RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SCN11AQ9UI33 1791 aa26.95■■□□□ 1.9
PRKCH-219ENST00000555906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.95■■□□□ 1.9
PRKCH-219ENST00000555906 ERVV-2B6SEH9 535 aa26.95■■□□□ 1.9
PRKCH-219ENST00000555906 AMOTQ4VCS5 1084 aa26.95■■□□□ 1.9
PRKCH-219ENST00000555906 AMER1Q5JTC6 1135 aaPredicted RBP26.95■■□□□ 1.9
PRKCH-219ENST00000555906 DCAF5Q96JK2 942 aa26.95■■□□□ 1.9
PRKCH-219ENST00000555906 CICQ96RK0 1608 aaPredicted RBP26.94■■□□□ 1.9
PRKCH-219ENST00000555906 PHF14O94880 888 aa26.94■■□□□ 1.9
PRKCH-219ENST00000555906 ITPK1Q13572 414 aa26.94■■□□□ 1.9
PRKCH-219ENST00000555906 ZNF530Q6P9A1 599 aaPredicted RBP26.93■■□□□ 1.9
PRKCH-219ENST00000555906 PELP1Q8IZL8 1130 aaKnown RBP26.93■■□□□ 1.9
PRKCH-219ENST00000555906 ATP6V1AP38606 617 aa26.92■■□□□ 1.9
PRKCH-219ENST00000555906 AEBP1Q8IUX7 1158 aa26.92■■□□□ 1.9
PRKCH-219ENST00000555906 CD2APQ9Y5K6 639 aa26.92■■□□□ 1.9
PRKCH-219ENST00000555906 VIRMAQ69YN4 1812 aaKnown RBP26.92■■□□□ 1.9
PRKCH-219ENST00000555906 GNPATO15228 680 aa26.9■■□□□ 1.9
PRKCH-219ENST00000555906 C4AP0C0L4 1744 aa26.89■■□□□ 1.9
PRKCH-219ENST00000555906 IL13P35225 146 aa26.88■■□□□ 1.89
PRKCH-219ENST00000555906 C1orf141Q5JVX7 400 aa26.88■■□□□ 1.89
PRKCH-219ENST00000555906 KIF13BQ9NQT8 1826 aa26.88■■□□□ 1.89
PRKCH-219ENST00000555906 YBX3P16989 372 aaKnown RBP eCLIP26.87■■□□□ 1.89
PRKCH-219ENST00000555906 SULT6B1Q6IMI4 303 aa26.87■■□□□ 1.89
PRKCH-219ENST00000555906 SMIM5Q71RC9 77 aa26.87■■□□□ 1.89
PRKCH-219ENST00000555906 TJP1Q07157 1748 aa26.87■■□□□ 1.89
PRKCH-219ENST00000555906 MYH14Q7Z406 1995 aaKnown RBP26.86■■□□□ 1.89
PRKCH-219ENST00000555906 GRIN3BO60391 1043 aa26.86■■□□□ 1.89
PRKCH-219ENST00000555906 CABP4P57796 275 aa26.85■■□□□ 1.89
PRKCH-219ENST00000555906 SLC4A9Q96Q91 983 aa26.85■■□□□ 1.89
PRKCH-219ENST00000555906 MRC1P22897 1456 aa26.85■■□□□ 1.89
PRKCH-219ENST00000555906 MTHFSP49914 203 aa26.84■■□□□ 1.89
PRKCH-219ENST00000555906 CNTNAP4Q9C0A0 1308 aa26.84■■□□□ 1.89
PRKCH-219ENST00000555906 ADAMTS7Q9UKP4 1686 aa26.83■■□□□ 1.89
PRKCH-219ENST00000555906 RBM42Q9BTD8 480 aaKnown RBP26.83■■□□□ 1.89
PRKCH-219ENST00000555906 KIAA1551Q9HCM1 1747 aa26.82■■□□□ 1.88
PRKCH-219ENST00000555906 PER1O15534 1290 aaPredicted RBP26.81■■□□□ 1.88
PRKCH-219ENST00000555906 RC3H1Q5TC82 1133 aaKnown RBP26.81■■□□□ 1.88
PRKCH-219ENST00000555906 RTCBQ9Y3I0 505 aaKnown RBP26.81■■□□□ 1.88
PRKCH-219ENST00000555906 NPC1L1Q9UHC9 1359 aa26.81■■□□□ 1.88
PRKCH-219ENST00000555906 ADRA2BP18089 450 aa26.8■■□□□ 1.88
PRKCH-219ENST00000555906 AKAP4Q5JQC9 854 aa26.78■■□□□ 1.88
PRKCH-219ENST00000555906 COL3A1P02461 1466 aaPredicted RBP26.78■■□□□ 1.88
PRKCH-219ENST00000555906 TRAPPC3LQ5T215 181 aa26.77■■□□□ 1.88
PRKCH-219ENST00000555906 NFATC2IPQ8NCF5 419 aa26.76■■□□□ 1.87
PRKCH-219ENST00000555906 MMP10P09238 476 aa26.75■■□□□ 1.87
PRKCH-219ENST00000555906 CC2D1BQ5T0F9 858 aaKnown RBP26.75■■□□□ 1.87
PRKCH-219ENST00000555906 C10orf71Q711Q0 1435 aa26.74■■□□□ 1.87
PRKCH-219ENST00000555906 RPS6KA4O75676 772 aa26.74■■□□□ 1.87
PRKCH-219ENST00000555906 PXDNLA1KZ92 1463 aa26.74■■□□□ 1.87
PRKCH-219ENST00000555906 N4BP2Q86UW6 1770 aaPredicted RBP26.74■■□□□ 1.87
PRKCH-219ENST00000555906 UBR2Q8IWV8 1755 aa26.74■■□□□ 1.87
PRKCH-219ENST00000555906 PTCD1O75127 700 aaKnown RBP26.73■■□□□ 1.87
PRKCH-219ENST00000555906 BRCA1P38398 1863 aaKnown RBP26.72■■□□□ 1.87
PRKCH-219ENST00000555906 DIAPH1O60610 1272 aaKnown RBP26.72■■□□□ 1.87
PRKCH-219ENST00000555906 NLGN1Q8N2Q7 840 aa26.72■■□□□ 1.87
PRKCH-219ENST00000555906 ARHGEF1Q92888 912 aaKnown RBP26.72■■□□□ 1.87
PRKCH-219ENST00000555906 KCPQ6ZWJ8 1503 aa26.71■■□□□ 1.87
PRKCH-219ENST00000555906 HMOX1P09601 288 aa26.71■■□□□ 1.87
PRKCH-219ENST00000555906 SLC52A2Q9HAB3 445 aa26.71■■□□□ 1.87
PRKCH-219ENST00000555906 ADCY9O60503 1353 aa26.71■■□□□ 1.87
PRKCH-219ENST00000555906 RFC4P35249 363 aa26.7■■□□□ 1.86
PRKCH-219ENST00000555906 GYS1P13807 737 aa26.69■■□□□ 1.86
PRKCH-219ENST00000555906 CRKLP46109 303 aaKnown RBP26.69■■□□□ 1.86
PRKCH-219ENST00000555906 C1QTNF8P60827 252 aa26.69■■□□□ 1.86
PRKCH-219ENST00000555906 ATP10DQ9P241 1426 aa26.69■■□□□ 1.86
PRKCH-219ENST00000555906 GIGYF1O75420 1035 aaPredicted RBP26.68■■□□□ 1.86
PRKCH-219ENST00000555906 RNMTO43148 476 aaKnown RBP26.67■■□□□ 1.86
PRKCH-219ENST00000555906 SIPA1L3O60292 1781 aaPredicted RBP26.66■■□□□ 1.86
PRKCH-219ENST00000555906 USP42Q9H9J4 1324 aaKnown RBP26.65■■□□□ 1.86
PRKCH-219ENST00000555906 MTHFSDQ2M296 383 aaKnown RBP26.65■■□□□ 1.86
PRKCH-219ENST00000555906 LGR6Q9HBX8 967 aa26.65■■□□□ 1.86
PRKCH-219ENST00000555906 TGFB2P61812 414 aa26.64■■□□□ 1.86
PRKCH-219ENST00000555906 CCDC87Q9NVE4 849 aa26.64■■□□□ 1.86
PRKCH-219ENST00000555906 WWC3Q9ULE0 1092 aa26.64■■□□□ 1.86
PRKCH-219ENST00000555906 ARFGEF1Q9Y6D6 1849 aa26.63■■□□□ 1.85
PRKCH-219ENST00000555906 PARP3Q9Y6F1 533 aa26.62■■□□□ 1.85
PRKCH-219ENST00000555906 INTS5Q6P9B9 1019 aaKnown RBP26.61■■□□□ 1.85
PRKCH-219ENST00000555906 DNAJC10Q8IXB1 793 aa26.6■■□□□ 1.85
PRKCH-219ENST00000555906 SRP68Q9UHB9 627 aaKnown RBP26.59■■□□□ 1.85
PRKCH-219ENST00000555906 SOS1Q07889 1333 aaPredicted RBP26.59■■□□□ 1.85
PRKCH-219ENST00000555906 SLC39A6Q13433 755 aa26.58■■□□□ 1.85
PRKCH-219ENST00000555906 NRXN2Q9P2S2 1712 aa26.57■■□□□ 1.84
PRKCH-219ENST00000555906 SENP3-EIF4A1A0A087X0R7 540 aa26.57■■□□□ 1.84
PRKCH-219ENST00000555906 U2SURPO15042 1029 aaKnown RBP26.57■■□□□ 1.84
PRKCH-219ENST00000555906 VSIG10Q8N0Z9 540 aa26.57■■□□□ 1.84
PRKCH-219ENST00000555906 AFDNP55196 1824 aaKnown RBP26.57■■□□□ 1.84
PRKCH-219ENST00000555906 CYP19A1P11511 503 aaPredicted RBP26.56■■□□□ 1.84
PRKCH-219ENST00000555906 CNGB1Q14028 1251 aaPredicted RBP26.56■■□□□ 1.84
PRKCH-219ENST00000555906 FKBP8Q14318 412 aa26.56■■□□□ 1.84
PRKCH-219ENST00000555906 GAS2L2Q8NHY3 880 aa26.56■■□□□ 1.84
PRKCH-219ENST00000555906 COL15A1P39059 1388 aa26.56■■□□□ 1.84
PRKCH-219ENST00000555906 SCN7AQ01118 1682 aa26.54■■□□□ 1.84
PRKCH-219ENST00000555906 A0A0G2JLW4 131 aa26.54■■□□□ 1.84
PRKCH-219ENST00000555906 DDR1Q08345 913 aa26.54■■□□□ 1.84
PRKCH-219ENST00000555906 GPBP1L1Q9HC44 474 aaPredicted RBP26.54■■□□□ 1.84
PRKCH-219ENST00000555906 DPEP1P16444 411 aa26.53■■□□□ 1.84
PRKCH-219ENST00000555906 BCS1LQ9Y276 419 aa26.53■■□□□ 1.84
PRKCH-219ENST00000555906 DLEC1Q9Y238 1755 aa26.53■■□□□ 1.84
PRKCH-219ENST00000555906 CFAP53Q96M91 514 aa26.52■■□□□ 1.84
PRKCH-219ENST00000555906 ZBTB1Q9Y2K1 713 aa26.52■■□□□ 1.84
PRKCH-219ENST00000555906 GNAT3A8MTJ3 354 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms