3-209ENST00000556102 RTCBQ9Y3I0 505 aaKnown RBP25.65■■□□□ 1.7
CDKN3-209ENST00000556102 RC3H1Q5TC82 1133 aaKnown RBP25.64■■□□□ 1.7
CDKN3-209ENST00000556102 CNTNAP4Q9C0A0 1308 aa25.63■■□□□ 1.69
CDKN3-209ENST00000556102 C1QTNF8P60827 252 aa25.63■■□□□ 1.69
CDKN3-209ENST00000556102 SCN11AQ9UI33 1791 aa25.63■■□□□ 1.69
CDKN3-209ENST00000556102 MYH14Q7Z406 1995 aaKnown RBP25.62■■□□□ 1.69
CDKN3-209ENST00000556102 TRAPPC3LQ5T215 181 aa25.62■■□□□ 1.69
CDKN3-209ENST00000556102 ADRA2BP18089 450 aa25.61■■□□□ 1.69
CDKN3-209ENST00000556102 GIGYF1O75420 1035 aaPredicted RBP25.6■■□□□ 1.69
CDKN3-209ENST00000556102 MMP10P09238 476 aa25.6■■□□□ 1.69
CDKN3-209ENST00000556102 KIF13BQ9NQT8 1826 aa25.6■■□□□ 1.69
CDKN3-209ENST00000556102 NFATC2IPQ8NCF5 419 aa25.59■■□□□ 1.69
CDKN3-209ENST00000556102 RPS6KA4O75676 772 aa25.58■■□□□ 1.69
CDKN3-209ENST00000556102 NLGN1Q8N2Q7 840 aa25.58■■□□□ 1.69
CDKN3-209ENST00000556102 ARHGEF1Q92888 912 aaKnown RBP25.58■■□□□ 1.69
CDKN3-209ENST00000556102 CICQ96RK0 1608 aaPredicted RBP25.58■■□□□ 1.69
CDKN3-209ENST00000556102 C4AP0C0L4 1744 aa25.57■■□□□ 1.68
CDKN3-209ENST00000556102 PER1O15534 1290 aaPredicted RBP25.57■■□□□ 1.68
CDKN3-209ENST00000556102 PTCD1O75127 700 aaKnown RBP25.57■■□□□ 1.68
CDKN3-209ENST00000556102 AKAP4Q5JQC9 854 aa25.56■■□□□ 1.68
CDKN3-209ENST00000556102 TJP1Q07157 1748 aa25.56■■□□□ 1.68
CDKN3-209ENST00000556102 VIRMAQ69YN4 1812 aaKnown RBP25.56■■□□□ 1.68
CDKN3-209ENST00000556102 ATP10DQ9P241 1426 aa25.55■■□□□ 1.68
CDKN3-209ENST00000556102 RFC4P35249 363 aa25.55■■□□□ 1.68
CDKN3-209ENST00000556102 WWC3Q9ULE0 1092 aa25.55■■□□□ 1.68
CDKN3-209ENST00000556102 KIAA1551Q9HCM1 1747 aa25.54■■□□□ 1.68
CDKN3-209ENST00000556102 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
CDKN3-209ENST00000556102 GYS1P13807 737 aa25.54■■□□□ 1.68
CDKN3-209ENST00000556102 CRKLP46109 303 aaKnown RBP25.53■■□□□ 1.68
CDKN3-209ENST00000556102 ADCY9O60503 1353 aa25.53■■□□□ 1.68
CDKN3-209ENST00000556102 PXDNLA1KZ92 1463 aa25.53■■□□□ 1.68
CDKN3-209ENST00000556102 N4BP2Q86UW6 1770 aaPredicted RBP25.52■■□□□ 1.68
CDKN3-209ENST00000556102 C10orf71Q711Q0 1435 aa25.52■■□□□ 1.68
CDKN3-209ENST00000556102 MRC1P22897 1456 aa25.52■■□□□ 1.68
CDKN3-209ENST00000556102 HMOX1P09601 288 aa25.51■■□□□ 1.67
CDKN3-209ENST00000556102 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
CDKN3-209ENST00000556102 DIAPH1O60610 1272 aaKnown RBP25.5■■□□□ 1.67
CDKN3-209ENST00000556102 TGFB2P61812 414 aa25.5■■□□□ 1.67
CDKN3-209ENST00000556102 SLC52A2Q9HAB3 445 aa25.5■■□□□ 1.67
CDKN3-209ENST00000556102 CCDC87Q9NVE4 849 aa25.5■■□□□ 1.67
CDKN3-209ENST00000556102 PARP3Q9Y6F1 533 aa25.49■■□□□ 1.67
CDKN3-209ENST00000556102 ADAMTS7Q9UKP4 1686 aa25.48■■□□□ 1.67
CDKN3-209ENST00000556102 NPC1L1Q9UHC9 1359 aa25.48■■□□□ 1.67
CDKN3-209ENST00000556102 RNMTO43148 476 aaKnown RBP25.48■■□□□ 1.67
CDKN3-209ENST00000556102 LGR6Q9HBX8 967 aa25.48■■□□□ 1.67
CDKN3-209ENST00000556102 USP42Q9H9J4 1324 aaKnown RBP25.46■■□□□ 1.67
CDKN3-209ENST00000556102 GPBP1L1Q9HC44 474 aaPredicted RBP25.46■■□□□ 1.67
CDKN3-209ENST00000556102 BRCA1P38398 1863 aaKnown RBP25.45■■□□□ 1.67
CDKN3-209ENST00000556102 MTHFSDQ2M296 383 aaKnown RBP25.45■■□□□ 1.66
CDKN3-209ENST00000556102 INTS5Q6P9B9 1019 aaKnown RBP25.45■■□□□ 1.66
CDKN3-209ENST00000556102 SRP68Q9UHB9 627 aaKnown RBP25.45■■□□□ 1.66
CDKN3-209ENST00000556102 A0A0G2JLW4 131 aa25.44■■□□□ 1.66
CDKN3-209ENST00000556102 DNAJC10Q8IXB1 793 aa25.44■■□□□ 1.66
CDKN3-209ENST00000556102 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
CDKN3-209ENST00000556102 KCPQ6ZWJ8 1503 aa25.43■■□□□ 1.66
CDKN3-209ENST00000556102 DPEP1P16444 411 aa25.42■■□□□ 1.66
CDKN3-209ENST00000556102 SLC39A6Q13433 755 aa25.42■■□□□ 1.66
CDKN3-209ENST00000556102 FKBP8Q14318 412 aa25.42■■□□□ 1.66
CDKN3-209ENST00000556102 BCS1LQ9Y276 419 aa25.42■■□□□ 1.66
CDKN3-209ENST00000556102 ZNF526Q8TF50 670 aaPredicted RBP25.41■■□□□ 1.66
CDKN3-209ENST00000556102 UBR2Q8IWV8 1755 aa25.4■■□□□ 1.66
CDKN3-209ENST00000556102 SOS1Q07889 1333 aaPredicted RBP25.39■■□□□ 1.66
CDKN3-209ENST00000556102 CYP19A1P11511 503 aaPredicted RBP25.39■■□□□ 1.66
CDKN3-209ENST00000556102 DDR1Q08345 913 aa25.39■■□□□ 1.66
CDKN3-209ENST00000556102 ARFGEF1Q9Y6D6 1849 aa25.39■■□□□ 1.65
CDKN3-209ENST00000556102 CNGB1Q14028 1251 aaPredicted RBP25.38■■□□□ 1.65
CDKN3-209ENST00000556102 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
CDKN3-209ENST00000556102 ZPR1O75312 459 aa25.37■■□□□ 1.65
CDKN3-209ENST00000556102 FCHSD2O94868 740 aa25.37■■□□□ 1.65
CDKN3-209ENST00000556102 VSIG10Q8N0Z9 540 aa25.37■■□□□ 1.65
CDKN3-209ENST00000556102 COL15A1P39059 1388 aa25.35■■□□□ 1.65
CDKN3-209ENST00000556102 KCNA3P22001 575 aa25.35■■□□□ 1.65
CDKN3-209ENST00000556102 TM4SF1P30408 202 aa25.35■■□□□ 1.65
CDKN3-209ENST00000556102 USPL1Q5W0Q7 1092 aa25.35■■□□□ 1.65
CDKN3-209ENST00000556102 POLRMTO00411 1230 aaKnown RBP25.34■■□□□ 1.65
CDKN3-209ENST00000556102 ARHGAP27Q6ZUM4 889 aa25.34■■□□□ 1.65
CDKN3-209ENST00000556102 GAS2L2Q8NHY3 880 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms